; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0108471 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0108471
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationCMiso1.1chr04:28008543..28008997
RNA-Seq ExpressionCmc04g0108471
SyntenyCmc04g0108471
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053169.1 uncharacterized protein E6C27_scaffold1121G00060 [Cucumis melo var. makuwa]1.5e-0551.32Show/hide
Query:  AEALEYKSRPWARAPCVNGRAWGARCTPMRLRGACAQGAARAMRLRACVGRASQAQAMQWGVRV---GCRTRHACA
        AEALEYK+RPWA APCV+GR W AR  P+RLRGACA  A +A      VG A +   ++ G+ V   G R RH  +
Subjt:  AEALEYKSRPWARAPCVNGRAWGARCTPMRLRGACAQGAARAMRLRACVGRASQAQAMQWGVRV---GCRTRHACA
TrEMBL top hitse value%identityAlignment
A0A5A7UI67 Retrotrans_gag domain-containing protein7.4e-0651.32Show/hide
Query:  AEALEYKSRPWARAPCVNGRAWGARCTPMRLRGACAQGAARAMRLRACVGRASQAQAMQWGVRV---GCRTRHACA
        AEALEYK+RPWA APCV+GR W AR  P+RLRGACA  A +A      VG A +   ++ G+ V   G R RH  +
Subjt:  AEALEYKSRPWARAPCVNGRAWGARCTPMRLRGACAQGAARAMRLRACVGRASQAQAMQWGVRV---GCRTRHACA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAGGCCTTGGAGTACAAATCACGGCCATGGGCACGCGCGCCGTGCGTCAATGGGCGTGCGTGGGGAGCTCGCTGCACGCCCATGCGTCTGCGGGGGGCGTGCGC
ACAGGGTGCCGCGCGCGCCATGCGTCTGCGGGCGTGTGTGGGGCGCGCGTCGCAAGCCCAGGCGATGCAGTGGGGCGTGCGCGTAGGGTGCCGCACACGCCATGCTTGTG
CGAGCGTGGGGATCCGTCTAAGGGGCGTGCGTTCTTGGCTTGTAAGTGGCAGATGA
mRNA sequenceShow/hide mRNA sequence
CCTCCCCACACATGACCCATTTATTTCTTCCAATTGCTTTGGAGGTTATGTATTATGCAAAACGACGAAAAACACAAGTGTTAGTGAGGGGTTTGGCCTTCAACTAGAAA
ACAAGTTGACGCGAAACATCTTCGAATTTCCAAGTACATGATAGGGTGCTCGTGTGCAAGTCAAGGCCCATGGCCGAGGCCTTGGAGTACAAATCACGGCCATGGGCACG
CGCGCCGTGCGTCAATGGGCGTGCGTGGGGAGCTCGCTGCACGCCCATGCGTCTGCGGGGGGCGTGCGCACAGGGTGCCGCGCGCGCCATGCGTCTGCGGGCGTGTGTGG
GGCGCGCGTCGCAAGCCCAGGCGATGCAGTGGGGCGTGCGCGTAGGGTGCCGCACACGCCATGCTTGTGCGAGCGTGGGGATCCGTCTAAGGGGCGTGCGTTCTTGGCTT
GTAAGTGGCAGATGA
Protein sequenceShow/hide protein sequence
MAEALEYKSRPWARAPCVNGRAWGARCTPMRLRGACAQGAARAMRLRACVGRASQAQAMQWGVRVGCRTRHACASVGIRLRGVRSWLVSGR