CuGenDBv2

Gene ID	Cmc04g0108371
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr04:27585340..27587586
RNA-Seq Expression	Cmc04g0108371
Synteny	Cmc04g0108371
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0016020 - membrane (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0042119.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

85.27

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Query:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW
        MSFGLTNAP VF+DLMNRVF EFLDTF+IVFIDDI IYSKTEAEHEEHLRMVL+TLR NKLYAKFSKCEFWLKQVSFLGH++SKAGVSVDPAKIEAVTSW
Subjt:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW

Query:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA
         RPSTVSEVR+FLGLA YYRRFV NFS IATPLTQLTRKGAPFVWSK CE+SF+N+KQKLVTAP+LTVPDGSGSFVIYSDAS+KGLG VLMQQGKVVAYA
Subjt:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA

Query:  SRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR
        SRQL+ HEQNYPTHDLELA +VFAL IWRHYLYGEKIQIFTDHKSLKYFFTQKELNMR RRWLELVKDYDCEILYHPGKANVVAD LSRK SHS ALITR
Subjt:  SRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR

Query:  QAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQ
        QAPLHR+ ERAEIAVSV+AVT QLAQLTVQPTLRQ+IIDAQ ND YLVEK  LAEAGQAVEFSISSDGGLLFERRL VP+DSA+K ELL +A SSPFSM 
Subjt:  QAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQ

Query:  PGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA
        PGSTKMYQDLKRVYWWRN+K+E+ EFVS+CLVCQQVKAPRQKPAGLLQPLS+ EWKWEN SMDFITGLPRTLRGFT+IWVVV+RLTKSAHF+ GKSTYTA
Subjt:  PGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA

Query:  -------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATI
                                 +  FTSKFWKGLQ AMGTRLDF+TAFHPQTD QTERLNQVLEDMLRACALEF GS D HLHLMEFAYNNS+QATI
Subjt:  -------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATI

Query:  RMASFEALYRKCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPF
         MA FEALY KCCRSPVCW EVGEQRLM P+L+QSTNEAIQKI+SRMQTAQSRQKSY DVRRKD+EF+VGDK+FLKVAPMKGVLRFERRGKLSPRFVGPF
Subjt:  RMASFEALYRKCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSH
        EILERIG VAY LALPPSLS VHDVFHVSMLRKYVPDPSH
Subjt:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSH

KAA0045456.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

90.04

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Query:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW
        MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLR                             H++SKAGVSVDPAKIEAVTSW
Subjt:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW

Query:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA
        PRPSTVSE                           LTRKGAPFVWSKTCE+SFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA
Subjt:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA

Query:  SRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR
        SRQL+GHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR
Subjt:  SRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR

Query:  QAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQ
        QAPLHRNFERAEI VSV AVTSQLAQLTVQP LRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSM 
Subjt:  QAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQ

Query:  PGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA
        PGSTKMYQDLKRVYWWRNMKKEM+EFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA
Subjt:  PGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA

Query:  NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATIRMASFEALYRKCCRSPVCWDEVGEQ
        N+CFTSKFWKGLQAAMGTRLDFST FHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATIRMA FEALY KCCRSPVCWDEVGEQ
Subjt:  NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATIRMASFEALYRKCCRSPVCWDEVGEQ

Query:  RLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDV
        RLMDPKLVQSTNEAIQKI+SRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAY LALPPSLSAVHDV
Subjt:  RLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDV

Query:  FHVSMLRKYVPDPSHTGLRGIRD
        FHVSMLRKYVPDPSH+GLRGIRD
Subjt:  FHVSMLRKYVPDPSHTGLRGIRD

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

85.27

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Query:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW
        MSFGLTNAP VF+DLMNRVF EFLDTF+IVFIDDI IYSKTEAEHEEHLRMVL+TLR NKLYAKFSKCEFWLKQVSFLGH++SKAGVSVDPAKIEAVT W
Subjt:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW

Query:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA
         RPSTVSEVR+FLGLA YYRRFV NFS IATPLTQLTRKGAPFVWSK CE+SF+N+KQKLVTAPVLTVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYA
Subjt:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA

Query:  SRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR
        SRQL+ HEQNYPTHDLELA +VFAL IWRHYLYGEKIQIFTDHKSLKYFFTQKELNMR RRWLELVKDYDCEILYHPGKANVVAD LSRKVSHS ALITR
Subjt:  SRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR

