; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0108501 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0108501
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr04:28042392..28043949
RNA-Seq ExpressionCmc04g0108501
SyntenyCmc04g0108501
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008194 - UDP-glycosyltransferase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032541.1 pol protein [Cucumis melo var. makuwa]1.2e-24784.39Show/hide
Query:  MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREY
        MLDVTLLVLDMQDFDVILGMDWLSANHA+ID FGKEVIFNPPSG SFKF+GAG+VCIPKVISAMKASKLLSQGTW ILAS+VD RE EV LSSEPVVREY
Subjt:  MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREY

Query:  PDVFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLP
        PDVF D+LPGLPPPR++DF IELEP TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKV VKNRYPLP
Subjt:  PDVFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLP

Query:  RIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLH
        RIDDLFDQLQGATVFSKIDLRSGYHQ RIR+ DIPKTAFRSR G                                 + +FID+ILIYSK EAEHEEHLH
Subjt:  RIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLH

Query:  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCE
        QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIEAVT+WPR STVSEIRSFLGLA YYRRFVEDFSR+ASPLTQLTRKGTPFVWS  CE
Subjt:  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCE

Query:  SSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYF
         SFQELK QKLV+ PVLTVPDGSG+FVIYSDASKKGLGCVLMQQG+VVAYAS  LK HEQNYPTHDLELAAVVFALKIWRHYLY ++IQI+ DHKSLKYF
Subjt:  SSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYF

Query:  FTQKGLNMRQRRWLELVKD
        FTQK LNMRQRRWLELVKD
Subjt:  FTQKGLNMRQRRWLELVKD

KAA0037369.1 pol protein [Cucumis melo var. makuwa]9.6e-24884.2Show/hide
Query:  MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREY
        MLDVTLLVLDMQDFDVILGMDWLSANHA+ID FGKEV+FNPPSG SFKF+G GIVCIPKVISAMKASKLLSQGTW ILAS+VD RE EV LSSEPVVREY
Subjt:  MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREY

Query:  PDVFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLP
        PDVF D+LPGLPPPR++DF IELEP TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKV VKNRYPLP
Subjt:  PDVFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLP

Query:  RIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLH
        RIDDLFDQLQGATVFSKIDLRSGYHQ RIR+ DIPKTAFRSR G                                 + +FID+ILIYSK EAEHEEHLH
Subjt:  RIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLH

Query:  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCE
        QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIEAVT+WPR STVSEIRSFLGLA YYRRFVEDFSR+A+PLTQLTRKG PFVWS  CE
Subjt:  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCE

Query:  SSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYF
        SSFQELK QKLV+ PVLTVPDGSG+FVIYSDASKKGLGCVLMQQG+VVAYAS  LK HEQNYPTHDLELAAVVFALKIWRHYLYG++IQI+ DHKSLKYF
Subjt:  SSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYF

Query:  FTQKGLNMRQRRWLELVKD
        FTQK LNMRQRRWLELVKD
Subjt:  FTQKGLNMRQRRWLELVKD

KAA0058812.1 pol protein [Cucumis melo var. makuwa]4.3e-24884.2Show/hide
Query:  MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREY
        MLDVTLLVLDMQDFDVILGMDWLSANHA+ID FGKEV+FNPPSG SFKF+GAGIVCIPKVISAMKASKLLSQGTW ILAS+VD RE EV LSSEPVVREY
Subjt:  MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREY

Query:  PDVFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLP
        PDVF D+LPGLPPPR++DF IELEP TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKV +KNRYPLP
Subjt:  PDVFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLP

Query:  RIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLH
        RIDDLFDQLQGATVFSKIDLRSGYHQ RIR+ DIPKTAF SR G                                 + +FID+ILIYSK EAEHEEHLH
Subjt:  RIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLH

Query:  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCE
        QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIEAVT+WPR STVSEIRSFLGLA YYRRFVEDFSR+ASPLTQLTRKGTPFVWS  CE
Subjt:  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCE

Query:  SSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYF
        SSFQELK QKLV+ PVLTVPDGSG+FVIYSDASKKGLGCVLMQQG+VVAYAS  LK HEQNYPTHDLELA VVFALKIWRHYLYG++IQI+ DHKSLKYF
Subjt:  SSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYF

Query:  FTQKGLNMRQRRWLELVKD
        FTQK LNMRQRRWLELVKD
Subjt:  FTQKGLNMRQRRWLELVKD

KAA0060745.1 pol protein [Cucumis melo var. makuwa]3.3e-24884.39Show/hide
Query:  MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREY
        MLDVTLLVLDMQDFDVILGMDWLSANHA+ID FGKEV+FNPPSG SFKF+GAG+VCIPKVISAMKASKLLSQGTW ILAS+VD RE EV LSSEPVVREY
Subjt:  MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREY

Query:  PDVFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLP
        PDVF D+LPGLPPPR++DF IELEP TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKV VKNRYPLP
Subjt:  PDVFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLP

Query:  RIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLH
        +IDDLFDQLQGATVFSKIDLRSGYHQ RIR+ DIPKTAFRSR G                                 + +FID+ILIYSK EAEHEEHLH
Subjt:  RIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLH

Query:  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCE
        QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIEAVT+WPR STVSEIRSFLGLA YYRRFVEDFSR+ASPLTQLTRKGTPFVWS  CE
Subjt:  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCE

Query:  SSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYF
        SSFQELK QKLV  PVLTVPDGSG+FVIYSDASKKGLGCVLMQQG+VVAYAS  LK HEQNYPTHDLELAAVVFALKIWRHYLYG++IQI+ DHKSLKYF
Subjt:  SSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYF

Query:  FTQKGLNMRQRRWLELVKD
        FTQK LNMRQRRWLELVKD
Subjt:  FTQKGLNMRQRRWLELVKD

TYK01306.1 pol protein [Cucumis melo var. makuwa]9.6e-24884.39Show/hide
Query:  MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREY
        ML+VTLLVLDMQDFDVILGMDWLSANHA+ID FGKEV+FNPPSG SFKF+GAG+VCIPKVISAMKASKLLSQGTW ILAS+VD RE EV LSSEPVVREY
Subjt:  MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREY

Query:  PDVFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLP
        PDVF D+LPGLPPPR++DF IELEP TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKV VKNRYPLP
Subjt:  PDVFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLP

Query:  RIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLH
        RIDDLFDQLQGATVFSKIDLRSGYHQ RIR+SDIPKTAFR R G                                 + +FID+ILIYSK EAEHEEHLH
Subjt:  RIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLH

Query:  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCE
        QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIEAVT+WPR STVSEIRSFLGLA YYRRFVEDFSR+ASPLTQLTR+GTPFVWS  CE
Subjt:  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCE

Query:  SSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYF
        SSFQ+LK QKLV+ PVLTVPDGSGSFVIYSDASKKGLGCVLMQQG+VVAYAS  LKSHEQNYPTHDLELAAVVFALKIWRHYLY ++IQIF DHKSLKYF
Subjt:  SSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYF

Query:  FTQKGLNMRQRRWLELVKD
        FTQK LNMRQRRWLELVKD
Subjt:  FTQKGLNMRQRRWLELVKD

TrEMBL top hitse value%identityAlignment
A0A5A7SSL3 Reverse transcriptase6.0e-24884.39Show/hide
Query:  MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREY
        MLDVTLLVLDMQDFDVILGMDWLSANHA+ID FGKEVIFNPPSG SFKF+GAG+VCIPKVISAMKASKLLSQGTW ILAS+VD RE EV LSSEPVVREY
Subjt:  MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREY

Query:  PDVFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLP
        PDVF D+LPGLPPPR++DF IELEP TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKV VKNRYPLP
Subjt:  PDVFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLP

Query:  RIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLH
        RIDDLFDQLQGATVFSKIDLRSGYHQ RIR+ DIPKTAFRSR G                                 + +FID+ILIYSK EAEHEEHLH
Subjt:  RIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLH

Query:  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCE
        QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIEAVT+WPR STVSEIRSFLGLA YYRRFVEDFSR+ASPLTQLTRKGTPFVWS  CE
Subjt:  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCE

Query:  SSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYF
         SFQELK QKLV+ PVLTVPDGSG+FVIYSDASKKGLGCVLMQQG+VVAYAS  LK HEQNYPTHDLELAAVVFALKIWRHYLY ++IQI+ DHKSLKYF
Subjt:  SSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYF

Query:  FTQKGLNMRQRRWLELVKD
        FTQK LNMRQRRWLELVKD
Subjt:  FTQKGLNMRQRRWLELVKD

A0A5A7T7M0 Reverse transcriptase4.6e-24884.2Show/hide
Query:  MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREY
        MLDVTLLVLDMQDFDVILGMDWLSANHA+ID FGKEV+FNPPSG SFKF+G GIVCIPKVISAMKASKLLSQGTW ILAS+VD RE EV LSSEPVVREY
Subjt:  MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREY

Query:  PDVFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLP
        PDVF D+LPGLPPPR++DF IELEP TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKV VKNRYPLP
Subjt:  PDVFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLP

Query:  RIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLH
        RIDDLFDQLQGATVFSKIDLRSGYHQ RIR+ DIPKTAFRSR G                                 + +FID+ILIYSK EAEHEEHLH
Subjt:  RIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLH

Query:  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCE
        QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIEAVT+WPR STVSEIRSFLGLA YYRRFVEDFSR+A+PLTQLTRKG PFVWS  CE
Subjt:  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCE

Query:  SSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYF
        SSFQELK QKLV+ PVLTVPDGSG+FVIYSDASKKGLGCVLMQQG+VVAYAS  LK HEQNYPTHDLELAAVVFALKIWRHYLYG++IQI+ DHKSLKYF
Subjt:  SSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYF

Query:  FTQKGLNMRQRRWLELVKD
        FTQK LNMRQRRWLELVKD
Subjt:  FTQKGLNMRQRRWLELVKD

A0A5A7USG7 Reverse transcriptase2.1e-24884.2Show/hide
Query:  MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREY
        MLDVTLLVLDMQDFDVILGMDWLSANHA+ID FGKEV+FNPPSG SFKF+GAGIVCIPKVISAMKASKLLSQGTW ILAS+VD RE EV LSSEPVVREY
Subjt:  MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREY

Query:  PDVFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLP
        PDVF D+LPGLPPPR++DF IELEP TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKV +KNRYPLP
Subjt:  PDVFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLP

Query:  RIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLH
        RIDDLFDQLQGATVFSKIDLRSGYHQ RIR+ DIPKTAF SR G                                 + +FID+ILIYSK EAEHEEHLH
Subjt:  RIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLH

Query:  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCE
        QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIEAVT+WPR STVSEIRSFLGLA YYRRFVEDFSR+ASPLTQLTRKGTPFVWS  CE
Subjt:  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCE

Query:  SSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYF
        SSFQELK QKLV+ PVLTVPDGSG+FVIYSDASKKGLGCVLMQQG+VVAYAS  LK HEQNYPTHDLELA VVFALKIWRHYLYG++IQI+ DHKSLKYF
Subjt:  SSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYF

Query:  FTQKGLNMRQRRWLELVKD
        FTQK LNMRQRRWLELVKD
Subjt:  FTQKGLNMRQRRWLELVKD

A0A5A7V4E4 Reverse transcriptase1.6e-24884.39Show/hide
Query:  MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREY
        MLDVTLLVLDMQDFDVILGMDWLSANHA+ID FGKEV+FNPPSG SFKF+GAG+VCIPKVISAMKASKLLSQGTW ILAS+VD RE EV LSSEPVVREY
Subjt:  MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREY

Query:  PDVFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLP
        PDVF D+LPGLPPPR++DF IELEP TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKV VKNRYPLP
Subjt:  PDVFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLP

Query:  RIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLH
        +IDDLFDQLQGATVFSKIDLRSGYHQ RIR+ DIPKTAFRSR G                                 + +FID+ILIYSK EAEHEEHLH
Subjt:  RIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLH

Query:  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCE
        QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIEAVT+WPR STVSEIRSFLGLA YYRRFVEDFSR+ASPLTQLTRKGTPFVWS  CE
Subjt:  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCE

Query:  SSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYF
        SSFQELK QKLV  PVLTVPDGSG+FVIYSDASKKGLGCVLMQQG+VVAYAS  LK HEQNYPTHDLELAAVVFALKIWRHYLYG++IQI+ DHKSLKYF
Subjt:  SSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYF

