CuGenDBv2

Gene ID	Cmc04g0107941
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B
Genome location	CMiso1.1chr04:26751786..26756608
RNA-Seq Expression	Cmc04g0107941
Synteny	Cmc04g0107941
Gene Ontology terms	GO:0022900 - electron transport chain (biological process) GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process) GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domains	IPR012576 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008460580.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Cucumis melo]

7.4e-35

100

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH
        MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH

XP_011655428.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Cucumis sativus]

8.2e-34

97.3

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH
        MANKPLGSTGEFFRRRDEWRKHPML+NQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHS+ASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH

XP_022933083.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucurbita moschata]

7.0e-33

95.95

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH
        MANKPLGSTGEFFRRRDEWRKHP LTNQFRHATPGLGIALVAFGIYLVGEQVYNRI SPSSSHHHH+DASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH

XP_022974255.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucurbita maxima]

3.1e-33

95.95

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH
        MANKPLGSTGEFFRR DEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPSSSHHHH+DASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH

XP_038876540.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Benincasa hispida]

6.3e-34

97.3

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH
        MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPS SHHHH+DASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KR92 Uncharacterized protein

4.0e-34

97.3

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH
        MANKPLGSTGEFFRRRDEWRKHPML+NQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHS+ASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH

A0A1S3CD83 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B

3.6e-35

100

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH
        MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH

A0A6J1F3P5 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like

3.4e-33

95.95

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH
        MANKPLGSTGEFFRRRDEWRKHP LTNQFRHATPGLGIALVAFGIYLVGEQVYNRI SPSSSHHHH+DASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH

A0A6J1IDH2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like

1.5e-33

95.95

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH
        MANKPLGSTGEFFRR DEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPSSSHHHH+DASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH

A0A6J1KDK9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like

3.4e-33

95.95

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Query:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH
        MANKPLGSTGEFFRRRDEWRKHP LTNQFRHATPGLGIALVAFGIYLVGEQVYNRI SPSSSHHHH+DASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH

SwissProt top hits

e value

%identity

Alignment

O64725 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-A

8.3e-21

69.35

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Query:  KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHH
        KPLG+TGEFFRRRDEWRKHPML+NQ RHA PG+GI + AF +YLVGEQ+Y+++ +PSS   H
Subjt:  KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHH

Q9M9R9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B

6.1e-24

67.61

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Query:  KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH
        KPLG+TGEFFRRRDEWRKHPML+NQ RHA PGLGI + AF +YLVGEQ+YN+  +PS S HHH + ++ +H
Subjt:  KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH

Arabidopsis top hits

e value

%identity

Alignment

AT1G14450.1 NADH dehydrogenase (ubiquinone)s

4.4e-25

67.61

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Query:  KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH
        KPLG+TGEFFRRRDEWRKHPML+NQ RHA PGLGI + AF +YLVGEQ+YN+  +PS S HHH + ++ +H
Subjt:  KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH

AT2G02510.1 NADH dehydrogenase (ubiquinone)s

5.9e-22

69.35

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Query:  KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHH
        KPLG+TGEFFRRRDEWRKHPML+NQ RHA PG+GI + AF +YLVGEQ+Y+++ +PSS   H
Subjt:  KPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHH

Sequences

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CDS sequence

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ATGGCGAATAAGCCTTTGGGATCGACGGGAGAGTTCTTCAGGAGGAGAGATGAATGGAGGAAGCATCCCATGCTTACCAATCAGTTCCGTCATGCCACTCCTGGCCTCGG
CATCGCCCTCGTTGCTTTCGGCATCTACCTTGTCGGCGAGCAAGTTTACAACAGGATCAATTCTCCCTCGTCTTCTCACCACCACCATTCCGATGCATCCTCCGCCACCC
ATTAA

mRNA sequence

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TAAAGTAATTTTAGTGTAGTTGAGGAGAAGGCTGAAAACTGGGAAGAGTGGAAAGGGAAAGTCGGGAGTGGACAATTTGGATCTCTATACTCGAAGAAGGAAAAGGAAAT
CAGAGCAAGCAATCTTCAATGGCGAATAAGCCTTTGGGATCGACGGGAGAGTTCTTCAGGAGGAGAGATGAATGGAGGAAGCATCCCATGCTTACCAATCAGTTCCGTCA
TGCCACTCCTGGCCTCGGCATCGCCCTCGTTGCTTTCGGCATCTACCTTGTCGGCGAGCAAGTTTACAACAGGATCAATTCTCCCTCGTCTTCTCACCACCACCATTCCG
ATGCATCCTCCGCCACCCATTAACTCCTACCGATGCATTCCTGTTAGGTGAATCCAAGCTTGGAGTTCTACAGCACTCGTTCTCTTTTACCTCTTTTTTTTTTTTTTTTT
TTAATGTGCAATAAAAGTAAAAACTTTTGCTGGACAAAACACTTGGAGCTTGTGAATGTTCTTGATGAGGTTGGGATTGAAATTTCCATCACAACTGAAATGTTTAATTC
TATAATCTAGTGGTTCTAGCAATTCATGTTGCTCATGGTCGGTGATGAGGTTTTCTTTTTATTCCATTAAATATGTGATTT

Protein sequence

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MANKPLGSTGEFFRRRDEWRKHPMLTNQFRHATPGLGIALVAFGIYLVGEQVYNRINSPSSSHHHHSDASSATH

Cmc04g0107941 (gene) of Melon (Charmono) v1.1 genome