Query:  QAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQ
        QAPLHR+ ERAEIAVSV AVT QLAQLTVQPTLRQ+IIDAQSND YLVEK  LAEAGQAVEFS+SSDGGLLFERRL VP+DS +K ELL+EAHSSPFSM 
Subjt:  QAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQ

Query:  PGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA
        PGSTKMY+D+KRVYWWRNMK+E+ EFVS+CLVCQQVKAPRQKPAGLLQPLS+ EWKWEN SMDFITGLPRTLRGFT+IWVVV+RLTKSAHF+ GKSTYTA
Subjt:  PGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA

Query:  -------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATI
                                 +  FTSKFWK LQ AMGTRLDFSTAFHPQTD QTERLNQVLE MLRACALEF GS D HLHLMEF YNNS+QATI
Subjt:  -------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATI

Query:  RMASFEALYRKCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPF
         MA FEALY KCCRSPVCW EVGEQRLM P+LVQSTNEAIQKI+SRM TAQSRQKSY DVRRKD+EF+VGDK+FLKVAPM+GVLRFERRGKLSPRF+GPF
Subjt:  RMASFEALYRKCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSH
        EILERIGPVAYRLALPPSLS VHDVFHVSMLRKYVPDPSH
Subjt:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSH

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

85.41

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Query:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW
        MSFGLTNAP VF+DLMNRVF EFLDTF+IVFIDDI IYSKTEAEHEEHLRMVL+TLR NKLYAKFSKCEFWLKQVSFLGH++SKAGVSVDPAKIEAVT W
Subjt:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW

Query:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA
         RPSTVSEVR+FLGLA YYRRFV NFS  ATPLTQLTRKGAPFVWSK CE+SF+N+KQKLVTAPVLTVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYA
Subjt:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA

Query:  SRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR
        SRQL+ HEQNYPTHDLELA +VFAL IWRHYLYGEKIQIFTDHKSLKYFFTQKELNMR RRWLELVKDYDCEILYHPGKANVVAD LSRKVSHS ALITR
Subjt:  SRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR

Query:  QAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQ
        QAPLHR+ ERAEIAVSV AVT QLAQLTVQPTLRQ+IIDAQSND YLVEK  LAEAGQAVEFS+SSDGGLLFERRL VP+DSA+K ELL EAHSSPFSM 
Subjt:  QAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQ

Query:  PGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA
        PGSTKMYQDLKR+YWWRNMK+E+ EFVSKCLVCQQVKAPRQKPAGLLQPLS+ EWKWEN SMDFI GLPRTLRGFT+IWVVV+RLTKSAHF+ GKSTYT 
Subjt:  PGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA

Query:  -------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATI
                                 +  FTSKFWKGLQ AMGTRLDFSTAFHPQTD QTERLN+VLEDMLRACALEF GS D HLHLMEFAYNNS+QATI
Subjt:  -------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATI

Query:  RMASFEALYRKCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPF
         MA FEALY KCCRSP+CW EVGEQRLM P+LVQSTNEAIQKI+SRM TAQSRQKSY DVRRKD+EF+VGDK+FLKVAPM+GV+RFERRGKLSPRFVGPF
Subjt:  RMASFEALYRKCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSH
        EILERIGPVAYRLALPPSLS VHDVFHVSMLRKYVPDPSH
Subjt:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSH

TYK00252.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.27

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Query:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW
        MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLR                             H++SKAGVSVDPAKIEAVTSW
Subjt:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW

Query:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA
        PRPSTVSEVRNFLGL  YYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCE+SFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA
Subjt:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA

Query:  SRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR
        SRQL+GHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR
Subjt:  SRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR

Query:  QAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQ
        QAPLHRNFERAEI VSV AVTSQLAQLTVQP LRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSM 
Subjt:  QAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQ

Query:  PGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA
        PGSTKMYQDLKRVYWWRNMKKEM+EFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA
Subjt:  PGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA

Query:  NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATIRMASFEALYRKCCRSPVCWDEVGEQ
        N+CFTSKFWKGLQAAMGTRLDFST FHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATIRMA FEALY KCCRSPVCWDEVGEQ
Subjt:  NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATIRMASFEALYRKCCRSPVCWDEVGEQ