Query:  FTQKGLNMRQRRWLELVKD
        FTQK LNMRQRRWLELVKD
Subjt:  FTQKGLNMRQRRWLELVKD

A0A5D3BSV9 Reverse transcriptase4.6e-24884.39Show/hide
Query:  MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREY
        ML+VTLLVLDMQDFDVILGMDWLSANHA+ID FGKEV+FNPPSG SFKF+GAG+VCIPKVISAMKASKLLSQGTW ILAS+VD RE EV LSSEPVVREY
Subjt:  MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREY

Query:  PDVFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLP
        PDVF D+LPGLPPPR++DF IELEP TAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKV VKNRYPLP
Subjt:  PDVFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLP

Query:  RIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLH
        RIDDLFDQLQGATVFSKIDLRSGYHQ RIR+SDIPKTAFR R G                                 + +FID+ILIYSK EAEHEEHLH
Subjt:  RIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLH

Query:  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCE
        QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIEAVT+WPR STVSEIRSFLGLA YYRRFVEDFSR+ASPLTQLTR+GTPFVWS  CE
Subjt:  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCE

Query:  SSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYF
        SSFQ+LK QKLV+ PVLTVPDGSGSFVIYSDASKKGLGCVLMQQG+VVAYAS  LKSHEQNYPTHDLELAAVVFALKIWRHYLY ++IQIF DHKSLKYF
Subjt:  SSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYF

Query:  FTQKGLNMRQRRWLELVKD
        FTQK LNMRQRRWLELVKD
Subjt:  FTQKGLNMRQRRWLELVKD

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.61.1e-6029.59Show/hide
Query:  QDFDVILGMDWLSANHASIDYFGKEV---------IFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREYPD
        +++D++LG   L+   A+I Y  +EV         I    +     F+   ++    +    K S +L    +  L  + +  +Q +      ++++Y D
Subjt:  QDFDVILGMDWLSANHASIDYFGKEV---------IFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREYPD

Query:  VFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVIVKNRY
        +   +   L    +   TI  + +    S+  Y  A  +  E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ IDYR+LN++ V +R+
Subjt:  VFLDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVIVKNRY

Query:  PLPRIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEE
        P+P +D++  +L     F+ IDL  G+HQ  +    + KTAF ++ G                                   +++D+I+++S    EH +
Subjt:  PLPRIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEE

Query:  HLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPF-VWS
         L  V E L    L  +  KCEF  ++ TFLGHV++ +G+  +P KIEA+  +P  +   EI++FLGL  YYR+F+ +F+ +A P+T+  +K       +
Subjt:  HLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPF-VWS

Query:  LVCESSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKS
           +S+F++LK   +   P+L VPD +  F + +DAS   LG VL Q G  ++Y S  L  HE NY T + EL A+V+A K +RHYL G   +I +DH+ 
Subjt:  LVCESSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKS

Query:  LKYFFTQKGLNMRQRRW
        L + +  K  N +  RW
Subjt:  LKYFFTQKGLNMRQRRW

P0CT42 Transposon Tf2-7 polyprotein1.7e-5831.7Show/hide
Query:  REQEVPLSSEPVVREYPDVF----LDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +E E+P     + +E+ D+      +KLP   P + ++F +EL  +   +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R
Subjt:  REQEVPLSSEPVVREYPDVF----LDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITI
        + +DY+ LNK +  N YPLP I+ L  ++QG+T+F+K+DL+S YH  R+R  D  K AFR   G                                 +  
Subjt:  LCIDYRELNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITI

Query:  FIDNILIYSKIEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLA
        ++DNILI+SK E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +     E+R FLG  NY R+F+   S+L 
Subjt:  FIDNILIYSKIEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLA

Query:  SPLTQLTRKGTPFVWSLVCESSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-----RVVAYASPGLKSHEQNYPTHDLELAAVVFA
         PL  L +K   + W+     + + +K Q LVS PVL   D S   ++ +DAS   +G VL Q+        V Y S  +   + NY   D E+ A++ +
Subjt:  SPLTQLTRKGTPFVWSLVCESSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-----RVVAYASPGLKSHEQNYPTHDLELAAVVFA

Query:  LKIWRHYLYG--DRIQIFADHKSLKYFFTQKG--LNMRQRRWLELVKD
        LK WRHYL    +  +I  DH++L    T +    N R  RW   ++D
Subjt:  LKIWRHYLYG--DRIQIFADHKSLKYFFTQKG--LNMRQRRWLELVKD

