| GenBank top hits | e value | %identity | Alignment |
|---|
| CAN77602.1 hypothetical protein VITISV_024474 [Vitis vinifera] | 1.1e-40 | 78.26 | Show/hide |
Query: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
M+DEMESLH NH+F+L KL KGK ALKN+ VYR+K EEHTS+PRYKAR VVKGF+QKKGI FDE F P+VKMSSIRV LGLAA+L LE++QMDVKTAFLH
Subjt: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
Query: RNLDKEIYMEQPKGF
NLDKEIYMEQP+GF
Subjt: RNLDKEIYMEQPKGF
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| KAA0040427.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.2e-41 | 81.74 | Show/hide |
Query: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
MKDEM+SLH NHTF+L KL KGKTAL+NK VYRIK EEHTSKPRYKAR VVKGF+QKK I FDE FAP+VKMSSIRV LGLAA+L LEVEQMDVKTAFLH
Subjt: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
Query: RNLDKEIYMEQPKGF
+LDKEIYMEQP F
Subjt: RNLDKEIYMEQPKGF
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| KAA0065507.1 putative retrotransposon [Cucumis melo var. makuwa] | 7.6e-55 | 98.26 | Show/hide |
Query: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
MKDEMESLHVNHTFKL KLLKGKTALKNKCVYRIKHEEHTSKPRYK RFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
Subjt: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
Query: RNLDKEIYMEQPKGF
RNLDKEIYMEQPKGF
Subjt: RNLDKEIYMEQPKGF
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| RVW85908.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.8e-40 | 77.39 | Show/hide |
Query: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
M+DEMESLH NH+F+L KL KGK ALKN+ VYR+K EEHTS+PRYKAR VVKGF+QKKGI FDE F+P+VKMSSIRV LGLAA+L LE++QMDVKTAFLH
Subjt: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
Query: RNLDKEIYMEQPKGF
+LDKEIYMEQP+GF
Subjt: RNLDKEIYMEQPKGF
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| TYJ98688.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.2e-41 | 81.74 | Show/hide |
Query: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
MKDEM+SLH NHTF+L KL KGKTAL+NK VYRIK EEHTSKPRYKAR VVKGF+QKK I FDE FAP+VKMSSIRV LGLAA+L LEVEQMDVKTAFLH
Subjt: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
Query: RNLDKEIYMEQPKGF
+LDKEIYMEQP F
Subjt: RNLDKEIYMEQPKGF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438HN89 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.8e-41 | 77.39 | Show/hide |
Query: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
M+DEMESLH NH+F+L KL KGK ALKN+ VYR+K EEHTS+PRYKAR VVKGF+QKKGI FDE F+P+VKMSSIRV LGLAA+L LE++QMDVKTAFLH
Subjt: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
Query: RNLDKEIYMEQPKGF
+LDKEIYMEQP+GF
Subjt: RNLDKEIYMEQPKGF
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| A0A5A7TFU1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-41 | 81.74 | Show/hide |
Query: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
MKDEM+SLH NHTF+L KL KGKTAL+NK VYRIK EEHTSKPRYKAR VVKGF+QKK I FDE FAP+VKMSSIRV LGLAA+L LEVEQMDVKTAFLH
Subjt: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
Query: RNLDKEIYMEQPKGF
+LDKEIYMEQP F
Subjt: RNLDKEIYMEQPKGF
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| A0A5D3BKF7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.0e-41 | 81.74 | Show/hide |
Query: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
MKDEM+SLH NHTF+L KL KGKTAL+NK VYRIK EEHTSKPRYKAR VVKGF+QKK I FDE FAP+VKMSSIRV LGLAA+L LEVEQMDVKTAFLH
Subjt: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
Query: RNLDKEIYMEQPKGF
+LDKEIYMEQP F
Subjt: RNLDKEIYMEQPKGF
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| A0A5D3C9T7 Putative retrotransposon | 3.7e-55 | 98.26 | Show/hide |
Query: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
MKDEMESLHVNHTFKL KLLKGKTALKNKCVYRIKHEEHTSKPRYK RFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
Subjt: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
Query: RNLDKEIYMEQPKGF
RNLDKEIYMEQPKGF
Subjt: RNLDKEIYMEQPKGF
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| A5C540 Integrase catalytic domain-containing protein | 5.2e-41 | 78.26 | Show/hide |
Query: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
M+DEMESLH NH+F+L KL KGK ALKN+ VYR+K EEHTS+PRYKAR VVKGF+QKKGI FDE F P+VKMSSIRV LGLAA+L LE++QMDVKTAFLH
Subjt: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
Query: RNLDKEIYMEQPKGF
NLDKEIYMEQP+GF
Subjt: RNLDKEIYMEQPKGF
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.5e-16 | 41.44 | Show/hide |
Query: EMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLHRNL
E+ + +N+T+ + K + K + ++ V+ +K+ E + RYKAR V +GF+QK I ++E FAP+ ++SS R L L L+V QMDVKTAFL+ L
Subjt: EMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLHRNL
Query: DKEIYMEQPKG
+EIYM P+G
Subjt: DKEIYMEQPKG
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.7e-31 | 63.48 | Show/hide |
Query: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
M++EMESL N T+KL +L KGK LK K V+++K + RYKAR VVKGF QKKGI FDE F+P+VKM+SIR L LAA+L LEVEQ+DVKTAFLH
Subjt: MKDEMESLHVNHTFKL-KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFLH
Query: RNLDKEIYMEQPKGF
+L++EIYMEQP+GF
Subjt: RNLDKEIYMEQPKGF
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.2e-13 | 36.21 | Show/hide |
Query: MKDEMESLHVNHTFKL--KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFL
M E+ + NHT+ L T + + ++ K+ S RYKAR V KG++Q+ G+ + E F+P++K +SIR+ LG+A + + Q+DV AFL
Subjt: MKDEMESLHVNHTFKL--KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFL
Query: HRNLDKEIYMEQPKGF
L ++YM QP GF
Subjt: HRNLDKEIYMEQPKGF
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.9e-14 | 37.07 | Show/hide |
Query: MKDEMESLHVNHTFKL--KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFL
M E+ + NHT+ L T + + ++ K S RYKAR V KG++Q+ G+ + E F+P++K +SIR+ LG+A + + Q+DV AFL
Subjt: MKDEMESLHVNHTFKL--KLLKGKTALKNKCVYRIKHEEHTSKPRYKARFVVKGFSQKKGIGFDENFAPIVKMSSIRVGLGLAANLGLEVEQMDVKTAFL
Query: HRNLDKEIYMEQPKGF
L E+YM QP GF
Subjt: HRNLDKEIYMEQPKGF
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