| GenBank top hits | e value | %identity | Alignment |
|---|
| RVW50867.1 Copia protein [Vitis vinifera] | 1.0e-172 | 75.32 | Show/hide |
Query: TGKRWNRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKAR
TG++W+R N+V++NIF + VA +II +ED EP++V+EC +R DWPKWK AIQ ELNSLTK EVF P+V TP+ VKPVG+KWVFVRKRNENNE+ RYKAR
Subjt: TGKRWNRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKAR
Query: LVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWY
LVAQGFSQR GIDYEETYSPV+DAIT R+LISLAV E LDM LMDV+TAYLYGS++N+IYMKIP+GFK+P++ N+ R + SIKLQ SLYGLKQSGRMWY
Subjt: LVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWY
Query: NHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYM
N LSEYLLKE Y NNPICPC+FIKKS+ GF IIAVYVDDLN++GTP+EL++ YLKKEFEMKDLGKTKFCL LQIEH +G+ +HQSTY +K+LKRFYM
Subjt: NHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYM
Query: DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
DKAHPL+ PMVVRSLDVKKD FRP E +EELLGPEVPYLSAIGALMYLAN TR DIAFSVNLLA+YSS+PT+RHWNG+K++LRYL
Subjt: DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
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| RVW51051.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.8e-172 | 75.32 | Show/hide |
Query: TGKRWNRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKAR
TG++W+R N+V++NIF + VA +II +ED EP++V+EC +R DWPKWK AIQ ELNSLTK EVF P+V TP+ VKPVG+KWVFVRKRNENNE+ RYKAR
Subjt: TGKRWNRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKAR
Query: LVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWY
LVAQGFSQR G+DYEETYSPV+DAIT R+LISLAV E LDM LMDV+TAYLYGS++N+IYMKIP+GFK+P++ N+ R + SIKLQ SLYGLKQSGRMWY
Subjt: LVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWY
Query: NHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYM
N LSEYLLKE Y NNPICPC+FIKK + GF IIAVYVDDLN++GTP+EL++ YLKKEFEMKDLGKTKFCL LQIEH +G+ +HQSTY +K+LKRFYM
Subjt: NHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYM
Query: DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
DKAHPL+ PMVVRSLDVKKD FRP E +EELLGPEVPYLSAIGALMYLAN TR DIAFSVNLLARYSSSPT+RHWNG+K++LRYL
Subjt: DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
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| RVW51062.1 Copia protein [Vitis vinifera] | 1.4e-172 | 75.32 | Show/hide |
Query: TGKRWNRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKAR
TG++W+R N+V++NIF + VA +II +ED EP++V+EC +R DWPKWK AIQ ELNSLTK EVF P+V TP+ VKPVG+KWVFVRKRNENNE+ RYKAR
Subjt: TGKRWNRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKAR
Query: LVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWY
LVAQGFSQR GIDYEETYSPV+DAIT R+LISLAV E LDM LMDV+TAYLYGS++N+IYMKIP+GFK+P++ N+ R + SIKLQ SLYGLKQSGRMWY
Subjt: LVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWY
Query: NHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYM
N LSEYLLKE Y NNPICPC+FIKKS+ GF IIAVYVDDLN++GTP+EL++ YLKKEFEMKDLGKTKFCL LQIEH +G+ +HQSTY +K+LKRFYM
Subjt: NHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYM
Query: DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
DKAHPL+ PMVVRSLDVKKD FRP E +EELLGPEVPYL+AIGALMYLAN TR DIAFSVNLLARYSS+PT+RHWNG+K++LRYL
Subjt: DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
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| RVW59049.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 6.1e-173 | 75.58 | Show/hide |
Query: TGKRWNRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKAR
TG++W+R N+V++NIF + VA +II +ED EP++V+EC +R DWPKWK AIQ ELNSLTK EVF P+V TP+ VKPVG+KWVFVRKRNENNE+ RYKAR
Subjt: TGKRWNRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKAR
Query: LVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWY
LVAQGFSQR GIDYEETYSPV+DAIT R+LISLAV E LDM LMDV+TAYLYGS++N+IYMKIP+GFK+P++ N+ R + SIKLQ SLYGLKQSGRMWY
Subjt: LVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWY
Query: NHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYM
N LSEYLLKE Y NNPICPC+FIKKS+ GF IIAVYVDDLN++GTP+EL++ YLKKEFEMKDLGKTKFCL LQIEH +G+ +HQSTY +K+LKRFYM
Subjt: NHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYM
Query: DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
DKAHPL+ PMVVRSLDVKKD FRP E +EELLGPEVPYLSAIGALMYLAN TR DIAFSVNLLARYSS+PT+RHWNG+K++LRYL
Subjt: DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
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| RVX16158.1 Copia protein [Vitis vinifera] | 1.5e-171 | 75.06 | Show/hide |
Query: TGKRWNRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKAR
TG++W+R N+V++NIF + VA +II +ED EP++V+EC +R DWPKWK AIQ ELNSLTK EVF P+V TP+ VKPVG+KWVFVRKRNENNE+ RYKAR
Subjt: TGKRWNRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKAR
Query: LVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWY
LVAQGFSQR GIDYEETYSPV+DAIT R+LISLAV E LDM LMDV+TAYLYGS++N+IYMKIP+GFK+P++ N+ R + SIKLQ SLYGLKQSGRMWY
Subjt: LVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWY
Query: NHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYM
N LSEYLLK+ Y NNPICPC+FIKKS+ GF IIAVYVDDLN++GTP+EL++ YLKKEFEMKDLGKTKFCL LQIEH +G+ +HQSTY +K+LK FYM
Subjt: NHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYM
Query: DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
DKAHPL+ PMVVRSLDVKKD FRP E +EELLGPEVPYLSAIGALMYLAN TR DIAFSVNLLARYSS+PT+RHWNG+K++LRYL
Subjt: DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438ET65 Copia protein | 5.1e-173 | 75.32 | Show/hide |
Query: TGKRWNRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKAR
TG++W+R N+V++NIF + VA +II +ED EP++V+EC +R DWPKWK AIQ ELNSLTK EVF P+V TP+ VKPVG+KWVFVRKRNENNE+ RYKAR
Subjt: TGKRWNRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKAR
Query: LVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWY
LVAQGFSQR GIDYEETYSPV+DAIT R+LISLAV E LDM LMDV+TAYLYGS++N+IYMKIP+GFK+P++ N+ R + SIKLQ SLYGLKQSGRMWY
Subjt: LVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWY
Query: NHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYM
N LSEYLLKE Y NNPICPC+FIKKS+ GF IIAVYVDDLN++GTP+EL++ YLKKEFEMKDLGKTKFCL LQIEH +G+ +HQSTY +K+LKRFYM
Subjt: NHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYM
Query: DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
DKAHPL+ PMVVRSLDVKKD FRP E +EELLGPEVPYLSAIGALMYLAN TR DIAFSVNLLA+YSS+PT+RHWNG+K++LRYL
Subjt: DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
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| A0A438ETG9 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.6e-173 | 75.32 | Show/hide |
Query: TGKRWNRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKAR
TG++W+R N+V++NIF + VA +II +ED EP++V+EC +R DWPKWK AIQ ELNSLTK EVF P+V TP+ VKPVG+KWVFVRKRNENNE+ RYKAR
Subjt: TGKRWNRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKAR
Query: LVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWY
LVAQGFSQR G+DYEETYSPV+DAIT R+LISLAV E LDM LMDV+TAYLYGS++N+IYMKIP+GFK+P++ N+ R + SIKLQ SLYGLKQSGRMWY
Subjt: LVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWY
Query: NHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYM
N LSEYLLKE Y NNPICPC+FIKK + GF IIAVYVDDLN++GTP+EL++ YLKKEFEMKDLGKTKFCL LQIEH +G+ +HQSTY +K+LKRFYM
Subjt: NHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYM
Query: DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
