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Cmc04g0108631 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0108631
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUbiquitin ligase SINAT3
Genome locationCMiso1.1chr04:28156834..28157731
RNA-Seq ExpressionCmc04g0108631
SyntenyCmc04g0108631
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAS88524.1 Os04g0310900, partial [Oryza sativa Japonica Group]3.1e-0837.11Show/hide
Query:  MSQQQSFQFRRSHLKSLVLNQFLQPIHNEQLVIFVDESDIPGVQPPILVDCGRRCLRIVEIAFHDLIASDADLSRRVTRQGTAGFGVDDLHLGVSDD
        + ++   +     LK LVL+Q L P+H+E + + VD  ++ GVQPP+ V    R L  + +  H  +A  A L RRV RQ   G  V +LHL V  D
Subjt:  MSQQQSFQFRRSHLKSLVLNQFLQPIHNEQLVIFVDESDIPGVQPPILVDCGRRCLRIVEIAFHDLIASDADLSRRVTRQGTAGFGVDDLHLGVSDD

KAB8095222.1 hypothetical protein EE612_023059, partial [Oryza sativa]8.2e-0938.14Show/hide
Query:  MSQQQSFQFRRSHLKSLVLNQFLQPIHNEQLVIFVDESDIPGVQPPILVDCGRRCLRIVEIAFHDLIASDADLSRRVTRQGTAGFGVDDLHLGVSDD
        + ++   +     LK LVL+Q L P+H+E + + VD  D+ GVQPP+ V    R L  + +  H  +A  A L RRV RQ   G  V +LHL V  D
Subjt:  MSQQQSFQFRRSHLKSLVLNQFLQPIHNEQLVIFVDESDIPGVQPPILVDCGRRCLRIVEIAFHDLIASDADLSRRVTRQGTAGFGVDDLHLGVSDD

ONM28185.1 Ubiquitin ligase SINAT3 [Zea mays]1.8e-0840.21Show/hide
Query:  QQQSFQFRRSHLKSLVLNQFLQPIHNEQLVIFVDESDIPGVQPPILVDCGRRCLRIVEIAFHDLIASDADLSRRVTRQGTAGFGVDDLHLGVSDDGA
        QQ   Q  R  L++LVL++ L  +H+E + + VD  D+  V+PP  VD   R L +  +A H  +A  ADL RRV  Q     GV +LHL V  D A
Subjt:  QQQSFQFRRSHLKSLVLNQFLQPIHNEQLVIFVDESDIPGVQPPILVDCGRRCLRIVEIAFHDLIASDADLSRRVTRQGTAGFGVDDLHLGVSDDGA

TrEMBL top hitse value%identityAlignment
A0A0P0W8E4 Os04g0310900 protein (Fragment)1.5e-0837.11Show/hide
Query:  MSQQQSFQFRRSHLKSLVLNQFLQPIHNEQLVIFVDESDIPGVQPPILVDCGRRCLRIVEIAFHDLIASDADLSRRVTRQGTAGFGVDDLHLGVSDD
        + ++   +     LK LVL+Q L P+H+E + + VD  ++ GVQPP+ V    R L  + +  H  +A  A L RRV RQ   G  V +LHL V  D
Subjt:  MSQQQSFQFRRSHLKSLVLNQFLQPIHNEQLVIFVDESDIPGVQPPILVDCGRRCLRIVEIAFHDLIASDADLSRRVTRQGTAGFGVDDLHLGVSDD

A0A182JKN5 Uncharacterized protein7.7e-0537.66Show/hide
Query:  SLVLNQFLQPIHNEQLVIFVDESDIPGVQPPILVDCGRRCLRIVEIAFHDLIASDADLSRRVTRQGTAGFGVDDLHL
        ++VL+Q LQPI++E+L + V E+ I  VQP + +D G R L + ++  H L A++A L+  V  +      +D LHL
Subjt:  SLVLNQFLQPIHNEQLVIFVDESDIPGVQPPILVDCGRRCLRIVEIAFHDLIASDADLSRRVTRQGTAGFGVDDLHL

A0A182Q3C3 Uncharacterized protein3.5e-0536.56Show/hide
Query:  QQQSFQFRRSHLKSLVLNQFLQPIHNEQLVIFVDESDIPGVQPPILVD---CGRRCLRIVEIAFHDLIASDADLSRRVTRQGTAGFGVDDLHL
        QQ      R HL +LVL+Q LQP+ + +L + V   ++ GVQP + VD   CGR   R+ ++  HDL  ++A L+  V  +      +D LHL
Subjt:  QQQSFQFRRSHLKSLVLNQFLQPIHNEQLVIFVDESDIPGVQPPILVD---CGRRCLRIVEIAFHDLIASDADLSRRVTRQGTAGFGVDDLHL

