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Cmc04g0107751 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0107751
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionProtein TAPETUM DETERMINANT 1
Genome locationCMiso1.1chr04:26252776..26253651
RNA-Seq ExpressionCmc04g0107751
SyntenyCmc04g0107751
Gene Ontology termsGO:0032502 - developmental process (biological process)
InterPro domainsIPR040361 - Tapetum determinant 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESQ54814.1 hypothetical protein EUTSA_v10027160mg, partial [Eutrema salsugineum]2.1e-2554.46Show/hide
Query:  KNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFPLSISSFK
        + C G+ + ++Q   + M NGIP YRV+ITNQC   C I  +H+ CG FSS+  INPR+FKR+  DDCLVNNG P+ YG TLSFQYA T+ +PLS+S   
Subjt:  KNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFPLSISSFK

Query:  C
        C
Subjt:  C

XP_004153503.1 protein TAPETUM DETERMINANT 1 [Cucumis sativus]1.4e-2450Show/hide
Query:  LLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSPINYGETLS
        LLL   + I      + + C  + + I+QG    +  GIPTY V++ N C   C IY +H KCG FSS+  INPR+FKRL  DDCLVN+G P+ YG TLS
Subjt:  LLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSPINYGETLS

Query:  FQYATTYMFPLSISSFKC
        FQYA TY +PLS+SS  C
Subjt:  FQYATTYMFPLSISSFKC

XP_006413361.2 protein TAPETUM DETERMINANT 1 isoform X1 [Eutrema salsugineum]2.1e-2554.46Show/hide
Query:  KNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFPLSISSFK
        + C G+ + ++Q   + M NGIP YRV+ITNQC   C I  +H+ CG FSS+  INPR+FKR+  DDCLVNNG P+ YG TLSFQYA T+ +PLS+S   
Subjt:  KNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFPLSISSFK

Query:  C
        C
Subjt:  C

XP_010535235.1 PREDICTED: protein TAPETUM DETERMINANT 1-like [Tarenaya hassleriana]7.2e-2649.59Show/hide
Query:  FLLLLLSSFISTKGGAFE--KNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSPINYGE
        FL+ +   F +  G   E    C  N++ ISQ     + NGIPT+RV+ITNQC   C+I D+HL CG FSS++ I P +FKRL+ +DCLVN G P+ +G 
Subjt:  FLLLLLSSFISTKGGAFE--KNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSPINYGE

Query:  TLSFQYATTYMFPLSISSFKC
        T+SFQYAT+++FPLS+SS +C
Subjt:  TLSFQYATTYMFPLSISSFKC

XP_024005303.1 protein TAPETUM DETERMINANT 1 isoform X2 [Eutrema salsugineum]2.1e-2554.46Show/hide
Query:  KNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFPLSISSFK
        + C G+ + ++Q   + M NGIP YRV+ITNQC   C I  +H+ CG FSS+  INPR+FKR+  DDCLVNNG P+ YG TLSFQYA T+ +PLS+S   
Subjt:  KNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFPLSISSFK

Query:  C
        C
Subjt:  C

TrEMBL top hitse value%identityAlignment
A0A0A0LUG9 Uncharacterized protein6.6e-2550Show/hide
Query:  LLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSPINYGETLS
        LLL   + I      + + C  + + I+QG    +  GIPTY V++ N C   C IY +H KCG FSS+  INPR+FKRL  DDCLVN+G P+ YG TLS
Subjt:  LLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSPINYGETLS

Query:  FQYATTYMFPLSISSFKC
        FQYA TY +PLS+SS  C
Subjt:  FQYATTYMFPLSISSFKC

A0A1S3B0P8 protein TAPETUM DETERMINANT 16.6e-2550Show/hide
Query:  LLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSPINYGETLS
        LLL   + I      + + C  + + I+QG    +  GIPTY V++ N C   C IY +H KCG FSS+  INPR+FKRL  DDCLVN+G P+ YG TLS
Subjt:  LLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSPINYGETLS

Query:  FQYATTYMFPLSISSFKC
        FQYA TY +PLS+SS  C
Subjt:  FQYATTYMFPLSISSFKC

A0A5A7UPF3 Protein TAPETUM DETERMINANT 16.6e-2550Show/hide
Query:  LLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSPINYGETLS
        LLL   + I      + + C  + + I+QG    +  GIPTY V++ N C   C IY +H KCG FSS+  INPR+FKRL  DDCLVN+G P+ YG TLS
Subjt:  LLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSPINYGETLS

Query:  FQYATTYMFPLSISSFKC
        FQYA TY +PLS+SS  C
Subjt:  FQYATTYMFPLSISSFKC

A0A6J1KH78 protein TAPETUM DETERMINANT 1-like8.6e-2550Show/hide
Query:  LLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSPINYGETLS
        LLL   + I      + + C  + + I+QG    +  GIPTY V++ N C   C IY +H KCG FSS+  INPR+FKRL  DDCLVN+G P+ YG TLS
Subjt:  LLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSPINYGETLS

Query:  FQYATTYMFPLSISSFKC
        FQYA TY +PLS+SS  C
Subjt:  FQYATTYMFPLSISSFKC

V4MEA8 Uncharacterized protein (Fragment)1.0e-2554.46Show/hide
Query:  KNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFPLSISSFK
        + C G+ + ++Q   + M NGIP YRV+ITNQC   C I  +H+ CG FSS+  INPR+FKR+  DDCLVNNG P+ YG TLSFQYA T+ +PLS+S   
Subjt:  KNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSPINYGETLSFQYATTYMFPLSISSFK

Query:  C
        C
Subjt:  C

SwissProt top hitse value%identityAlignment
A8MS78 Uncharacterized protein At1g058355.0e-0634.65Show/hide
Query:  SSLFLLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRL--AVDDCLVNNGSPIN
        SSL LLLL         GA    C+G S   +  +    +     +RV++ N+C   C I +L LKC  F   S ++P   + L  +  +C+VN+G P++
Subjt:  SSLFLLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRL--AVDDCLVNNGSPIN

Query:  YGETLSFQYATTYMF---PLSISSFKC
          +TLSF Y+ T+ F   PLS  SF+C
Subjt:  YGETLSFQYATTYMF---PLSISSFKC

Q1G3T1 TPD1 protein homolog 15.9e-2339.84Show/hide
Query:  SSSSSSSSLFLLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNG
        S + + ++L   LLLS  I        ++C  + + + QG  + + +G+P+Y V+I N C  +C I ++H+ CG FSS   +NPR+F+RL  DDCLVN+G
Subjt:  SSSSSSSSLFLLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNG

Query:  SPINYGETLSFQYATTYMFPLSISSFKC
         P+  G++LSFQYA ++ +PLS++S  C
Subjt:  SPINYGETLSFQYATTYMFPLSISSFKC

Q2QR54 TPD1 protein homolog 1A6.8e-1937.5Show/hide
Query:  FISTKGGA----------FEKNCDG-NSVAISQGEGDRMFNGIPTYRVQITNQCFG------NCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNG
        F+S  GG            +  C G + +AI QG    + +G+P Y V + N+C G       C I  +H++CG FSS S ++PR+F+RL  DDCL+N+G
Subjt:  FISTKGGA----------FEKNCDG-NSVAISQGEGDRMFNGIPTYRVQITNQCFG------NCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNG

Query:  SPINYGETLSFQYATTYMFPLSISSFKC
         P+  GET+SF+Y  ++ + LS+S   C
Subjt:  SPINYGETLSFQYATTYMFPLSISSFKC

Q6TLJ2 Protein TAPETUM DETERMINANT 11.0e-2242.65Show/hide
Query:  SSSSSSSSSSSLFLLLLLSSFISTKGGAFE-----KNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAV
        + +++SS S S   +LLLS        + E     + C    + ++Q   + M NGIP Y V+ITNQC   C I  +H+ CG FSS+  INPR+FKR+  
Subjt:  SSSSSSSSSSSLFLLLLLSSFISTKGGAFE-----KNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAV

Query:  DDCLVNNGSPINYGETLSFQYATTYMFPLSISSFKC
        DDCLVNNG P+ +G TLSF YA T+ + LS++   C
Subjt:  DDCLVNNGSPINYGETLSFQYATTYMFPLSISSFKC

Q8S6P9 TPD1 protein homolog 1B2.8e-1734.75Show/hide
Query:  SSSSSSSSSSSSSSSLFLLLLLSSFISTKGGAF------EKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIF
        S  SSSS+  S + ++  LL +S   S  GG          +C   +V + Q   + + +GIPTY V+I N C   CT+YD+H+ CG F+S+  ++P  F
Subjt:  SSSSSSSSSSSSSSSLFLLLLLSSFISTKGGAF------EKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIF

Query:  KRLAVDDCLVNNGSPINYGETLSFQYATTYMFPLSISSFKC
        +R+  +DCLV  G  +   E +SFQY+ ++ +PL++++  C
Subjt:  KRLAVDDCLVNNGSPINYGETLSFQYATTYMFPLSISSFKC

