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Cmc04g0109671 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0109671
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionCysteine desulfurase
Genome locationCMiso1.1chr04:29040277..29043171
RNA-Seq ExpressionCmc04g0109671
SyntenyCmc04g0109671
Gene Ontology termsGO:0000122 - negative regulation of transcription by RNA polymerase II (biological process)
GO:0006325 - chromatin organization (biological process)
GO:0006534 - cysteine metabolic process (biological process)
GO:0007049 - cell cycle (biological process)
GO:0016575 - histone deacetylation (biological process)
GO:0051301 - cell division (biological process)
GO:1901566 - organonitrogen compound biosynthetic process (biological process)
GO:0000118 - histone deacetylase complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0004407 - histone deacetylase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
GO:0031071 - cysteine desulfurase activity (molecular function)
InterPro domainsIPR000192 - Aminotransferase class V domain
IPR015421 - Pyridoxal phosphate-dependent transferase, major domain
IPR015422 - Pyridoxal phosphate-dependent transferase, small domain
IPR015424 - Pyridoxal phosphate-dependent transferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061747.1 cysteine desulfurase 1 [Cucumis melo var. makuwa]3.2e-3984.47Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY
        +MCGPTGIGFLYGKIDLL AMPPFLG    I   FLD+STFAQP SRFEAGTPAIGEAIGLGAAIDYLS + M KIHSYEEELANYLYENLRAVPNIR+Y
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY

Query:  GPA
        GPA
Subjt:  GPA
KGN48344.2 hypothetical protein Csa_002961 [Cucumis sativus]6.4e-4085.44Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY
        +MCGPTGIGFLYGKIDLL AMPPFLG    I   FLD+STFAQP SRFEAGTPAIGEAIGLGAAIDYLS + MQKIHSYEEELANYLYENLRAVPNIR+Y
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY

Query:  GPA
        GPA
Subjt:  GPA
TYJ96087.1 cysteine desulfurase 1 [Cucumis melo var. makuwa]3.2e-3984.47Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY
        +MCGPTGIGFLYGKIDLL AMPPFLG    I   FLD+STFAQP SRFEAGTPAIGEAIGLGAAIDYLS + M KIHSYEEELANYLYENLRAVPNIR+Y
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY

Query:  GPA
        GPA
Subjt:  GPA
XP_004140178.2 cysteine desulfurase 1, chloroplastic [Cucumis sativus]6.4e-4085.44Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY
        +MCGPTGIGFLYGKIDLL AMPPFLG    I   FLD+STFAQP SRFEAGTPAIGEAIGLGAAIDYLS + MQKIHSYEEELANYLYENLRAVPNIR+Y
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY

Query:  GPA
        GPA
Subjt:  GPA
XP_038902898.1 cysteine desulfurase 1, chloroplastic [Benincasa hispida]1.9e-3984.47Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY
        +MCGPTGIGFLYGKIDLL AMPPFLG    I   FLD+STFAQP SRFEAGTPAIGEAIGLGAAIDYLS + MQKIHSYEEELANYLYENLR VPNIR+Y
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY

Query:  GPA
        GPA
Subjt:  GPA
TrEMBL top hitse value%identityAlignment
A0A0A0KEG9 Cysteine desulfurase3.1e-4085.44Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY
        +MCGPTGIGFLYGKIDLL AMPPFLG    I   FLD+STFAQP SRFEAGTPAIGEAIGLGAAIDYLS + MQKIHSYEEELANYLYENLRAVPNIR+Y
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY

Query:  GPA
        GPA
Subjt:  GPA
A0A1S3BLT6 Cysteine desulfurase1.5e-3984.47Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY
        +MCGPTGIGFLYGKIDLL AMPPFLG    I   FLD+STFAQP SRFEAGTPAIGEAIGLGAAIDYLS + M KIHSYEEELANYLYENLRAVPNIR+Y
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY

