| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0033837.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.0e-172 | 78.09 | Show/hide |
Query: MIRAWGMEDEGFLVEYRAIE---LANNDYCKIHMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKET
+I W +DEGFL+E +AIE L NN + E DS++S V+KQ+ DVFEWP++LPPRR+IEHQIHLK+GT+PINVRPYRYGF QKEEME LVKE
Subjt: MIRAWGMEDEGFLVEYRAIE---LANNDYCKIHMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKET
Query: LESGVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMP
LES VIRPS SPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFP P+VEELFDEL GA +FSKIDLKS YHQIRM DEDIEKT FRTHEGHYEFLVM
Subjt: LESGVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMP
Query: FGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPK
FGLTNAPATFQALMN IFKPFLRK VLVFFDDIL+YSKN DH+ H+ KVLS+LR+H+LY N+KKCSFA+ K+EYLGH+ISGEGVEVD EKIKSI +WP
Subjt: FGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPK
Query: PMNIKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAILI
P NIKEVRGFLGLT YYRRFVQNYG IAAPLTQLLKKGGYKWS EA AF++LKK M SLP LALP+F QPFEIETDASGYG GA+LI
Subjt: PMNIKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAILI
|
|
| KAA0064684.1 tetratricopeptide repeat protein SKI3 [Cucumis melo var. makuwa] | 1.4e-206 | 92.47 | Show/hide |
Query: MIRAWGMEDEGFLVEYRAIELANNDYCKIHMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKETLES
MI+AWGMEDEGFLVE RAIEL NNDYC HMEIEVDS LSTVLKQF+DVFEWPEKLPPRRKIEHQIHLKQG DPINVRPYRY FQQKEEMEKLVKE LES
Subjt: MIRAWGMEDEGFLVEYRAIELANNDYCKIHMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKETLES
Query: GVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMPFGL
GVIRP+ISPFSSPVLLVKKKDGSW FCVDYRAVNNATIPDKFP PVVEELFDELSGA VFSKIDLK YHQIRMV++DIEKTAFRTHEGHYEFLVMPFGL
Subjt: GVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMPFGL
Query: TNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPKPMN
TNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDH+EHMRKVLSVLREHELY NKKKCSFA+QKVEYLGHI+SGEGVEVD EKIKSITKWPKP N
Subjt: TNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPKPMN
Query: IKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAILI
IKEVRGFLGLT YYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKK MSSLP LALPDFNQPFEI+TDASGYGVGA+LI
Subjt: IKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAILI
|
|
| KAA0067574.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 8.0e-173 | 77.32 | Show/hide |
Query: MIRAWGMEDEGFLVEYRAIEL--ANNDYCKI-HMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKET
MI+ WG +D GFL+E R+IE+ ND C + E+ +S+V+KQ++DVFEWPEKLPPRR+IEHQI +K+GT+PINVRP RYGF +KEEMEKLVKE
Subjt: MIRAWGMEDEGFLVEYRAIEL--ANNDYCKI-HMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKET
Query: LESGVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMP
L SGVIRPS SP+SSP+LLVKKKD SWRFCVDYRAVNNATIPDKFP PVVEELFDEL GA +FSKIDLKSGYHQIRM D+DIEKTAFRTHEGHYEFLVMP
Subjt: LESGVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMP
Query: FGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPK
FGLTNAPATFQAL+NTIFKPFLRKFVLVFFDDILIYSKN DH+ HM KVLS+LR+HELY N+KKC+FA++K+EYLGH+ISGEGV VD EKIK+IT WP+
Subjt: FGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPK
Query: PMNIKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAILI
P NIKE+RGFLGLT YYRRFV NYGAIAAPLTQ LKKGGYKW+ EA AF++LK M SLP LALPDFNQPFEIETDASG+GVGA+L+
Subjt: PMNIKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAILI
|
|
| TYK14999.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 3.1e-201 | 95.16 | Show/hide |
Query: MIRAWGMEDEGFLVEYRAIELANNDYCKIHMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKETLES
MIRAWGMEDEGFLVE RAIELANNDYCKIHMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKE LES
Subjt: MIRAWGMEDEGFLVEYRAIELANNDYCKIHMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKETLES
Query: GVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMPFGL
GVIRPSISPFSSPVLLVKKKD SWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMPFGL
Subjt: GVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMPFGL
Query: TNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPKPMN
TNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPKPMN
Subjt: TNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPKPMN
Query: IKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKKVMSSLP----ELALPDFNQP
IKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAE EDAFERLKK + LAL D QP
Subjt: IKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKKVMSSLP----ELALPDFNQP
|
|
| TYK18846.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] | 6.1e-173 | 75.52 | Show/hide |
Query: MIRAWGMEDEGFLVEYRAIE---LANNDYCKIHMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKET
MI+ W +D GFL+E R+++ + ++++ ++ E+E + +V+KQF+DVFEWPEKLPPRR+IEH IHLK+GT+PINVRPYRYGF QKEEMEKLV+E
Subjt: MIRAWGMEDEGFLVEYRAIE---LANNDYCKIHMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKET
Query: LESGVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMP
L SGVIRPSISP+SSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFP PVVEELFDEL GA +FSKIDLKSGYHQIRM DEDIEKTAFRTHEGHYEFLVMP
Subjt: LESGVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMP
Query: FGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPK
FGLTNAPATFQALMN IFKPFLRKFVLVFFDDIL+YS+N +H HMRKVL+VLR HEL+ N+KKC FA+QK+EYLGH+ISGEGV VD EKIK+I+ WP+
Subjt: FGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPK
Query: PMNIKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAILI
P N+KE+RGFLGLT YYRRFV+NYG IAAPLTQLLKKGG+ W+ EA AF RLK M SLP LALPDF++ FEIE DASGYGVGA+L+
Subjt: PMNIKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAILI
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SX47 Ty3/gypsy retrotransposon protein | 5.1e-173 | 78.09 | Show/hide |
Query: MIRAWGMEDEGFLVEYRAIE---LANNDYCKIHMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKET
+I W +DEGFL+E +AIE L NN + E DS++S V+KQ+ DVFEWP++LPPRR+IEHQIHLK+GT+PINVRPYRYGF QKEEME LVKE
Subjt: MIRAWGMEDEGFLVEYRAIE---LANNDYCKIHMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKET
Query: LESGVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMP
LES VIRPS SPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFP P+VEELFDEL GA +FSKIDLKS YHQIRM DEDIEKT FRTHEGHYEFLVM
Subjt: LESGVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMP
Query: FGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPK
FGLTNAPATFQALMN IFKPFLRK VLVFFDDIL+YSKN DH+ H+ KVLS+LR+H+LY N+KKCSFA+ K+EYLGH+ISGEGVEVD EKIKSI +WP
Subjt: FGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPK
Query: PMNIKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAILI
P NIKEVRGFLGLT YYRRFVQNYG IAAPLTQLLKKGGYKWS EA AF++LKK M SLP LALP+F QPFEIETDASGYG GA+LI
Subjt: PMNIKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAILI
|
|
| A0A5A7VBR1 Tetratricopeptide repeat protein SKI3 | 7.0e-207 | 92.47 | Show/hide |
Query: MIRAWGMEDEGFLVEYRAIELANNDYCKIHMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKETLES
MI+AWGMEDEGFLVE RAIEL NNDYC HMEIEVDS LSTVLKQF+DVFEWPEKLPPRRKIEHQIHLKQG DPINVRPYRY FQQKEEMEKLVKE LES
Subjt: MIRAWGMEDEGFLVEYRAIELANNDYCKIHMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKETLES
Query: GVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMPFGL
GVIRP+ISPFSSPVLLVKKKDGSW FCVDYRAVNNATIPDKFP PVVEELFDELSGA VFSKIDLK YHQIRMV++DIEKTAFRTHEGHYEFLVMPFGL
Subjt: GVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMPFGL
Query: TNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPKPMN
TNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDH+EHMRKVLSVLREHELY NKKKCSFA+QKVEYLGHI+SGEGVEVD EKIKSITKWPKP N
Subjt: TNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPKPMN
Query: IKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAILI
IKEVRGFLGLT YYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKK MSSLP LALPDFNQPFEI+TDASGYGVGA+LI
Subjt: IKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAILI
|
|
| A0A5D3BBH4 Ty3/gypsy retrotransposon protein | 3.9e-173 | 77.32 | Show/hide |
Query: MIRAWGMEDEGFLVEYRAIEL--ANNDYCKI-HMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKET
MI+ WG +D GFL+E R+IE+ ND C + E+ +S+V+KQ++DVFEWPEKLPPRR+IEHQI +K+GT+PINVRP RYGF +KEEMEKLVKE
Subjt: MIRAWGMEDEGFLVEYRAIEL--ANNDYCKI-HMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKET
Query: LESGVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMP
L SGVIRPS SP+SSP+LLVKKKD SWRFCVDYRAVNNATIPDKFP PVVEELFDEL GA +FSKIDLKSGYHQIRM D+DIEKTAFRTHEGHYEFLVMP
Subjt: LESGVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMP
Query: FGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPK
FGLTNAPATFQAL+NTIFKPFLRKFVLVFFDDILIYSKN DH+ HM KVLS+LR+HELY N+KKC+FA++K+EYLGH+ISGEGV VD EKIK+IT WP+
Subjt: FGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPK
Query: PMNIKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAILI
P NIKE+RGFLGLT YYRRFV NYGAIAAPLTQ LKKGGYKW+ EA AF++LK M SLP LALPDFNQPFEIETDASG+GVGA+L+
Subjt: PMNIKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAILI
|
|
| A0A5D3CXQ2 Ty3/gypsy retrotransposon protein | 1.5e-201 | 95.16 | Show/hide |
Query: MIRAWGMEDEGFLVEYRAIELANNDYCKIHMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKETLES
MIRAWGMEDEGFLVE RAIELANNDYCKIHMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKE LES
Subjt: MIRAWGMEDEGFLVEYRAIELANNDYCKIHMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKETLES
Query: GVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMPFGL
GVIRPSISPFSSPVLLVKKKD SWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMPFGL
Subjt: GVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMPFGL
Query: TNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPKPMN
TNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPKPMN
Subjt: TNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPKPMN
Query: IKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKKVMSSLP----ELALPDFNQP
IKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAE EDAFERLKK + LAL D QP
Subjt: IKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKKVMSSLP----ELALPDFNQP
|
|
| A0A5D3D5P9 Ty3/gypsy retrotransposon protein | 3.0e-173 | 75.52 | Show/hide |
Query: MIRAWGMEDEGFLVEYRAIE---LANNDYCKIHMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKET
MI+ W +D GFL+E R+++ + ++++ ++ E+E + +V+KQF+DVFEWPEKLPPRR+IEH IHLK+GT+PINVRPYRYGF QKEEMEKLV+E
Subjt: MIRAWGMEDEGFLVEYRAIE---LANNDYCKIHMEIEVDSALSTVLKQFQDVFEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKET
Query: LESGVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMP
L SGVIRPSISP+SSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFP PVVEELFDEL GA +FSKIDLKSGYHQIRM DEDIEKTAFRTHEGHYEFLVMP
Subjt: LESGVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMP
Query: FGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPK
FGLTNAPATFQALMN IFKPFLRKFVLVFFDDIL+YS+N +H HMRKVL+VLR HEL+ N+KKC FA+QK+EYLGH+ISGEGV VD EKIK+I+ WP+
Subjt: FGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPK
Query: PMNIKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAILI
P N+KE+RGFLGLT YYRRFV+NYG IAAPLTQLLKKGG+ W+ EA AF RLK M SLP LALPDF++ FEIE DASGYGVGA+L+
Subjt: PMNIKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAILI
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 5.4e-71 | 39.12 | Show/hide |
Query: HMEIEVDSALSTVLKQFQDV-FEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKETLESGVIRPSISPFSSPVLLV-KKKDGS----
H+ E L +L+++ D+ + +KL + +H I+ K P+ + Y Y ++E+E +++ L G+IR S SP++SP+ +V KK+D S
Subjt: HMEIEVDSALSTVLKQFQDV-FEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKETLESGVIRPSISPFSSPVLLV-KKKDGS----
Query: WRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFV
+R +DYR +N T+ D+ P P ++E+ +L F+ IDL G+HQI M E + KTAF T GHYE+L MPFGL NAPATFQ MN I +P L K
Subjt: WRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFV
Query: LVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPKPMNIKEVRGFLGLTEYYRRFVQNYGA
LV+ DDI+++S + +H++ + V L + L KC F KQ+ +LGH+++ +G++ + EKI++I K+P P KE++ FLGLT YYR+F+ N+
Subjt: LVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPKPMNIKEVRGFLGLTEYYRRFVQNYGA
Query: IAAPLTQLLKKGGY--KWSAEAEDAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAIL
IA P+T+ LKK + E + AF++LK ++S P L +PDF + F + TDAS +GA+L
Subjt: IAAPLTQLLKKGGY--KWSAEAEDAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAIL
|
|
| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 1.7e-72 | 40.5 | Show/hide |
Query: HMEIEVDSALSTVLKQFQDV-FEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKETLESGVIRPSISPFSSPVLLVKKKD-----GS
H+ E L +L +F+++ ++ EKL I+H ++ + PI + Y + E+E V+E L G+IR S SP++SP +V KK
Subjt: HMEIEVDSALSTVLKQFQDV-FEWPEKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKETLESGVIRPSISPFSSPVLLVKKKD-----GS