P0CT43 Transposon Tf2-8 polyprotein1.7e-5831.7Show/hide
Query:  REQEVPLSSEPVVREYPDVF----LDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +E E+P     + +E+ D+      +KLP   P + ++F +EL  +   +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R
Subjt:  REQEVPLSSEPVVREYPDVF----LDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITI
        + +DY+ LNK +  N YPLP I+ L  ++QG+T+F+K+DL+S YH  R+R  D  K AFR   G                                 +  
Subjt:  LCIDYRELNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITI

Query:  FIDNILIYSKIEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLA
        ++DNILI+SK E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +     E+R FLG  NY R+F+   S+L 
Subjt:  FIDNILIYSKIEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLA

Query:  SPLTQLTRKGTPFVWSLVCESSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-----RVVAYASPGLKSHEQNYPTHDLELAAVVFA
         PL  L +K   + W+     + + +K Q LVS PVL   D S   ++ +DAS   +G VL Q+        V Y S  +   + NY   D E+ A++ +
Subjt:  SPLTQLTRKGTPFVWSLVCESSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-----RVVAYASPGLKSHEQNYPTHDLELAAVVFA

Query:  LKIWRHYLYG--DRIQIFADHKSLKYFFTQKG--LNMRQRRWLELVKD
        LK WRHYL    +  +I  DH++L    T +    N R  RW   ++D
Subjt:  LKIWRHYLYG--DRIQIFADHKSLKYFFTQKG--LNMRQRRWLELVKD

P20825 Retrovirus-related Pol polyprotein from transposon 2974.1e-6032.91Show/hide
Query:  APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLRS
        +PI    Y +A     E++ Q+QE+L++G IR S SP+ +P   V KK         R+ IDYR+LN++ + +RYP+P +D++  +L     F+ IDL  
Subjt:  APISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCIDYRELNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLRS

Query:  GYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLHQVLETLRANKLYAKFSKCEFWL
        G+HQ  +    I KTAF +++G                                   +++D+I+I+S    EH   +  V   L    L  +  KCEF  
Subjt:  GYHQRRIRNSDIPKTAFRSRTG---------------------------------ITIFIDNILIYSKIEAEHEEHLHQVLETLRANKLYAKFSKCEFWL

Query:  KKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPF-VWSLVCESSFQELKQQKLVSTPVLTVPD
        K+  FLGH+V+ +G+  +P K++A+ S+P  +   EIR+FLGL  YYR+F+ +++ +A P+T   +K T      L    +F++LK   ++  P+L +PD
Subjt:  KKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPF-VWSLVCESSFQELKQQKLVSTPVLTVPD

Query:  GSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYFFTQKGLNMRQRRW
            FV+ +DAS   LG VL Q G  +++ S  L  HE NY   + EL A+V+A K +RHYL G +  I +DH+ L++    K    +  RW
Subjt:  GSGSFVIYSDASKKGLGCVLMQQGRVVAYASPGLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYFFTQKGLNMRQRRW

Q9UR07 Transposon Tf2-11 polyprotein1.7e-5831.7Show/hide
Query:  REQEVPLSSEPVVREYPDVF----LDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
        +E E+P     + +E+ D+      +KLP   P + ++F +EL  +   +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R
Subjt:  REQEVPLSSEPVVREYPDVF----LDKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR

Query:  LCIDYRELNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITI
        + +DY+ LNK +  N YPLP I+ L  ++QG+T+F+K+DL+S YH  R+R  D  K AFR   G                                 +  
Subjt:  LCIDYRELNKVIVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTG---------------------------------ITI

Query:  FIDNILIYSKIEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLA
        ++DNILI+SK E+EH +H+  VL+ L+   L    +KCEF   +V F+G+ +S +G +     I+ V  W +     E+R FLG  NY R+F+   S+L 
Subjt:  FIDNILIYSKIEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLA

Query:  SPLTQLTRKGTPFVWSLVCESSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-----RVVAYASPGLKSHEQNYPTHDLELAAVVFA
         PL  L +K   + W+     + + +K Q LVS PVL   D S   ++ +DAS   +G VL Q+        V Y S  +   + NY   D E+ A++ +
Subjt:  SPLTQLTRKGTPFVWSLVCESSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQG-----RVVAYASPGLKSHEQNYPTHDLELAAVVFA