A0A1D6MEX3 Ubiquitin ligase SINAT38.8e-0940.21Show/hide
Query:  QQQSFQFRRSHLKSLVLNQFLQPIHNEQLVIFVDESDIPGVQPPILVDCGRRCLRIVEIAFHDLIASDADLSRRVTRQGTAGFGVDDLHLGVSDDGA
        QQ   Q  R  L++LVL++ L  +H+E + + VD  D+  V+PP  VD   R L +  +A H  +A  ADL RRV  Q     GV +LHL V  D A
Subjt:  QQQSFQFRRSHLKSLVLNQFLQPIHNEQLVIFVDESDIPGVQPPILVDCGRRCLRIVEIAFHDLIASDADLSRRVTRQGTAGFGVDDLHLGVSDDGA

A0A7S3KMU3 Hypothetical protein (Fragment)3.1e-0631.91Show/hide
Query:  MSQQQSFQFRRSHLKSLVLNQFLQPIHNEQLVIFVDESDIPGVQPPILVDCGRRCLRIVEIAFHDLIASDADLSRRVTRQGTAGFGVDDLHLGV
        +  ++  +    HL++LVL+Q L+ +++  + + V  +++ GV+P +LV+     + +VE+A HDL   DADL+   + +  AG  +D L LGV
Subjt:  MSQQQSFQFRRSHLKSLVLNQFLQPIHNEQLVIFVDESDIPGVQPPILVDCGRRCLRIVEIAFHDLIASDADLSRRVTRQGTAGFGVDDLHLGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCAACAACAGAGCTTCCAGTTCCGCCGGAGCCACTTGAAATCCCTTGTACTTAATCAGTTCCTTCAACCGATCCACAATGAACAGCTCGTCATCTTCGTC
GATGAATCCGATATCCCCGGTGTGCAACCACCCATCCTTGTCGATTGTGGCCGCCGTTGCCTCCGGATTGTTGAGATAGCCTTTCATGATTTGATCGCCTCTGAT
GCAGATCTCTCCCGGCGTGTTACGAGGCAAGGAACTGCCGGTTTCGGTGTCGACGATCTTCATCTCGGCGTTTCTGACGACGGTGCCGCAGGCGCCTGGTTTCAT
CGGAAACGGTTCCTTTGCAAATGCTAA
mRNA sequenceShow/hide mRNA sequence
TTTTGCAAGAATGACTAGAAATATCAATAAAATGTGATGTCAATATAATTTCAGAAAAAATTATAAGAAGCAGTTAATAATTTTAAAAAATAGAATTCAAATTTG
TTAAGGAAAAAAAAAACAGATACCTGTTTTGAAATAAATTGTTTAATTTCATCTTCAGTGGCTTCAGAATTCTTCAATTTCACAACGAACGCGACCGGAACTTCT
CCAGCTTGTTCATCTTTCATTCTGCAATATCAATCCACACAAAATTAACCCAACAATCATCACCCAGCCGGAATCCAAATTCAATTCATTATTCTTACGGAACAA
CGGCGGCATCAGAGATGACCGGATGAGTCAACAACAGAGCTTCCAGTTCCGCCGGAGCCACTTGAAATCCCTTGTACTTAATCAGTTCCTTCAACCGATCCACAA
TGAACAGCTCGTCATCTTCGTCGATGAATCCGATATCCCCGGTGTGCAACCACCCATCCTTGTCGATTGTGGCCGCCGTTGCCTCCGGATTGTTGAGATAGCCTT
TCATGATTTGATCGCCTCTGATGCAGATCTCTCCCGGCGTGTTACGAGGCAAGGAACTGCCGGTTTCGGTGTCGACGATCTTCATCTCGGCGTTTCTGACGACGG
TGCCGCAGGCGCCTGGTTTCATCGGAAACGGTTCCTTTGCAAATGCTAATCCCATTGTTAGTACTGGACCCGCCTCCGTCATTCCGTATCCCTACAATCATCCAA
CGGTTATTATTGTTATGCCACGTGGGCAAATATATTTATCTTAATATTAAATATAAAGTTTAACACTCGGAAGTTTAATGTTGTAATTTTATGGAAAACGTAAGT
TATTGTAAAGTTTTCGGTTATGATAGACAAATATTTACAACTAAATTTCATCTTCTAG
Protein sequenceShow/hide protein sequence
MSQQQSFQFRRSHLKSLVLNQFLQPIHNEQLVIFVDESDIPGVQPPILVDCGRRCLRIVEIAFHDLIASDADLSRRVTRQGTAGFGVDDLHLGVSDDGAAGAWFH
RKRFLCKC