Arabidopsis top hitse value%identityAlignment
AT1G05835.1 PHD finger protein3.6e-0734.65Show/hide
Query:  SSLFLLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRL--AVDDCLVNNGSPIN
        SSL LLLL         GA    C+G S   +  +    +     +RV++ N+C   C I +L LKC  F   S ++P   + L  +  +C+VN+G P++
Subjt:  SSLFLLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRL--AVDDCLVNNGSPIN

Query:  YGETLSFQYATTYMF---PLSISSFKC
          +TLSF Y+ T+ F   PLS  SF+C
Subjt:  YGETLSFQYATTYMF---PLSISSFKC

AT1G32583.1 FUNCTIONS IN: molecular_function unknown4.2e-2439.84Show/hide
Query:  SSSSSSSSLFLLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNG
        S + + ++L   LLLS  I        ++C  + + + QG  + + +G+P+Y V+I N C  +C I ++H+ CG FSS   +NPR+F+RL  DDCLVN+G
Subjt:  SSSSSSSSLFLLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNG

Query:  SPINYGETLSFQYATTYMFPLSISSFKC
         P+  G++LSFQYA ++ +PLS++S  C
Subjt:  SPINYGETLSFQYATTYMFPLSISSFKC

AT4G24972.1 tapetum determinant 17.2e-2442.65Show/hide
Query:  SSSSSSSSSSSLFLLLLLSSFISTKGGAFE-----KNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAV
        + +++SS S S   +LLLS        + E     + C    + ++Q   + M NGIP Y V+ITNQC   C I  +H+ CG FSS+  INPR+FKR+  
Subjt:  SSSSSSSSSSSLFLLLLLSSFISTKGGAFE-----KNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAV

Query:  DDCLVNNGSPINYGETLSFQYATTYMFPLSISSFKC
        DDCLVNNG P+ +G TLSF YA T+ + LS++   C
Subjt:  DDCLVNNGSPINYGETLSFQYATTYMFPLSISSFKC

AT4G32110.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein1.5e-0527.27Show/hide
Query:  SSSSSSLFLLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSP
        +S++  L  L+L  +F++   G    +C  NS+++ Q +  ++    P + V++TN C  NC   +  L C  F+S + I+  +  + + D CLVN G  
Subjt:  SSSSSSLFLLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDDCLVNNGSP

Query:  INYGETLSFQYATTYMFPLSI
        I     + F+Y     F L +
Subjt:  INYGETLSFQYATTYMFPLSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGGGTACTGTTGCAAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTATTCCTTCTCCTTTTACTTTCTTCTTTCATTTCTAC
CAAAGGTGGAGCATTTGAAAAGAATTGCGATGGAAATTCGGTAGCAATAAGCCAAGGAGAAGGGGATCGAATGTTCAATGGAATCCCAACGTATAGGGTGCAGATAACAA
ATCAATGTTTTGGCAATTGCACTATATACGATCTGCATCTCAAATGTGGATCCTTCAGCTCTTCTAGCTCAATAAATCCTCGCATCTTCAAGAGACTCGCGGTCGACGAT
TGTCTTGTCAACAATGGATCACCAATTAACTACGGGGAAACTCTTTCTTTTCAATATGCTACTACGTATATGTTTCCTCTTTCCATTTCCTCTTTTAAATGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGATGGGTACTGTTGCAAATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTATTCCTTCTCCTTTTACTTTCTTCTTTCATTTCTAC
CAAAGGTGGAGCATTTGAAAAGAATTGCGATGGAAATTCGGTAGCAATAAGCCAAGGAGAAGGGGATCGAATGTTCAATGGAATCCCAACGTATAGGGTGCAGATAACAA
ATCAATGTTTTGGCAATTGCACTATATACGATCTGCATCTCAAATGTGGATCCTTCAGCTCTTCTAGCTCAATAAATCCTCGCATCTTCAAGAGACTCGCGGTCGACGAT
TGTCTTGTCAACAATGGATCACCAATTAACTACGGGGAAACTCTTTCTTTTCAATATGCTACTACGTATATGTTTCCTCTTTCCATTTCCTCTTTTAAATGTTAG
Protein sequenceShow/hide protein sequence
MAMGTVANSSSSSSSSSSSSSSSSLFLLLLLSSFISTKGGAFEKNCDGNSVAISQGEGDRMFNGIPTYRVQITNQCFGNCTIYDLHLKCGSFSSSSSINPRIFKRLAVDD
CLVNNGSPINYGETLSFQYATTYMFPLSISSFKC