; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0108081 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0108081
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBeta-galactosidase
Genome locationCMiso1.1chr04:26954999..26955457
RNA-Seq ExpressionCmc04g0108081
SyntenyCmc04g0108081
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0016301 - kinase activity (molecular function)
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031941.1 Beta-galactosidase [Cucumis melo var. makuwa]6.3e-7393.29Show/hide
Query:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD
        MLGC PADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKL YLSHTR DI FAVSVVSQFMQAPYEKHMEAVNRILRYLKN PGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD

Query:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL
        SDWA SVID+KST GYCTFVWGNLVTWRSKKQSVVARSSAEA+YRA+SL
Subjt:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL

KAA0054216.1 Beta-galactosidase [Cucumis melo var. makuwa]4.7e-7695.3Show/hide
Query:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD
        MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVG LTYLSHTR DIF AVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRK I+AYTD
Subjt:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD

Query:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL
        SDWARSVID+KSTFGYCTFVWGNLVTWRSKKQSVVARSSAEA+YRAISL
Subjt:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]6.3e-7393.29Show/hide
Query:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD
        MLGC PADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKL YLSHTR DI FAVSVVSQFMQAPYEKHMEAVNRILRYLKN PGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD

Query:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL
        SDWA SVID+KST GYCTFVWGNLVTWRSKKQSVVARSSAEA+YRA+SL
Subjt:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL

TYK03082.1 Beta-galactosidase [Cucumis melo var. makuwa]2.2e-7393.29Show/hide
Query:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD
        MLGC PADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKL YLSHTR DI FAVSVVSQFMQAPYEKHMEAVNRILRYLKN PG+GLMFRKTNRKTIEAYTD
Subjt:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD

Query:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL
        SDWA SVID+KSTFGYCTFVWGNLVTWRSKKQSVVARSSAEA+YRA+SL
Subjt:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL

TYK15048.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa]1.6e-7695.97Show/hide
Query:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD
        MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVG LTYLSHTR DIF AVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRK IEAYTD
Subjt:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD

Query:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL
        SDWARSVID+KSTFGYCTFVWGNLVTWRSKKQSVVARSSAEA+YRAISL
Subjt:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL

TrEMBL top hitse value%identityAlignment
A0A5A7UIW7 Beta-galactosidase2.3e-7695.3Show/hide
Query:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD
        MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVG LTYLSHTR DIF AVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRK I+AYTD
Subjt:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD

Query:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL
        SDWARSVID+KSTFGYCTFVWGNLVTWRSKKQSVVARSSAEA+YRAISL
Subjt:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL

A0A5D3BJK7 Beta-galactosidase3.1e-7393.29Show/hide
Query:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD
        MLGC PADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKL YLSHTR DI FAVSVVSQFMQAPYEKHMEAVNRILRYLKN PGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD

Query:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL
        SDWA SVID+KST GYCTFVWGNLVTWRSKKQSVVARSSAEA+YRA+SL
Subjt:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL

A0A5D3BW68 Beta-galactosidase1.1e-7393.29Show/hide
Query:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD
        MLGC PADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKL YLSHTR DI FAVSVVSQFMQAPYEKHMEAVNRILRYLKN PG+GLMFRKTNRKTIEAYTD
Subjt:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD

Query:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL
        SDWA SVID+KSTFGYCTFVWGNLVTWRSKKQSVVARSSAEA+YRA+SL
Subjt:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL

A0A5D3C4T4 Beta-galactosidase3.1e-7393.29Show/hide
Query:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD
        MLGC PADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKL YLSHTR DI FAVSVVSQFMQAPYEKHMEAVNRILRYLKN PGKGLMFRKTNRKTIEAYTD
Subjt:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD

Query:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL
        SDWA SVID+KST GYCTFVWGNLVTWRSKKQSVVARSSAEA+YRA+SL
Subjt:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL

A0A5D3CUZ4 Cysteine-rich RLK (Receptor-like protein kinase) 87.8e-7795.97Show/hide
Query:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD
        MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVG LTYLSHTR DIF AVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRK IEAYTD
Subjt:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD

Query:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL
        SDWARSVID+KSTFGYCTFVWGNLVTWRSKKQSVVARSSAEA+YRAISL
Subjt:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL

SwissProt top hitse value%identityAlignment
P0CV72 Secreted RxLR effector protein 1616.1e-1842.86Show/hide
Query:  YQRLVGKLTYLS-HTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCTFVWGNLVTWRS
        Y   VG + YL   TR D+  AV V+SQF   P   H +A+ R+LRYL++    GL F +     +  Y+D+DWA  V  ++ST GY   + G  V+WRS
Subjt:  YQRLVGKLTYLS-HTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCTFVWGNLVTWRS

Query:  KKQSVVARSSAEAKYRAIS
        KKQ  VA SS E +Y A+S
Subjt:  KKQSVVARSSAEAKYRAIS

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.9e-1637.16Show/hide
Query:  PADTPIEFNCKLGNS------DDQVPVDKEQYQRLVGKLTY-LSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAY
        P  TP+  + KL         +++  + K  Y   VG L Y +  TR DI  AV VVS+F++ P ++H EAV  ILRYL+   G  L F  ++   ++ Y
Subjt:  PADTPIEFNCKLGNS------DDQVPVDKEQYQRLVGKLTY-LSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAY

Query:  TDSDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRA
        TD+D A  + ++KS+ GY     G  ++W+SK Q  VA S+ EA+Y A
Subjt:  TDSDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRA

P92519 Uncharacterized mitochondrial protein AtMg008105.1e-2538.26Show/hide
Query:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD
        ML C P  TP+        S  + P D   ++ +VG L YL+ TR DI +AV++V Q M  P     + + R+LRY+K     GL   K ++  ++A+ D
Subjt:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD

Query:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL
        SDWA     ++ST G+CTF+  N+++W +K+Q  V+RSS E +YRA++L
Subjt:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.6e-2641.22Show/hide
Query:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD
        M+   P  TP+  + KL         D  +Y+ +VG L YL+ TR DI +AV+ +SQFM  P E+H++A+ RILRYL   P  G+  +K N  ++ AY+D
Subjt:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD

Query:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAIS
        +DWA    D  ST GY  ++  + ++W SKKQ  V RSS EA+YR+++
Subjt:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAIS

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE26.7e-2540.27Show/hide
Query:  MLGCCPADTPIEFNCKLG-NSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYT
        ML   P  TP+  + KL  +S  ++P D  +Y+ +VG L YL+ TR D+ +AV+ +SQ+M  P + H  A+ R+LRYL   P  G+  +K N  ++ AY+
Subjt:  MLGCCPADTPIEFNCKLG-NSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYT

Query:  DSDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAIS
        D+DWA    D  ST GY  ++  + ++W SKKQ  V RSS EA+YR+++
Subjt:  DSDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAIS

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 83.0e-2840.54Show/hide
Query:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD
        +LGC P+  P++ +           VD + Y+RL+G+L YL  TR DI FAV+ +SQF +AP   H +AV +IL Y+K   G+GL +       ++ ++D
Subjt:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD

Query:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAIS
        + +      ++ST GYC F+  +L++W+SKKQ VV++SSAEA+YRA+S
Subjt:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAIS

ATMG00240.1 Gag-Pol-related retrotransposon family protein8.7e-1239.51Show/hide
Query:  YLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCTFV
        YL+ TR D+ FAV+ +SQF  A     M+AV ++L Y+K   G+GL +  T+   ++A+ DSDWA     ++S  G+C+ V
Subjt:  YLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDKKSTFGYCTFV

ATMG00810.1 DNA/RNA polymerases superfamily protein3.6e-2638.26Show/hide
Query:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD
        ML C P  TP+        S  + P D   ++ +VG L YL+ TR DI +AV++V Q M  P     + + R+LRY+K     GL   K ++  ++A+ D
Subjt:  MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTD

Query:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL
        SDWA     ++ST G+CTF+  N+++W +K+Q  V+RSS E +YRA++L
Subjt:  SDWARSVIDKKSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGATGTTGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAA
ATTAACTTACTTATCCCATACTCGTTCTGATATTTTCTTTGCTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTTAACAGAATCT
TGAGATACTTGAAAAATATACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAAGATCTGTTATTGACAAA
AAGTCTACGTTCGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGTGCTGAGGCTAAATACAGAGCTAT
AAGTCTTGAGAATATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGATGTTGTCCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAA
ATTAACTTACTTATCCCATACTCGTTCTGATATTTTCTTTGCTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTTAACAGAATCT
TGAGATACTTGAAAAATATACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAAGATCTGTTATTGACAAA
AAGTCTACGTTCGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGTGCTGAGGCTAAATACAGAGCTAT
AAGTCTTGAGAATATGTGA
Protein sequenceShow/hide protein sequence
MLGCCPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLTYLSHTRSDIFFAVSVVSQFMQAPYEKHMEAVNRILRYLKNIPGKGLMFRKTNRKTIEAYTDSDWARSVIDK
KSTFGYCTFVWGNLVTWRSKKQSVVARSSAEAKYRAISLENM