Query:  RLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPV
        RLMDPKLVQSTNEAIQKI+SRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGP+
Subjt:  RLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7TLA3 Pol protein

0.0e+00

85.27

Show/hide

Query:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW
        MSFGLTNAP VF+DLMNRVF EFLDTF+IVFIDDI IYSKTEAEHEEHLRMVL+TLR NKLYAKFSKCEFWLKQVSFLGH++SKAGVSVDPAKIEAVTSW
Subjt:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW

Query:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA
         RPSTVSEVR+FLGLA YYRRFV NFS IATPLTQLTRKGAPFVWSK CE+SF+N+KQKLVTAP+LTVPDGSGSFVIYSDAS+KGLG VLMQQGKVVAYA
Subjt:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA

Query:  SRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR
        SRQL+ HEQNYPTHDLELA +VFAL IWRHYLYGEKIQIFTDHKSLKYFFTQKELNMR RRWLELVKDYDCEILYHPGKANVVAD LSRK SHS ALITR
Subjt:  SRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR

Query:  QAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQ
        QAPLHR+ ERAEIAVSV+AVT QLAQLTVQPTLRQ+IIDAQ ND YLVEK  LAEAGQAVEFSISSDGGLLFERRL VP+DSA+K ELL +A SSPFSM 
Subjt:  QAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQ

Query:  PGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA
        PGSTKMYQDLKRVYWWRN+K+E+ EFVS+CLVCQQVKAPRQKPAGLLQPLS+ EWKWEN SMDFITGLPRTLRGFT+IWVVV+RLTKSAHF+ GKSTYTA
Subjt:  PGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA

Query:  -------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATI
                                 +  FTSKFWKGLQ AMGTRLDF+TAFHPQTD QTERLNQVLEDMLRACALEF GS D HLHLMEFAYNNS+QATI
Subjt:  -------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATI

Query:  RMASFEALYRKCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPF
         MA FEALY KCCRSPVCW EVGEQRLM P+L+QSTNEAIQKI+SRMQTAQSRQKSY DVRRKD+EF+VGDK+FLKVAPMKGVLRFERRGKLSPRFVGPF
Subjt:  RMASFEALYRKCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSH
        EILERIG VAY LALPPSLS VHDVFHVSMLRKYVPDPSH
Subjt:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSH

A0A5A7TTK7 Reverse transcriptase

0.0e+00

90.04

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Query:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW
        MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLR                             H++SKAGVSVDPAKIEAVTSW
Subjt:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW

Query:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA
        PRPSTVSE                           LTRKGAPFVWSKTCE+SFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA
Subjt:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA

Query:  SRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR
        SRQL+GHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR
Subjt:  SRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR

Query:  QAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQ
        QAPLHRNFERAEI VSV AVTSQLAQLTVQP LRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSM 
Subjt:  QAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQ

Query:  PGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA
        PGSTKMYQDLKRVYWWRNMKKEM+EFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA
Subjt:  PGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA

Query:  NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATIRMASFEALYRKCCRSPVCWDEVGEQ
        N+CFTSKFWKGLQAAMGTRLDFST FHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATIRMA FEALY KCCRSPVCWDEVGEQ
Subjt:  NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATIRMASFEALYRKCCRSPVCWDEVGEQ

Query:  RLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDV
        RLMDPKLVQSTNEAIQKI+SRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAY LALPPSLSAVHDV
Subjt:  RLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDV

Query:  FHVSMLRKYVPDPSHTGLRGIRD
        FHVSMLRKYVPDPSH+GLRGIRD
Subjt:  FHVSMLRKYVPDPSHTGLRGIRD

A0A5A7U330 Reverse transcriptase

0.0e+00

85.27

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Query:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW
        MSFGLTNAP VF+DLMNRVF EFLDTF+IVFIDDI IYSKTEAEHEEHLRMVL+TLR NKLYAKFSKCEFWLKQVSFLGH++SKAGVSVDPAKIEAVT W
Subjt:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW

Query:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA
         RPSTVSEVR+FLGLA YYRRFV NFS IATPLTQLTRKGAPFVWSK CE+SF+N+KQKLVTAPVLTVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYA
Subjt:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA

Query:  SRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR
        SRQL+ HEQNYPTHDLELA +VFAL IWRHYLYGEKIQIFTDHKSLKYFFTQKELNMR RRWLELVKDYDCEILYHPGKANVVAD LSRKVSHS ALITR
Subjt:  SRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR

Query:  QAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQ
        QAPLHR+ ERAEIAVSV AVT QLAQLTVQPTLRQ+IIDAQSND YLVEK  LAEAGQAVEFS+SSDGGLLFERRL VP+DS +K ELL+EAHSSPFSM 
Subjt:  QAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQ

Query:  PGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA
        PGSTKMY+D+KRVYWWRNMK+E+ EFVS+CLVCQQVKAPRQKPAGLLQPLS+ EWKWEN SMDFITGLPRTLRGFT+IWVVV+RLTKSAHF+ GKSTYTA
Subjt:  PGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA

Query:  -------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATI
                                 +  FTSKFWK LQ AMGTRLDFSTAFHPQTD QTERLNQVLE MLRACALEF GS D HLHLMEF YNNS+QATI
Subjt:  -------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATI

Query:  RMASFEALYRKCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPF
         MA FEALY KCCRSPVCW EVGEQRLM P+LVQSTNEAIQKI+SRM TAQSRQKSY DVRRKD+EF+VGDK+FLKVAPM+GVLRFERRGKLSPRF+GPF
Subjt:  RMASFEALYRKCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSH
        EILERIGPVAYRLALPPSLS VHDVFHVSMLRKYVPDPSH
Subjt:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSH

A0A5A7UP94 Pol protein

0.0e+00

85.41

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Query:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW
        MSFGLTNAP VF+DLMNRVF EFLDTF+IVFIDDI IYSKTEAEHEEHLRMVL+TLR NKLYAKFSKCEFWLKQVSFLGH++SKAGVSVDPAKIEAVT W
Subjt:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW

Query:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA
         RPSTVSEVR+FLGLA YYRRFV NFS  ATPLTQLTRKGAPFVWSK CE+SF+N+KQKLVTAPVLTVPDGSGSFVIYSDASKKGLG VLMQQGKVVAYA
Subjt:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA

Query:  SRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR
        SRQL+ HEQNYPTHDLELA +VFAL IWRHYLYGEKIQIFTDHKSLKYFFTQKELNMR RRWLELVKDYDCEILYHPGKANVVAD LSRKVSHS ALITR
Subjt:  SRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR

Query:  QAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQ
        QAPLHR+ ERAEIAVSV AVT QLAQLTVQPTLRQ+IIDAQSND YLVEK  LAEAGQAVEFS+SSDGGLLFERRL VP+DSA+K ELL EAHSSPFSM 
Subjt:  QAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQ

Query:  PGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA
        PGSTKMYQDLKR+YWWRNMK+E+ EFVSKCLVCQQVKAPRQKPAGLLQPLS+ EWKWEN SMDFI GLPRTLRGFT+IWVVV+RLTKSAHF+ GKSTYT 
Subjt:  PGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA

Query:  -------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATI
                                 +  FTSKFWKGLQ AMGTRLDFSTAFHPQTD QTERLN+VLEDMLRACALEF GS D HLHLMEFAYNNS+QATI
Subjt:  -------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATI

Query:  RMASFEALYRKCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPF
         MA FEALY KCCRSP+CW EVGEQRLM P+LVQSTNEAIQKI+SRM TAQSRQKSY DVRRKD+EF+VGDK+FLKVAPM+GV+RFERRGKLSPRFVGPF
Subjt:  RMASFEALYRKCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPF

Query:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSH
        EILERIGPVAYRLALPPSLS VHDVFHVSMLRKYVPDPSH
Subjt:  EILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSH

A0A5D3BNE8 Reverse transcriptase

0.0e+00

93.27

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Query:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW
        MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLR                             H++SKAGVSVDPAKIEAVTSW
Subjt:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW

Query:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA
        PRPSTVSEVRNFLGL  YYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCE+SFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA
Subjt:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYA

Query:  SRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR
        SRQL+GHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR
Subjt:  SRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITR

Query:  QAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQ
        QAPLHRNFERAEI VSV AVTSQLAQLTVQP LRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSM 
Subjt:  QAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQ

Query:  PGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA
        PGSTKMYQDLKRVYWWRNMKKEM+EFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA
Subjt:  PGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTA

Query:  NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATIRMASFEALYRKCCRSPVCWDEVGEQ
        N+CFTSKFWKGLQAAMGTRLDFST FHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATIRMA FEALY KCCRSPVCWDEVGEQ
Subjt:  NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATIRMASFEALYRKCCRSPVCWDEVGEQ

Query:  RLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPV
        RLMDPKLVQSTNEAIQKI+SRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGP+
Subjt:  RLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPV

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

1.5e-90

30.88

Show/hide

Query:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW
        M +G++ AP  F   +N +  E  ++ ++ ++DDI I+SK+E+EH +H++ VL+ L+   L    +KCEF   QV F+G+ IS+ G +     I+ V  W
Subjt:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW

Query:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGK-----
         +P    E+R FLG   Y R+F+   S +  PL  L +K   + W+ T  ++ +NIKQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGK-----

Query:  VVAYASRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKV
         V Y S ++   + NY   D E+  I+ +L  WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +AD LSR  
Subjt:  VVAYASRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKV

Query:  SHSTALITRQAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERR--LFVPADSAIKIELL
             ++    P+ ++ E   I        + + Q+++    + +++   +ND  L+  + L    + VE +I    GLL   +  + +P D+ +   ++
Subjt:  SHSTALITRQAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERR--LFVPADSAIKIELL

Query:  TEAHSSPFSMQPGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSA
         + H     + PG   +   + R + W+ ++K++ E+V  C  CQ  K+   KP G LQP+   E  WE+ SMDFIT LP +  G+  ++VVV+R +K A
Subjt:  TEAHSSPFSMQPGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSA

Query:  HFILGKSTYTA-------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLME
          +    + TA                         +  FTS+ WK         + FS  + PQTD QTER NQ +E +LR        +   H+ L++
Subjt:  HFILGKSTYTA-------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLME

Query:  FAYNNSFQATIRMASFEALYR-KCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDI-EFDVGDKMFLKVAPMKGVLRFE
         +YNN+  +  +M  FE ++R     SP+   E+        +  Q T +  Q +K  + T   + K Y D++ ++I EF  GD + +K     G L   
Subjt:  FAYNNSFQATIRMASFEALYR-KCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDI-EFDVGDKMFLKVAPMKGVLRFE

Query:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRKY
        +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRKY

P0CT35 Transposon Tf2-2 polyprotein

1.5e-90

30.88

Show/hide

Query:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW
        M +G++ AP  F   +N +  E  ++ ++ ++DDI I+SK+E+EH +H++ VL+ L+   L    +KCEF   QV F+G+ IS+ G +     I+ V  W
Subjt:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW

Query:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGK-----
         +P    E+R FLG   Y R+F+   S +  PL  L +K   + W+ T  ++ +NIKQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGK-----

Query:  VVAYASRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKV
         V Y S ++   + NY   D E+  I+ +L  WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +AD LSR  
Subjt:  VVAYASRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKV

Query:  SHSTALITRQAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERR--LFVPADSAIKIELL
             ++    P+ ++ E   I        + + Q+++    + +++   +ND  L+  + L    + VE +I    GLL   +  + +P D+ +   ++
Subjt:  SHSTALITRQAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERR--LFVPADSAIKIELL

Query:  TEAHSSPFSMQPGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSA
         + H     + PG   +   + R + W+ ++K++ E+V  C  CQ  K+   KP G LQP+   E  WE+ SMDFIT LP +  G+  ++VVV+R +K A
Subjt:  TEAHSSPFSMQPGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSA

Query:  HFILGKSTYTA-------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLME
          +    + TA                         +  FTS+ WK         + FS  + PQTD QTER NQ +E +LR        +   H+ L++
Subjt:  HFILGKSTYTA-------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLME

Query:  FAYNNSFQATIRMASFEALYR-KCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDI-EFDVGDKMFLKVAPMKGVLRFE
         +YNN+  +  +M  FE ++R     SP+   E+        +  Q T +  Q +K  + T   + K Y D++ ++I EF  GD + +K     G L   
Subjt:  FAYNNSFQATIRMASFEALYR-KCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDI-EFDVGDKMFLKVAPMKGVLRFE

Query:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRKY
        +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRKY

P0CT36 Transposon Tf2-3 polyprotein

1.5e-90

30.88

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Query:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW
        M +G++ AP  F   +N +  E  ++ ++ ++DDI I+SK+E+EH +H++ VL+ L+   L    +KCEF   QV F+G+ IS+ G +     I+ V  W
Subjt:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW

Query:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGK-----
         +P    E+R FLG   Y R+F+   S +  PL  L +K   + W+ T  ++ +NIKQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGK-----

Query:  VVAYASRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKV
         V Y S ++   + NY   D E+  I+ +L  WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +AD LSR  
Subjt:  VVAYASRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKV

Query:  SHSTALITRQAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERR--LFVPADSAIKIELL
             ++    P+ ++ E   I        + + Q+++    + +++   +ND  L+  + L    + VE +I    GLL   +  + +P D+ +   ++
Subjt:  SHSTALITRQAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERR--LFVPADSAIKIELL

Query:  TEAHSSPFSMQPGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSA
         + H     + PG   +   + R + W+ ++K++ E+V  C  CQ  K+   KP G LQP+   E  WE+ SMDFIT LP +  G+  ++VVV+R +K A
Subjt:  TEAHSSPFSMQPGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSA

Query:  HFILGKSTYTA-------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLME
          +    + TA                         +  FTS+ WK         + FS  + PQTD QTER NQ +E +LR        +   H+ L++
Subjt:  HFILGKSTYTA-------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLME

Query:  FAYNNSFQATIRMASFEALYR-KCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDI-EFDVGDKMFLKVAPMKGVLRFE
         +YNN+  +  +M  FE ++R     SP+   E+        +  Q T +  Q +K  + T   + K Y D++ ++I EF  GD + +K     G L   
Subjt:  FAYNNSFQATIRMASFEALYR-KCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDI-EFDVGDKMFLKVAPMKGVLRFE

Query:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRKY
        +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRKY

P0CT37 Transposon Tf2-4 polyprotein

1.5e-90

30.88

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Query:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW
        M +G++ AP  F   +N +  E  ++ ++ ++DDI I+SK+E+EH +H++ VL+ L+   L    +KCEF   QV F+G+ IS+ G +     I+ V  W
Subjt:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW

Query:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGK-----
         +P    E+R FLG   Y R+F+   S +  PL  L +K   + W+ T  ++ +NIKQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGK-----

Query:  VVAYASRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKV
         V Y S ++   + NY   D E+  I+ +L  WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +AD LSR  
Subjt:  VVAYASRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKV

Query:  SHSTALITRQAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERR--LFVPADSAIKIELL
             ++    P+ ++ E   I        + + Q+++    + +++   +ND  L+  + L    + VE +I    GLL   +  + +P D+ +   ++
Subjt:  SHSTALITRQAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERR--LFVPADSAIKIELL

Query:  TEAHSSPFSMQPGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSA
         + H     + PG   +   + R + W+ ++K++ E+V  C  CQ  K+   KP G LQP+   E  WE+ SMDFIT LP +  G+  ++VVV+R +K A
Subjt:  TEAHSSPFSMQPGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSA

Query:  HFILGKSTYTA-------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLME
          +    + TA                         +  FTS+ WK         + FS  + PQTD QTER NQ +E +LR        +   H+ L++
Subjt:  HFILGKSTYTA-------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLME

Query:  FAYNNSFQATIRMASFEALYR-KCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDI-EFDVGDKMFLKVAPMKGVLRFE
         +YNN+  +  +M  FE ++R     SP+   E+        +  Q T +  Q +K  + T   + K Y D++ ++I EF  GD + +K     G L   
Subjt:  FAYNNSFQATIRMASFEALYR-KCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDI-EFDVGDKMFLKVAPMKGVLRFE

Query:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRKY
        +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRKY

P0CT41 Transposon Tf2-12 polyprotein

1.5e-90

30.88

Show/hide

Query:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW
        M +G++ AP  F   +N +  E  ++ ++ ++DDI I+SK+E+EH +H++ VL+ L+   L    +KCEF   QV F+G+ IS+ G +     I+ V  W
Subjt:  MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSW

Query:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGK-----
         +P    E+R FLG   Y R+F+   S +  PL  L +K   + W+ T  ++ +NIKQ LV+ PVL   D S   ++ +DAS   +G VL Q+       
Subjt:  PRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGK-----