Query: WRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFV
+R +DYR +N TIPD++P P ++E+ +L F+ IDL G+HQI M +E I KTAF T GHYE+L MPFGL NAPATFQ MN I +P L K
Subjt: WRFCVDYRAVNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFV
Query: LVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPKPMNIKEVRGFLGLTEYYRRFVQNYGA
LV+ DDI+I+S + +H+ ++ V + L + L KC F K++ +LGHI++ +G++ + K+K+I +P P KE+R FLGLT YYR+F+ NY
Subjt: LVFFDDILIYSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPKPMNIKEVRGFLGLTEYYRRFVQNYGA
Query: IAAPLTQLLKKGGYKWSAEAE--DAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAIL
IA P+T LKK + + E +AFE+LK ++ P L LPDF + F + TDAS +GA+L
Subjt: IAAPLTQLLKKGGYKWSAEAE--DAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAIL
|
|
| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 2.8e-67 | 40.6 | Show/hide |
Query: LPPRR------KIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKETLESGVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEE
LPPR ++H I +K G ++PY + ++E+ K+V++ L++ I PS SP SSPV+LV KKDG++R CVDYR +N ATI D FP P ++
Subjt: LPPRR------KIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKETLESGVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEE
Query: LFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLS
L + A +F+ +DL SGYHQI M +D KTAF T G YE+ VMPFGL NAP+TF M F+ +FV V+ DDILI+S++ +H +H+ VL
Subjt: LFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLS
Query: VLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPKPMNIKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFER
L+ L KKKC FA ++ E+LG+ I + + K +I +P P +K+ + FLG+ YYRRF+ N IA P+ QL +W+ + + A E+
Subjt: VLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPKPMNIKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFER
Query: LKKVMSSLPELALPDFNQPFEIETDASGYGVGAIL
LK + + P L + + + TDAS G+GA+L
Subjt: LKKVMSSLPELALPDFNQPFEIETDASGYGVGAIL
|
|
| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 2.5e-68 | 36.81 | Show/hide |
Query: LSTVLKQFQDVFEWP-EKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKETLESGVIRPSISPFSSPVLLVKKK-----DGSWRFCVDYRA
L+++L +F +FE P + ++ +I DPI + Y Y + E+E+ + E L+ G+IRPS SP++SP+ +V KK + +R VD++
Subjt: LSTVLKQFQDVFEWP-EKLPPRRKIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKETLESGVIRPSISPFSSPVLLVKKK-----DGSWRFCVDYRA
Query: VNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILI
+N TIPD +P P + L A F+ +DL SG+HQI M + DI KTAF T G YEFL +PFGL NAPA FQ +++ I + + K V+ DDI++
Subjt: VNNATIPDKFPTPVVEELFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILI
Query: YSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPKPMNIKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLL
+S++ H +++R VL+ L + L N +K F +VE+LG+I++ +G++ D +K+++I++ P P ++KE++ FLG+T YYR+F+Q+Y +A PLT L
Subjt: YSKNTVDHMEHMRKVLSVLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPKPMNIKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLL
Query: K------------KGGYKWSAEAEDAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAIL
+ K A +F LK ++ S LA P F +PF + TDAS + +GA+L
Subjt: K------------KGGYKWSAEAEDAFERLKKVMSSLPELALPDFNQPFEIETDASGYGVGAIL
|
|
| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 6.1e-67 | 40.3 | Show/hide |
Query: LPPRR------KIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKETLESGVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEE
LPPR ++H I +K G ++PY + ++E+ K+V++ L++ I PS SP SSPV+LV KKDG++R CVDYR +N ATI D FP P ++
Subjt: LPPRR------KIEHQIHLKQGTDPINVRPYRYGFQQKEEMEKLVKETLESGVIRPSISPFSSPVLLVKKKDGSWRFCVDYRAVNNATIPDKFPTPVVEE
Query: LFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLS
L + A +F+ +DL SGYHQI M +D KTAF T G YE+ VMPFGL NAP+TF M F+ +FV V+ DDILI+S++ +H +H+ VL
Subjt: LFDELSGAVVFSKIDLKSGYHQIRMVDEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQALMNTIFKPFLRKFVLVFFDDILIYSKNTVDHMEHMRKVLS
Query: VLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPKPMNIKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFER
L+ L KKKC FA ++ E+LG+ I + + K +I +P P +K+ + FLG+ YYRRF+ N IA P+ QL +W+ + + A ++
Subjt: VLREHELYTNKKKCSFAKQKVEYLGHIISGEGVEVDLEKIKSITKWPKPMNIKEVRGFLGLTEYYRRFVQNYGAIAAPLTQLLKKGGYKWSAEAEDAFER
Query: LKKVMSSLPELALPDFNQPFEIETDASGYGVGAIL
LK + + P L + + + TDAS G+GA+L
Subjt: LKKVMSSLPELALPDFNQPFEIETDASGYGVGAIL
|
|
