CuGenDBv2

Gene ID	Cmc04g0109241
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	SWIM-type domain-containing protein
Genome location	CMiso1.1chr04:28743283..28744278
RNA-Seq Expression	Cmc04g0109241
Synteny	Cmc04g0109241
Gene Ontology terms	GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR004332 - Transposase, MuDR, plant IPR018289 - MULE transposase domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0031318.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]

1.6e-137

96.06

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Query:  DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSS
        DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSN+KSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQA +S
Subjt:  DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSS

Query:  LISDCIVKDFSSFDCSTPNDIMIHMRTKLGVN-CYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGW
        LISDCI KDFSSFD STPNDIMIHMRTKLGVN  YYKAWRAKELVMNSLNGEAKESYALI NFFMKLKEIN GSFTAYETDT+GHFKYCFMAIGACIEGW
Subjt:  LISDCIVKDFSSFDCSTPNDIMIHMRTKLGVN-CYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGW

Query:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
        KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
Subjt:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF

KAA0059897.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]

3.6e-137

95.67

Show/hide

Query:  DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSS
        DIHVSSLSSTFDLKEKDMFA+KELLSKSFYYIAIKNNFEFKTVRSN+KSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQA +S
Subjt:  DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSS

Query:  LISDCIVKDFSSFDCSTPNDIMIHMRTKLGVN-CYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGW
        LISDCI KDFSSFD STPNDIMIHMRTKLGVN  YYKAWRAKELVMNSLNGEAKESYALI NFFMKLKEIN GSFTAYETDT+GHFKYCFMAIGACIEGW
Subjt:  LISDCIVKDFSSFDCSTPNDIMIHMRTKLGVN-CYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGW

Query:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
        KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
Subjt:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF

KAA0065296.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]

2.3e-136

95.28

Show/hide

Query:  DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSS
        DIHVSS SSTFDLKE DMFASKELLSKSFYYIAIKNNFEFKTVRSN+KSIEFKCSQDNCPWYVRASRYKGG+LWRLRKYIANHNCSINVIQTTHKQA SS
Subjt:  DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSS

Query:  LISDCIVKDFSSFDCSTPNDIMIHMRTKLGVN-CYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGW
        LISDCI KDFSSFD STPNDIMIHMRTKLGVN  YYKAWRAKELVMNSLNGEAKESYALI NFFMKLKEIN GSFTAYETDT+GHFKYCFMAIGACIEGW
Subjt:  LISDCIVKDFSSFDCSTPNDIMIHMRTKLGVN-CYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGW

Query:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
        KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
Subjt:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF

TYK09469.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]

1.6e-137

96.06

Show/hide

Query:  DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSS
        DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSN+KSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQA +S
Subjt:  DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSS

Query:  LISDCIVKDFSSFDCSTPNDIMIHMRTKLGVN-CYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGW
        LISDCI KDFSSFD STPNDIMIHMRTKLGVN  YYKAWRAKELVMNSLNGEAKESYALI NFFMKLKEIN GSFTAYETDT+GHFKYCFMAIGACIEGW
Subjt:  LISDCIVKDFSSFDCSTPNDIMIHMRTKLGVN-CYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGW

Query:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
        KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
Subjt:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF

TYK23827.1 MuDR family transposase [Cucumis melo var. makuwa]

7.2e-138

96.46

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Query:  DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSS
        DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSN+KSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQA SS
Subjt:  DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSS

Query:  LISDCIVKDFSSFDCSTPNDIMIHMRTKLGVN-CYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGW
        LISDCI KDFSSFD STPNDIMIHMRTKLGVN  YYKAWRAKELVMNSLNGEAKESYALI NFFMKLKEIN GSFTAYETDT+GHFKYCFMAIGACIEGW
Subjt:  LISDCIVKDFSSFDCSTPNDIMIHMRTKLGVN-CYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGW

Query:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
        KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
Subjt:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T3G5 Protein FAR1-RELATED SEQUENCE 4-like

7.8e-138

96.06

Show/hide

Query:  DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSS
        DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSN+KSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQA +S
Subjt:  DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSS

Query:  LISDCIVKDFSSFDCSTPNDIMIHMRTKLGVN-CYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGW
        LISDCI KDFSSFD STPNDIMIHMRTKLGVN  YYKAWRAKELVMNSLNGEAKESYALI NFFMKLKEIN GSFTAYETDT+GHFKYCFMAIGACIEGW
Subjt:  LISDCIVKDFSSFDCSTPNDIMIHMRTKLGVN-CYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGW

Query:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
        KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
Subjt:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF

A0A5A7UZ18 Protein FAR1-RELATED SEQUENCE 4-like

1.7e-137

95.67

Show/hide

Query:  DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSS
        DIHVSSLSSTFDLKEKDMFA+KELLSKSFYYIAIKNNFEFKTVRSN+KSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQA +S
Subjt:  DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSS

Query:  LISDCIVKDFSSFDCSTPNDIMIHMRTKLGVN-CYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGW
        LISDCI KDFSSFD STPNDIMIHMRTKLGVN  YYKAWRAKELVMNSLNGEAKESYALI NFFMKLKEIN GSFTAYETDT+GHFKYCFMAIGACIEGW
Subjt:  LISDCIVKDFSSFDCSTPNDIMIHMRTKLGVN-CYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGW

Query:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
        KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
Subjt:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF

A0A5A7VG38 Protein FAR1-RELATED SEQUENCE 4-like

1.1e-136

95.28

Show/hide

Query:  DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSS
        DIHVSS SSTFDLKE DMFASKELLSKSFYYIAIKNNFEFKTVRSN+KSIEFKCSQDNCPWYVRASRYKGG+LWRLRKYIANHNCSINVIQTTHKQA SS
Subjt:  DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSS

Query:  LISDCIVKDFSSFDCSTPNDIMIHMRTKLGVN-CYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGW
        LISDCI KDFSSFD STPNDIMIHMRTKLGVN  YYKAWRAKELVMNSLNGEAKESYALI NFFMKLKEIN GSFTAYETDT+GHFKYCFMAIGACIEGW
Subjt:  LISDCIVKDFSSFDCSTPNDIMIHMRTKLGVN-CYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGW

Query:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
        KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
Subjt:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF

A0A5D3DAW8 Protein FAR1-RELATED SEQUENCE 4-like

7.8e-138

96.06

Show/hide

Query:  DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSS
        DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSN+KSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQA +S
Subjt:  DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSS

Query:  LISDCIVKDFSSFDCSTPNDIMIHMRTKLGVN-CYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGW
        LISDCI KDFSSFD STPNDIMIHMRTKLGVN  YYKAWRAKELVMNSLNGEAKESYALI NFFMKLKEIN GSFTAYETDT+GHFKYCFMAIGACIEGW
Subjt:  LISDCIVKDFSSFDCSTPNDIMIHMRTKLGVN-CYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGW

Query:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
        KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
Subjt:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF

A0A5D3DJR8 MuDR family transposase

3.5e-138

96.46

Show/hide

Query:  DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSS
        DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSN+KSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQA SS
Subjt:  DIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSS

Query:  LISDCIVKDFSSFDCSTPNDIMIHMRTKLGVN-CYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGW
        LISDCI KDFSSFD STPNDIMIHMRTKLGVN  YYKAWRAKELVMNSLNGEAKESYALI NFFMKLKEIN GSFTAYETDT+GHFKYCFMAIGACIEGW
Subjt:  LISDCIVKDFSSFDCSTPNDIMIHMRTKLGVN-CYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGW

Query:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
        KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
Subjt:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G64260.1 MuDR family transposase

3.7e-15

24.8

Show/hide

Query:  FASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSSLISDCIVKDFSSFDCSTP
        F  ++ L K+  +  I+         +  +   F+C +  C W +RA+R +   L  + KY   H CS       H+             DF S   +  
Subjt:  FASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSSLISDCIVKDFSSFDCSTP

Query:  NDIMIHMRTKLGVNCYYKAWRAK---EL-----------VMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETD-----TKGHFKYCFMAIGACIEGW
         + ++ ++  L +    K W+ K   EL           V+  + G+  +S+ ++          N G    ++ D         F+  F +    IEG+
Subjt:  NDIMIHMRTKLGVNCYYKAWRAK---EL-----------VMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETD-----TKGHFKYCFMAIGACIEGW

Query:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF
        ++CRP I VD   L  KY   L+ AS +D  N+ FPLAF++    +  SWRWFF
Subjt:  KYCRPNISVDGTFLKSKYGGTLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGATATTCATGTTAGTAGCTTGTCTTCTACATTCGATTTGAAAGAAAAGGATATGTTTGCTAGCAAGGAACTACTATCAAAGTCATTTTACTACATTGCTATAAAGAA
CAATTTTGAGTTCAAGACTGTGAGATCAAATACTAAATCTATTGAGTTTAAGTGCTCCCAAGATAATTGTCCGTGGTATGTCCGTGCATCTCGTTACAAGGGTGGGGAAT
TATGGCGACTAAGGAAGTATATTGCTAATCACAATTGCTCCATAAATGTTATTCAAACTACTCATAAACAAGCATTTTCATCATTGATTAGTGATTGTATTGTAAAAGAC
TTTAGTTCTTTTGACTGTTCGACTCCAAATGATATTATGATTCACATGCGTACTAAACTTGGTGTAAATTGCTACTACAAAGCGTGGAGGGCAAAGGAACTTGTTATGAA
TTCTTTGAATGGTGAAGCAAAAGAATCTTATGCCTTGATTCTAAACTTTTTTATGAAACTAAAAGAAATTAACCTAGGTTCATTCACTGCTTATGAAACTGATACAAAGG
GACATTTTAAGTACTGTTTTATGGCTATTGGAGCATGCATTGAAGGATGGAAATATTGTAGGCCCAACATATCAGTTGACGGTACATTTTTGAAATCTAAATATGGTGGA
ACTCTTTTGACAGCCTCAACAATTGATGGTAATAATCAAATTTTCCCATTGGCCTTTAGTATTGTAGATTCTGAAAATGATGCATCATGGAGATGGTTTTTTTAG

mRNA sequence

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Protein sequence

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MDIHVSSLSSTFDLKEKDMFASKELLSKSFYYIAIKNNFEFKTVRSNTKSIEFKCSQDNCPWYVRASRYKGGELWRLRKYIANHNCSINVIQTTHKQAFSSLISDCIVKD
FSSFDCSTPNDIMIHMRTKLGVNCYYKAWRAKELVMNSLNGEAKESYALILNFFMKLKEINLGSFTAYETDTKGHFKYCFMAIGACIEGWKYCRPNISVDGTFLKSKYGG
TLLTASTIDGNNQIFPLAFSIVDSENDASWRWFF

Cmc04g0109241 (gene) of Melon (Charmono) v1.1 genome