DKAHPL+ PMVVRSLDVKKD FRP E +EELLGPEVPYLSAIGALMYLAN TR DIAFSVNLLARYSSSPT+RHWNG+K++LRYL
Subjt: DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
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| A0A438ETU3 Copia protein | 6.6e-173 | 75.32 | Show/hide |
Query: TGKRWNRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKAR
TG++W+R N+V++NIF + VA +II +ED EP++V+EC +R DWPKWK AIQ ELNSLTK EVF P+V TP+ VKPVG+KWVFVRKRNENNE+ RYKAR
Subjt: TGKRWNRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKAR
Query: LVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWY
LVAQGFSQR GIDYEETYSPV+DAIT R+LISLAV E LDM LMDV+TAYLYGS++N+IYMKIP+GFK+P++ N+ R + SIKLQ SLYGLKQSGRMWY
Subjt: LVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWY
Query: NHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYM
N LSEYLLKE Y NNPICPC+FIKKS+ GF IIAVYVDDLN++GTP+EL++ YLKKEFEMKDLGKTKFCL LQIEH +G+ +HQSTY +K+LKRFYM
Subjt: NHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYM
Query: DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
DKAHPL+ PMVVRSLDVKKD FRP E +EELLGPEVPYL+AIGALMYLAN TR DIAFSVNLLARYSS+PT+RHWNG+K++LRYL
Subjt: DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
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| A0A438FGC5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.0e-173 | 75.58 | Show/hide |
Query: TGKRWNRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKAR
TG++W+R N+V++NIF + VA +II +ED EP++V+EC +R DWPKWK AIQ ELNSLTK EVF P+V TP+ VKPVG+KWVFVRKRNENNE+ RYKAR
Subjt: TGKRWNRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKAR
Query: LVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWY
LVAQGFSQR GIDYEETYSPV+DAIT R+LISLAV E LDM LMDV+TAYLYGS++N+IYMKIP+GFK+P++ N+ R + SIKLQ SLYGLKQSGRMWY
Subjt: LVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWY
Query: NHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYM
N LSEYLLKE Y NNPICPC+FIKKS+ GF IIAVYVDDLN++GTP+EL++ YLKKEFEMKDLGKTKFCL LQIEH +G+ +HQSTY +K+LKRFYM
Subjt: NHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYM
Query: DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
DKAHPL+ PMVVRSLDVKKD FRP E +EELLGPEVPYLSAIGALMYLAN TR DIAFSVNLLARYSS+PT+RHWNG+K++LRYL
Subjt: DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
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| A0A438K4P3 Copia protein | 7.3e-172 | 75.06 | Show/hide |
Query: TGKRWNRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKAR
TG++W+R N+V++NIF + VA +II +ED EP++V+EC +R DWPKWK AIQ ELNSLTK EVF P+V TP+ VKPVG+KWVFVRKRNENNE+ RYKAR
Subjt: TGKRWNRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKAR
Query: LVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWY
LVAQGFSQR GIDYEETYSPV+DAIT R+LISLAV E LDM LMDV+TAYLYGS++N+IYMKIP+GFK+P++ N+ R + SIKLQ SLYGLKQSGRMWY
Subjt: LVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWY
Query: NHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYM
N LSEYLLK+ Y NNPICPC+FIKKS+ GF IIAVYVDDLN++GTP+EL++ YLKKEFEMKDLGKTKFCL LQIEH +G+ +HQSTY +K+LK FYM
Subjt: NHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYM
Query: DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
DKAHPL+ PMVVRSLDVKKD FRP E +EELLGPEVPYLSAIGALMYLAN TR DIAFSVNLLARYSS+PT+RHWNG+K++LRYL
Subjt: DKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 4.9e-56 | 36.43 | Show/hide |
Query: NRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLVAQG
N +N VV N AH I ++ P S DE R D W+ AI TELN+ + + I P+ V +WVF K NE RYKARLVA+G
Subjt: NRINVVVDNIFEYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLVAQG
Query: FSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWYNHLSE
F+Q+ IDYEET++PV + R+++SL + NL +H MDV TA+L G+L+ EIYM++P+G + N +C KL ++YGLKQ+ R W+ +
Subjt: FSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWYNHLSE
Query: YLLKEVYQNNPICPCVFI-KKSQLGFGI-IAVYVDDLNI-IGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYMDK
L + + N+ + C++I K + I + +YVDD+ I G ++ YL ++F M DL + K + ++IE D I++ QS Y +KIL +F M+
Subjt: YLLKEVYQNNPICPCVFI-KKSQLGFGI-IAVYVDDLNI-IGTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYMDK
Query: AHPLNIPMVVRSLDVKKDIFRPREDNEELLGPE----VPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
+ ++ P+ P + N ELL + P S IG LMY+ TR D+ +VN+L+RYSS W +K VLRYL
Subjt: AHPLNIPMVVRSLDVKKDIFRPREDNEELLGPE----VPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.0e-63 | 38.67 | Show/hide |
Query: NEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLVAQGFSQRLGIDYEETYSPVVDAITL
++D EP+S+ E + + + A+Q E+ SL K+ ++ +V PKG +P+ KWVF K++ + ++ RYKARLV +GF Q+ GID++E +SPVV ++
Subjt: NEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLVAQGFSQRLGIDYEETYSPVVDAITL
Query: RYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWYNHLSEYLLKEVYQNNPICPCVFIKK-S
R ++SLA +L++ +DV TA+L+G LE EIYM+ P+GF++ + +C KL SLYGLKQ+ R WY ++ + Y PCV+ K+ S
Subjt: RYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWYNHLSEYLLKEVYQNNPICPCVFIKK-S
Query: QLGFGIIAVYVDDLNIIGTPKEL-SKAIEYLKKEFEMKDLGKTKFCLDLQI--EHLADGIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKKDIFR
+ F I+ +YVDD+ I+G K L +K L K F+MKDLG + L ++I E + +++ Q Y E++L+RF M A P++ P+ KK
Subjt: QLGFGIIAVYVDDLNIIGTPKEL-SKAIEYLKKEFEMKDLGKTKFCLDLQI--EHLADGIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKKDIFR
Query: PREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
P E+ +VPY SA+G+LMY TR DIA +V +++R+ +P K HW VK +LRYL
Subjt: PREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
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| P47024 Transposon Ty4-J Gag-Pol polyprotein | 3.5e-22 | 26.93 | Show/hide |
Query: NRINVVVDNIFEYNVAH-NIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKP----VGFKWVFVRKRNENNEVTRYKAR
NR+ ++ DN+ + I+ NE ++ + + K+ ++K A EL +L +VF+ V + P V +F +KRN YKAR
Subjt: NRINVVVDNIFEYNVAH-NIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKP----VGFKWVFVRKRNENNEVTRYKAR
Query: LVAQGFSQRLGIDYEETYSPV----VDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSG
+V +G +Q +TYS + ++ ++ + +A N+ M +D+ A+LY LE EIY IP ++ C +KL +LYGLKQS
Subjt: LVAQGFSQRLGIDYEETYSPV----VDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSG
Query: RMWYNHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKE-LSKAIEYLKKEFEMKDLG--------KTKFCLDLQIEHLADGIFIHQ
+ W +HL +YL ++N P ++ +++ +IAVYVDD I + ++ L + I LK FE+K G +DL I +
Subjt: RMWYNHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTPKE-LSKAIEYLKKEFEMKDLG--------KTKFCLDLQIEHLADGIFIHQ
Query: STYTEKILKRF--YMDKAHPLNIP-MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRY
++ ++ K++ + K +IP M +D KKD+ + E EE + +G L Y+ + R DI F+V +AR + P +R + + +++Y
Subjt: STYTEKILKRF--YMDKAHPLNIP-MVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRY
Query: L
L
Subjt: L
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.4e-47 | 32.16 | Show/hide |
Query: EYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLVAQGFSQRLGIDYEE
+Y++A ++ E+ EP++ + KD +W+ A+ +E+N+ + ++ + P V VG +W+F +K N + + RYKARLVA+G++QR G+DY E
Subjt: EYNVAHNIIHENEDYEPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLVAQGFSQRLGIDYEE
Query: TYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWYNHLSEYLLKEVYQNNP
T+SPV+ + ++R ++ +AV + + +DV A+L G+L +++YM P GF + N +C KL+ +LYGLKQ+ R WY L YLL + N+
Subjt: TYSPVVDAITLRYLISLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWYNHLSEYLLKEVYQNNP
Query: ICPCVFIKKSQLGFGIIAVYVDDLNIIGT-PKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSL
+F+ + + VYVDD+ I G P L ++ L + F +KD + + L ++ + + G+ + Q Y +L R M A P+ PM +
Subjt: ICPCVFIKKSQLGFGIIAVYVDDLNIIGT-PKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSL
Query: DVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
K ++ +L P Y +G+L YLA TR DI+++VN L+++ PT+ H +K +LRYL
Subjt: DVKKDIFRPREDNEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.1e-47 | 32.65 | Show/hide |
Query: KWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDV
+W+ A+ +E+N+ + ++ + P V VG +W+F +K N + + RYKARLVA+G++QR G+DY ET+SPV+ + ++R ++ +AV + + +DV
Subjt: KWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLVAQGFSQRLGIDYEETYSPVVDAITLRYLISLAVCENLDMHLMDV
Query: VTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWYNHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTP
A+L G+L +E+YM P GF + R +L+ ++YGLKQ+ R WY L YLL + N+ +F+ + + VYVDD+ I G
Subjt: VTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWYNHLSEYLLKEVYQNNPICPCVFIKKSQLGFGIIAVYVDDLNIIGTP
Query: KELSK-AIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGAL
L K ++ L + F +K+ + L ++ + + G+ + Q YT +L R M A P+ PM + + L Y +G+L
Subjt: KELSK-AIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKKDIFRPREDNEELLGPEVPYLSAIGAL
Query: MYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
YLA TR D++++VN L++Y PT HWN +K VLRYL
Subjt: MYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 4.0e-45 | 32.4 | Show/hide |
Query: EPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLVAQGFSQRLGIDYEETYSPVVDAITLRYLI
EP + +E K++ W GA+ E+ ++ +E I P KP+G KWV+ K N + + RYKARLVA+G++Q+ GID+ ET+SPV +++ ++
Subjt: EPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLVAQGFSQRLGIDYEETYSPVVDAITLRYLI
Query: SLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWYNHLSEYLLKEVYQNNPICPCVFIKKSQLGFG
+++ N +H +D+ A+L G L+ EIYMK+P G+ + + +C +K S+YGLKQ+ R W+ S L+ + + F+K + F
Subjt: SLAVCENLDMHLMDVVTAYLYGSLENEIYMKIPKGFKIPESYNSNFRELCSIKLQISLYGLKQSGRMWYNHLSEYLLKEVYQNNPICPCVFIKKSQLGFG
Query: IIAVYVDDLNII-GTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYMDKAHPLNIPM---VVRSLDVKKDIFRPRED
+ VYVDD+ I + + LK F+++DLG K+ L L+I A GI I Q Y +L + P ++PM V S D +
Subjt: IIAVYVDDLNII-GTPKELSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYMDKAHPLNIPM---VVRSLDVKKDIFRPRED
Query: NEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
Y IG LMYL TR DI+F+VN L+++S +P H V +L Y+
Subjt: NEELLGPEVPYLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
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| ATMG00810.1 DNA/RNA polymerases superfamily protein | 5.2e-13 | 31.01 | Show/hide |
Query: IAVYVDDLNIIGTPKE-LSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKKDIFRPREDNEEL
+ +YVDD+ + G+ L+ I L F MKDLG + L +QI+ G+F+ Q+ Y E+IL M P++ P+ P + N +
Subjt: IAVYVDDLNIIGTPKE-LSKAIEYLKKEFEMKDLGKTKFCLDLQIEHLADGIFIHQSTYTEKILKRFYMDKAHPLNIPMVVRSLDVKKDIFRPREDNEEL
Query: LGPEVP----YLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
+ P + S +GAL YL TR DI+++VN++ + PT ++ +K VLRY+
Subjt: LGPEVP----YLSAIGALMYLANNTRSDIAFSVNLLARYSSSPTKRHWNGVKNVLRYL
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 2.0e-12 | 42.72 | Show/hide |
Query: EPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLVAQGFSQRLGIDYEETYSPVVDAITLRYLI
EPKSV KD P W A+Q EL++L++++ + +V P +G KWVF K + + + R KARLVA+GF Q GI + ETYSPVV T+R ++
Subjt: EPKSVDECCNRKDWPKWKGAIQTELNSLTKHEVFEPIVYTPKGVKPVGFKWVFVRKRNENNEVTRYKARLVAQGFSQRLGIDYEETYSPVVDAITLRYLI
Query: SLA
++A
Subjt: SLA
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