Query:  GPA
        GPA
Subjt:  GPA
A0A5A7V4C2 B-like cyclin1.5e-3984.47Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY
        +MCGPTGIGFLYGKIDLL AMPPFLG    I   FLD+STFAQP SRFEAGTPAIGEAIGLGAAIDYLS + M KIHSYEEELANYLYENLRAVPNIR+Y
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY

Query:  GPA
        GPA
Subjt:  GPA
A0A5D3BAD5 B-like cyclin1.5e-3984.47Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY
        +MCGPTGIGFLYGKIDLL AMPPFLG    I   FLD+STFAQP SRFEAGTPAIGEAIGLGAAIDYLS + M KIHSYEEELANYLYENLRAVPNIR+Y
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY

Query:  GPA
        GPA
Subjt:  GPA
A0A6J1FVQ2 Cysteine desulfurase2.6e-3983.33Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY
        +MCGPTGIGFLYGKIDLL AMPPFLG    I   FLD+STFA+P SRFEAGTPAIGEAIGLGAAIDYLS + MQKIH+YEEELANYLYENLRAVPNIR+Y
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY

Query:  GP
        GP
Subjt:  GP
SwissProt top hitse value%identityAlignment
A9MEP3 Cysteine desulfurase3.2e-1850.48Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLGIWWRFLDYS-----TFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRL
        ++ GPTGIG LY K  LL  MPP+ G        S     T+A+   RFEAGTP  G  IGLGAAIDY++ + + KI  YE+ L +Y  E L  VP+IRL
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLGIWWRFLDYS-----TFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRL

Query:  YGPAQ
        YGPAQ
Subjt:  YGPAQ
D4GYV5 Cysteine desulfurase7.1e-1846.08Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFL--GIWWRFLDY--STFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY
        +MCGPTGIG LYGK D+L  M P+L  G   R + Y  ST+     +FEAGTP I + +G  AA+DYL  + M+ + ++EE LA Y Y+ L    +I +Y
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFL--GIWWRFLDY--STFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY

Query:  GP
        GP
Subjt:  GP
Q55793 Probable cysteine desulfurase1.2e-2555.88Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY
        +MC PTGIGFLYGK ++L AMPPF G    I   F D+ T  +   +FEAGTPAI EAI LGAA+DYL+ + M+ IH+YE EL +YL++ L  +P +RLY
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY

Query:  GP
        GP
Subjt:  GP
Q93WX6 Cysteine desulfurase 1, chloroplastic9.3e-3467.65Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY
        +MCGPTGIGFLYGK DLL +MPPFLG    I   FLD+ST+A+P SRFEAGTPAIGEAI LGAA+DYLS + M KIH YE E+  YLYE L ++P++R+Y
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY

Query:  GP
        GP
Subjt:  GP
Q9XAD5 Probable cysteine desulfurase5.8e-2048.04Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY
        +MCGPTGIG L+G+ +LL  +PPFLG    I    +  ST+A    +FEAGTP + +A+GLGAAIDYL+ + M KI ++E  L  Y  + L  VP++R+ 
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY

Query:  GP
        GP
Subjt:  GP
Arabidopsis top hitse value%identityAlignment
AT1G08490.1 chloroplastic NIFS-like cysteine desulfurase6.6e-3567.65Show/hide
Query:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY
        +MCGPTGIGFLYGK DLL +MPPFLG    I   FLD+ST+A+P SRFEAGTPAIGEAI LGAA+DYLS + M KIH YE E+  YLYE L ++P++R+Y
Subjt:  QMCGPTGIGFLYGKIDLLFAMPPFLG----IWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLY

Query:  GP
        GP
Subjt:  GP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCAGATGTGTGGGCCTACGGGCATTGGATTCTTGTACGGAAAGATTGATCTATTGTTTGCAATGCCTCCATTCTTAGGTATATGGTGGAGATTTCTTGACTATTC
CACATTTGCACAACCTCGTTCCAGATTTGAAGCTGGGACGCCTGCAATTGGAGAAGCAATTGGTTTGGGAGCTGCTATTGATTATTTATCTAGGGTCGAAATGCAAAAAA
TTCATAGTTACGAAGAAGAATTGGCGAATTATCTATATGAAAACCTTCGTGCAGTTCCTAACATTCGGTTATATGGCCCAGCGCAATTTAGACTTTAG
mRNA sequenceShow/hide mRNA sequence
CCCAAAGAGCCAGTTATATAATTTAACAGTAAATTAGGGAACGAAGTTACCGGGTTTTTGGAATACATCGGCAACTCGGTTGGTTTGGAATGCGTCGAAGACTCGCTTGC
TTCAATGTTCGATCTGTTCTAGGGTTGATCAATTCCGTTACCAGAAAACAACAGTTGTTGTAAAGAGTCAACGTACAACGGATGCTTACTGTACAAATTTCAAAGATTTA
CGGTTGAGGGTTGCTGTCCGGAGCTCATAGGCGGCGCGTGAGGATGCGGATGGCTGGAAGGGTTTGACGGTTGGACATCCGATGGTGCGTAGAAGGGAATGGGCTGGGCG
ATGAGATGAAACGGCCCACGTGTCGGACAGGAGCGGCGCGTGAAGCATCTTCTGGTCAGACGGCGGCTCGTACGGCTGCGAAACCACTCCCGTTGGGTAGATTGGCAGTT
TCTGTAGGTTCTGGAGCAGTTTCTCCATGGCGGCGGCGGCAGTGACGGGTTCAGTTTCGATCTGGTTTTCTCCTAGGGTTTCGTTATTGCCTTGCTCTGATACCATATTG
AAAGCAATTAACAACAACCCGAGACTTACGTGGAAACCAGAGAACTGGGAGAAAAACCACGATACTTTAGCTTTTATTATTTTTCTTATGAATACAATTGGTACAAATGG
AGAAAATAAATAGAGTACAATAGGAGTAAGAAAGGAAAAGATCTAGGAAATATTTAGGAAATAAAATCTTATATATTATTCTTTTCAAAAATACTCTAAGGGCAAAGCCC
TACTAATTCTAACAGTAGGCTTTAAGGTTTTCTTTGTGAAGATTCTGATTTCAGATTTAAGTTAACGAAAGTGTTTTACATTCCTACATCATGAAGTTGCATCCTTTATC
TTTTTAAACATGTGTAGCCATATACTGCTTTAACTTTAAGTTTAAACTGTAACAATCTATTCTTTCAGTGCAGATCATACTTACGGTTGTTGAACATCATAGTGCCATTG
TTCCTTGGCAACTTATAGCTGAAAGGACCGGTGTTGTTATGAAGTTTGTTAGGTTGTTTTCTTATTAATTAAATGGCAAGCCTTACATTTGGGCATATGAAGATAAGGAA
TAAACATGCTTCAGATGTGTGGGCCTACGGGCATTGGATTCTTGTACGGAAAGATTGATCTATTGTTTGCAATGCCTCCATTCTTAGGTATATGGTGGAGATTTCTTGAC
TATTCCACATTTGCACAACCTCGTTCCAGATTTGAAGCTGGGACGCCTGCAATTGGAGAAGCAATTGGTTTGGGAGCTGCTATTGATTATTTATCTAGGGTCGAAATGCA
AAAAATTCATAGTTACGAAGAAGAATTGGCGAATTATCTATATGAAAACCTTCGTGCAGTTCCTAACATTCGGTTATATGGCCCAGCGCAATTTAGACTTTAGTGTATTT
ATAAATTATTTAATTAAGCAACGGTTTCATGGACTACATTTTTTCTACGTAATTATCGATGTATACATCGTTGACACTTACCTGCCT
Protein sequenceShow/hide protein sequence
MLQMCGPTGIGFLYGKIDLLFAMPPFLGIWWRFLDYSTFAQPRSRFEAGTPAIGEAIGLGAAIDYLSRVEMQKIHSYEEELANYLYENLRAVPNIRLYGPAQFRL