Query:  LKIWRHYLYG--DRIQIFADHKSLKYFFTQKG--LNMRQRRWLELVKD
        LK WRHYL    +  +I  DH++L    T +    N R  RW   ++D
Subjt:  LKIWRHYLYG--DRIQIFADHKSLKYFFTQKG--LNMRQRRWLELVKD

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein1.2e-2240.15Show/hide
Query:  HLHQVLETLRANKLYAKFSKCEFWLKKVTFLG--HVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVW
        HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  WP     +E+R FLGL  YYRRFV+++ ++  PLT+L +K +   W
Subjt:  HLHQVLETLRANKLYAKFSKCEFWLKKVTFLG--HVVSSEGVSVDPAKIEAVTSWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVW

Query:  SLVCESSFQELKQQKLVSTPVLTVPDGSGSFV
        + +   +F+ LK   + + PVL +PD    FV
Subjt:  SLVCESSFQELKQQKLVSTPVLTVPDGSGSFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGATGTGACCTTACTAGTGTTAGACATGCAAGATTTTGATGTAATCCTAGGCATGGATTGGTTGTCTGCTAACCATGCAAGTATAGACTATTTCGGTAAG
GAAGTCATTTTTAACCCTCCCTCTGGGACTAGTTTCAAATTTAAGGGGGCAGGAATCGTATGTATACCCAAGGTCATCTCGGCCATGAAGGCTAGTAAACTACTC
AGCCAGGGTACCTGGAGCATCTTGGCAAGCATAGTAGATACCCGAGAACAAGAAGTTCCCTTGTCCTCCGAACCAGTGGTACGGGAGTACCCCGATGTTTTTCTC
GACAAGCTTCCTGGACTTCCGCCTCCCAGGAAGATAGACTTCACCATCGAGTTAGAGCCAGACACTGCTCCTATCTCGAGGGCCCCTTACAGAATGGCCCCAGCT
GAGCTAAAGGAGCTGAAGGTGCAGTTGCAGGAGTTACTAGATAAGGGTTTTATTCGACCCAGTGTGTCACCTTGGGGAGCACCAGTGTTGTTTGTGAAGAAGAAG
GATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAATAAGGTGATAGTCAAGAACCGTTACCCCTTACCCAGGATTGATGATTTGTTCGATCAGTTGCAA
GGAGCCACCGTCTTTTCCAAGATCGACCTACGATCAGGCTACCACCAGCGGAGGATCAGGAACAGTGATATTCCTAAGACCGCTTTCCGTTCCAGAACGGGCATT
ACGATTTTTATTGACAACATTTTGATTTACTCCAAGATTGAGGCTGAGCATGAGGAGCATTTGCATCAAGTTTTGGAGACTCTTCGAGCTAATAAGTTGTATGCC
AAGTTTTCCAAGTGTGAGTTTTGGCTGAAGAAGGTGACTTTTCTCGGCCATGTGGTTTCTAGTGAGGGAGTTTCTGTGGACCCAGCAAAGATCGAAGCGGTTACC
AGTTGGCCTCGATTGTCTACAGTTAGCGAGATTCGTAGTTTCCTGGGTTTAGCAAATTACTACAGGAGATTTGTGGAAGACTTCTCTCGTTTAGCCAGTCCCTTG
ACTCAGTTGACCAGGAAGGGGACTCCTTTTGTTTGGAGCCTAGTGTGTGAGAGTAGCTTCCAGGAACTTAAGCAGCAGAAGCTTGTGTCTACACCAGTCTTGACA
GTACCAGATGGATCTGGAAGTTTCGTGATCTATAGTGATGCCTCAAAGAAAGGACTGGGTTGTGTTCTGATGCAGCAAGGTAGAGTAGTTGCTTATGCCTCCCCC
GGGTTGAAGAGTCATGAGCAGAACTATCCTACCCATGACCTAGAGTTGGCAGCAGTGGTTTTTGCATTGAAGATATGGAGGCACTACCTGTACGGTGACAGGATA