Query:  VVAYASRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKV
         V Y S ++   + NY   D E+  I+ +L  WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +AD LSR  
Subjt:  VVAYASRQLEGHEQNYPTHDLELAVIVFALNIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKV

Query:  SHSTALITRQAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERR--LFVPADSAIKIELL
             ++    P+ ++ E   I        + + Q+++    + +++   +ND  L+  + L    + VE +I    GLL   +  + +P D+ +   ++
Subjt:  SHSTALITRQAPLHRNFERAEIAVSVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERR--LFVPADSAIKIELL

Query:  TEAHSSPFSMQPGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSA
         + H     + PG   +   + R + W+ ++K++ E+V  C  CQ  K+   KP G LQP+   E  WE+ SMDFIT LP +  G+  ++VVV+R +K A
Subjt:  TEAHSSPFSMQPGSTKMYQDLKRVYWWRNMKKEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSA

Query:  HFILGKSTYTA-------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLME
          +    + TA                         +  FTS+ WK         + FS  + PQTD QTER NQ +E +LR        +   H+ L++
Subjt:  HFILGKSTYTA-------------------------NLCFTSKFWKGLQAAMGTRLDFSTAFHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLME

Query:  FAYNNSFQATIRMASFEALYR-KCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDI-EFDVGDKMFLKVAPMKGVLRFE
         +YNN+  +  +M  FE ++R     SP+   E+        +  Q T +  Q +K  + T   + K Y D++ ++I EF  GD + +K     G L   
Subjt:  FAYNNSFQATIRMASFEALYR-KCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQKSYVDVRRKDI-EFDVGDKMFLKVAPMKGVLRFE

Query:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRKY
        +  KL+P F GPF +L++ GP  Y L LP S+  +    FHVS L KY
Subjt:  RRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAV-HDVFHVSMLRKY

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

7.8e-26

45.04

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Query:  HLRMVLETLRANKLYAKFSKCEFWLKQVSFLG--HLISKAGVSVDPAKIEAVTSWPRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVW
        HL MVL+    ++ YA   KC F   Q+++LG  H+IS  GVS DPAK+EA+  WP P   +E+R FLGL  YYRRFV N+  I  PLT+L +K +   W
Subjt:  HLRMVLETLRANKLYAKFSKCEFWLKQVSFLG--HLISKAGVSVDPAKIEAVTSWPRPSTVSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVW

Query:  SKTCEESFKNIKQKLVTAPVLTVPDGSGSFV
        ++    +FK +K  + T PVL +PD    FV
Subjt:  SKTCEESFKNIKQKLVTAPVLTVPDGSGSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTTTTGGTTTGACGAATGCTCCGATAGTGTTTATCGATTTGATGAACAGAGTGTTTATAGAGTTTCTAGACACTTTTATGATCGTGTTTATTGATGATATT
TGGATATATTCCAAGACAGAGGCCGAGCATGAGGAGCATTTACGTATGGTCCTAGAAACCCTTCGAGCTAATAAACTGTATGCAAAATTCTCAAAATGTGAGTTT
TGGTTGAAGCAGGTATCCTTTCTAGGCCATTTGATTTCTAAAGCTGGTGTTTCCGTGGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGCCCCGACCTTCTACA
GTCAGTGAGGTTCGTAACTTTCTTGGTTTAGCATGTTATTATCGACGGTTTGTGGTGAACTTTTCCCATATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGA
GCTCCTTTCGTTTGGAGCAAGACCTGTGAGGAAAGTTTTAAGAACATTAAACAAAAGCTAGTTACTGCACCAGTTCTTACCGTACCTGATGGTTCCGGGAGTTTT
GTGATTTACAGTGATGCTTCTAAGAAAGGTTTGGGTTATGTTTTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTCGTCAGTTGGAGGGTCATGAGCAGAAT
TACCCTACACACGATTTAGAGTTGGCAGTAATAGTTTTTGCACTGAATATATGGAGGCATTACTTGTATGGTGAAAAGATACAGATCTTCACGGATCATAAAAGC
TTGAAATACTTCTTCACTCAGAAGGAATTGAATATGAGACACCGAAGATGGCTTGAATTAGTGAAGGATTACGATTGTGAGATATTGTATCATCCAGGCAAGGCG
AATGTGGTAGCTGATCCTCTTAGTAGAAAGGTATCACATTCAACAGCACTTATTACCCGACAGGCTCCGTTGCATCGAAATTTTGAGAGGGCTGAGATTGCAGTG
TCAGTAGAGGCAGTCACTTCACAGTTAGCCCAGTTAACGGTGCAACCGACTTTGAGGCAGAAGATCATTGATGCTCAGAGTAACGATCTATACTTGGTTGAAAAG
CATTTCCTAGCAGAAGCAGGGCAAGCTGTCGAGTTCTCCATATCCTCTGATGGTGGGCTTTTGTTTGAGAGGCGCCTTTTTGTGCCAGCAGACAGCGCGATTAAA
ATAGAATTATTGACTGAGGCTCATAGTTCCCCATTTTCCATGCAGCCAGGTAGTACGAAGATGTATCAGGACCTAAAACGAGTTTACTGGTGGCGTAATATGAAG
AAAGAGATGATAGAATTTGTCAGTAAATGCTTGGTGTGCCAGCAAGTTAAGGCACCAAGGCAGAAACCAGCAGGTTTATTACAACCCTTGAGCGTACGAGAATGG
AAGTGGGAAAACGAGTCCATGGATTTCATTACAGGACTGCCTAGAACTCTGAGGGGTTTTACATTGATTTGGGTTGTGGTTGAAAGGCTTACCAAATCAGCCCAC
TTCATTCTGGGGAAATCCACTTATACTGCTAATCTCTGTTTCACTTCCAAGTTCTGGAAGGGTTTACAGGCTGCTATGGGCACGAGGTTAGACTTTAGTACGGCT
TTCCACCCACAGACTGATTGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCTTGTGCATTAGAATTCCTAGGTAGTTTGGATTTCCACTTG
CATTTGATGGAATTTGCTTATAATAACAGTTTCCAGGCTACCATTCGCATGGCATCATTTGAGGCCTTGTACAGAAAATGTTGTAGATCCCCTGTTTGCTGGGAT
GAGGTTGGTGAGCAGAGATTGATGGATCCTAAGTTAGTTCAGTCTACTAACGAAGCGATACAGAAAATTAAATCACGTATGCAGACCGCACAGAGTAGGCAGAAG
AGTTATGTTGATGTGAGACGAAAGGATATTGAATTTGATGTGGGGGACAAAATGTTCTTAAAAGTAGCACCTATGAAAGGTGTCTTACGATTTGAAAGGAGAGGA
AAGCTGAGTCCTCGTTTTGTTGGGCCGTTTGAGATTCTAGAGCGAATTGGCCCTGTAGCATATCGCTTGGCGTTGCCACCATCACTCTCGGCAGTTCATGATGTG
TTCCATGTTTCTATGTTAAGGAAGTATGTGCCAGATCCATCCCATACTGGATTACGAGGCATTAGAGATTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSFGLTNAPIVFIDLMNRVFIEFLDTFMIVFIDDIWIYSKTEAEHEEHLRMVLETLRANKLYAKFSKCEFWLKQVSFLGHLISKAGVSVDPAKIEAVTSWPRPST
VSEVRNFLGLACYYRRFVVNFSHIATPLTQLTRKGAPFVWSKTCEESFKNIKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGYVLMQQGKVVAYASRQLEGHEQN
YPTHDLELAVIVFALNIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRHRRWLELVKDYDCEILYHPGKANVVADPLSRKVSHSTALITRQAPLHRNFERAEIAV
SVEAVTSQLAQLTVQPTLRQKIIDAQSNDLYLVEKHFLAEAGQAVEFSISSDGGLLFERRLFVPADSAIKIELLTEAHSSPFSMQPGSTKMYQDLKRVYWWRNMK
KEMIEFVSKCLVCQQVKAPRQKPAGLLQPLSVREWKWENESMDFITGLPRTLRGFTLIWVVVERLTKSAHFILGKSTYTANLCFTSKFWKGLQAAMGTRLDFSTA
FHPQTDCQTERLNQVLEDMLRACALEFLGSLDFHLHLMEFAYNNSFQATIRMASFEALYRKCCRSPVCWDEVGEQRLMDPKLVQSTNEAIQKIKSRMQTAQSRQK
SYVDVRRKDIEFDVGDKMFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPPSLSAVHDVFHVSMLRKYVPDPSHTGLRGIRD

Cmc04g0108371 (gene) of Melon (Charmono) v1.1 genome