; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0109251 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0109251
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionCysteine desulfurase
Genome locationCMiso1.1chr04:28753224..28753602
RNA-Seq ExpressionCmc04g0109251
SyntenyCmc04g0109251
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsIPR000192 - Aminotransferase class V domain
IPR015421 - Pyridoxal phosphate-dependent transferase, major domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAL57235.1 cysteine desulfurase / selenocysteine lyase [uncultured Chloroflexi bacterium]3.3e-0661.9Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLTIPHLHNLVPS
        +MCGPTGIG LYGK+ LL AMPPFL GGD +   HL +  P+
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLTIPHLHNLVPS

CAN74051.1 hypothetical protein VITISV_014856 [Vitis vinifera]3.3e-0678.12Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLT
        +MCGPTGIGFLYGK DLLFAMPPFL GG+ ++
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLT

KAA0051256.1 reverse transcriptase [Cucumis melo var. makuwa]1.7e-1595.24Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLTIPHLHNLVPS
        +MCGPT IGFLYGKIDLLFAMPPFLDGGDFLTIPHLHNLVPS
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLTIPHLHNLVPS

MBO9368276.1 cysteine desulfurase [Chloroflexi bacterium]1.5e-0664.29Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLTIPHLHNLVPS
        +MCGPTGIG LYGK+ LL AMPPFL GGD +   HL + VP+
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLTIPHLHNLVPS

XP_002267920.1 PREDICTED: cysteine desulfurase 1, chloroplastic [Vitis vinifera]3.3e-0678.12Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLT
        +MCGPTGIGFLYGK DLLFAMPPFL GG+ ++
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLT

TrEMBL top hitse value%identityAlignment
A0A438CYE2 Cysteine desulfurase 1, chloroplastic1.6e-0678.12Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLT
        +MCGPTGIGFLYGK DLLFAMPPFL GG+ ++
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLT

A0A5A7UAM5 Reverse transcriptase8.4e-1695.24Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLTIPHLHNLVPS
        +MCGPT IGFLYGKIDLLFAMPPFLDGGDFLTIPHLHNLVPS
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLTIPHLHNLVPS

A5B1H4 Uncharacterized protein1.6e-0678.12Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLT
        +MCGPTGIGFLYGK DLLFAMPPFL GG+ ++
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLT

D7T1C8 Cysteine desulfurase1.6e-0678.12Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLT
        +MCGPTGIGFLYGK DLLFAMPPFL GG+ ++
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLT

H5SM49 Cysteine desulfurase1.6e-0661.9Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLTIPHLHNLVPS
        +MCGPTGIG LYGK+ LL AMPPFL GGD +   HL +  P+
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLTIPHLHNLVPS

SwissProt top hitse value%identityAlignment
D4GYV5 Cysteine desulfurase2.5e-0461.29Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFL
        +MCGPTGIG LYGK D+L  M P+L GG+ +
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFL

Q55793 Probable cysteine desulfurase7.6e-0664.52Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFL
        +MC PTGIGFLYGK ++L AMPPF  GG+ +
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFL

Q93WX6 Cysteine desulfurase 1, chloroplastic6.2e-0871.88Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLT
        +MCGPTGIGFLYGK DLL +MPPFL GG+ ++
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLT

Q9XAD5 Probable cysteine desulfurase2.9e-0550Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLTIPHLHN
        +MCGPTGIG L+G+ +LL  +PPFL GG+ +    +H+
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLTIPHLHN

Arabidopsis top hitse value%identityAlignment
AT1G08490.1 chloroplastic NIFS-like cysteine desulfurase4.4e-0971.88Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLT
        +MCGPTGIGFLYGK DLL +MPPFL GG+ ++
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAGATGTGTGGGCCTACAGGCATTGGATTCTTGTATGGAAAGATTGATCTATTGTTTGCAATGCCTCCATTCTTAGATGGTGGAGATTTCTTGACCATTCCACA
TTTGCACAACCTCGTTCCAAGTTAG
mRNA sequenceShow/hide mRNA sequence
GTGCTAGAGTGTTCCACATATGGTTGTCGACATCCAGACACTTGATGCTGACTTTCTTGTTGCTTCTTCTCACAAGGTTAGGTTGTTTTCTTATTAATTAAATGGCAAGC
CTTACATTTGGGCATATGAAGATAAGGAATAAACATGCTTCAGATGTGTGGGCCTACAGGCATTGGATTCTTGTATGGAAAGATTGATCTATTGTTTGCAATGCCTCCAT
TCTTAGATGGTGGAGATTTCTTGACCATTCCACATTTGCACAACCTCGTTCCAAGTTAG
Protein sequenceShow/hide protein sequence
MLQMCGPTGIGFLYGKIDLLFAMPPFLDGGDFLTIPHLHNLVPS