CAGATTTTCGCTGACCATAAGAGCCTAAAGTACTTCTTCACCCAGAAGGGGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTAGTGAAAGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAGATGTGACCTTACTAGTGTTAGACATGCAAGATTTTGATGTAATCCTAGGCATGGATTGGTTGTCTGCTAACCATGCAAGTATAGACTATTTCGGTAAG
GAAGTCATTTTTAACCCTCCCTCTGGGACTAGTTTCAAATTTAAGGGGGCAGGAATCGTATGTATACCCAAGGTCATCTCGGCCATGAAGGCTAGTAAACTACTC
AGCCAGGGTACCTGGAGCATCTTGGCAAGCATAGTAGATACCCGAGAACAAGAAGTTCCCTTGTCCTCCGAACCAGTGGTACGGGAGTACCCCGATGTTTTTCTC
GACAAGCTTCCTGGACTTCCGCCTCCCAGGAAGATAGACTTCACCATCGAGTTAGAGCCAGACACTGCTCCTATCTCGAGGGCCCCTTACAGAATGGCCCCAGCT
GAGCTAAAGGAGCTGAAGGTGCAGTTGCAGGAGTTACTAGATAAGGGTTTTATTCGACCCAGTGTGTCACCTTGGGGAGCACCAGTGTTGTTTGTGAAGAAGAAG
GATGGGTCGATGCGCCTTTGCATTGACTACAGAGAGCTGAATAAGGTGATAGTCAAGAACCGTTACCCCTTACCCAGGATTGATGATTTGTTCGATCAGTTGCAA
GGAGCCACCGTCTTTTCCAAGATCGACCTACGATCAGGCTACCACCAGCGGAGGATCAGGAACAGTGATATTCCTAAGACCGCTTTCCGTTCCAGAACGGGCATT
ACGATTTTTATTGACAACATTTTGATTTACTCCAAGATTGAGGCTGAGCATGAGGAGCATTTGCATCAAGTTTTGGAGACTCTTCGAGCTAATAAGTTGTATGCC
AAGTTTTCCAAGTGTGAGTTTTGGCTGAAGAAGGTGACTTTTCTCGGCCATGTGGTTTCTAGTGAGGGAGTTTCTGTGGACCCAGCAAAGATCGAAGCGGTTACC
AGTTGGCCTCGATTGTCTACAGTTAGCGAGATTCGTAGTTTCCTGGGTTTAGCAAATTACTACAGGAGATTTGTGGAAGACTTCTCTCGTTTAGCCAGTCCCTTG
ACTCAGTTGACCAGGAAGGGGACTCCTTTTGTTTGGAGCCTAGTGTGTGAGAGTAGCTTCCAGGAACTTAAGCAGCAGAAGCTTGTGTCTACACCAGTCTTGACA
GTACCAGATGGATCTGGAAGTTTCGTGATCTATAGTGATGCCTCAAAGAAAGGACTGGGTTGTGTTCTGATGCAGCAAGGTAGAGTAGTTGCTTATGCCTCCCCC
GGGTTGAAGAGTCATGAGCAGAACTATCCTACCCATGACCTAGAGTTGGCAGCAGTGGTTTTTGCATTGAAGATATGGAGGCACTACCTGTACGGTGACAGGATA
CAGATTTTCGCTGACCATAAGAGCCTAAAGTACTTCTTCACCCAGAAGGGGTTGAACATGAGGCAGAGGAGGTGGCTTGAGTTAGTGAAAGACTAG
Protein sequenceShow/hide protein sequence
MLDVTLLVLDMQDFDVILGMDWLSANHASIDYFGKEVIFNPPSGTSFKFKGAGIVCIPKVISAMKASKLLSQGTWSILASIVDTREQEVPLSSEPVVREYPDVFL
DKLPGLPPPRKIDFTIELEPDTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVIVKNRYPLPRIDDLFDQLQ
GATVFSKIDLRSGYHQRRIRNSDIPKTAFRSRTGITIFIDNILIYSKIEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVT
SWPRLSTVSEIRSFLGLANYYRRFVEDFSRLASPLTQLTRKGTPFVWSLVCESSFQELKQQKLVSTPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGRVVAYASP
GLKSHEQNYPTHDLELAAVVFALKIWRHYLYGDRIQIFADHKSLKYFFTQKGLNMRQRRWLELVKD