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Cmc04g0109681 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0109681
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionlysine--tRNA ligase-like
Genome locationCMiso1.1chr04:29048066..29053259
RNA-Seq ExpressionCmc04g0109681
SyntenyCmc04g0109681
Gene Ontology termsGO:0016874 - ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK21738.1 lysine--tRNA ligase [Cucumis melo var. makuwa]2.8e-0590.32Show/hide
Query:  HAGFTERFELFICGRELANAFSELIDRIYQR
        HAGFTERFELFICGRELANAFSEL D I QR
Subjt:  HAGFTERFELFICGRELANAFSELIDRIYQR

XP_004149642.1 lysine--tRNA ligase, chloroplastic/mitochondrial [Cucumis sativus]2.8e-0590.32Show/hide
Query:  HAGFTERFELFICGRELANAFSELIDRIYQR
        HAGFTERFELFICGRELANAFSEL D I QR
Subjt:  HAGFTERFELFICGRELANAFSELIDRIYQR

XP_008449470.1 PREDICTED: lysine--tRNA ligase-like [Cucumis melo]4.2e-3396.05Show/hide
Query:  MQNLMKPVMVFAQELGDSFYLTSQLTFFQFFHSPSHAGFTERFELFICGRELANAFSELIDRIYQRMIRKPDQATQ
        MQNLMKP+MVFAQELGDSFYLTSQLTFFQFFHSPSHAGFTERFELFICGR+LANAFSELIDRIYQRMIR+PDQATQ
Subjt:  MQNLMKPVMVFAQELGDSFYLTSQLTFFQFFHSPSHAGFTERFELFICGRELANAFSELIDRIYQRMIRKPDQATQ

XP_008449891.1 PREDICTED: lysine--tRNA ligase, chloroplastic/mitochondrial isoform X1 [Cucumis melo]2.8e-0590.32Show/hide
Query:  HAGFTERFELFICGRELANAFSELIDRIYQR
        HAGFTERFELFICGRELANAFSEL D I QR
Subjt:  HAGFTERFELFICGRELANAFSELIDRIYQR

XP_008449893.1 PREDICTED: lysine--tRNA ligase, chloroplastic/mitochondrial isoform X3 [Cucumis melo]2.8e-0590.32Show/hide
Query:  HAGFTERFELFICGRELANAFSELIDRIYQR
        HAGFTERFELFICGRELANAFSEL D I QR
Subjt:  HAGFTERFELFICGRELANAFSELIDRIYQR

TrEMBL top hitse value%identityAlignment
A0A0A0L1N3 Lysine--tRNA ligase1.4e-0590.32Show/hide
Query:  HAGFTERFELFICGRELANAFSELIDRIYQR
        HAGFTERFELFICGRELANAFSEL D I QR
Subjt:  HAGFTERFELFICGRELANAFSELIDRIYQR

A0A1S3BMQ9 lysine--tRNA ligase-like2.0e-3396.05Show/hide
Query:  MQNLMKPVMVFAQELGDSFYLTSQLTFFQFFHSPSHAGFTERFELFICGRELANAFSELIDRIYQRMIRKPDQATQ
        MQNLMKP+MVFAQELGDSFYLTSQLTFFQFFHSPSHAGFTERFELFICGR+LANAFSELIDRIYQRMIR+PDQATQ
Subjt:  MQNLMKPVMVFAQELGDSFYLTSQLTFFQFFHSPSHAGFTERFELFICGRELANAFSELIDRIYQRMIRKPDQATQ

A0A1S3BP13 Lysyl-tRNA synthetase1.4e-0590.32Show/hide
Query:  HAGFTERFELFICGRELANAFSELIDRIYQR
        HAGFTERFELFICGRELANAFSEL D I QR
Subjt:  HAGFTERFELFICGRELANAFSELIDRIYQR

A0A5A7TFD0 Lysine--tRNA ligase1.4e-0590.32Show/hide
Query:  HAGFTERFELFICGRELANAFSELIDRIYQR
        HAGFTERFELFICGRELANAFSEL D I QR
Subjt:  HAGFTERFELFICGRELANAFSELIDRIYQR

A0A5D3DE11 Lysine--tRNA ligase1.4e-0590.32Show/hide
Query:  HAGFTERFELFICGRELANAFSELIDRIYQR
        HAGFTERFELFICGRELANAFSEL D I QR
Subjt:  HAGFTERFELFICGRELANAFSELIDRIYQR

SwissProt top hitse value%identityAlignment
A2C629 Lysine--tRNA ligase8.5e-0562.5Show/hide
Query:  SHAGFTERFELFICGRELANAFSELIDRIYQRMIRKPDQA
        S  G  ERFELFI GRE ANAFSELID + QR   +  QA
Subjt:  SHAGFTERFELFICGRELANAFSELIDRIYQRMIRKPDQA

A5GI38 Lysine--tRNA ligase1.5e-0462.5Show/hide
Query:  SHAGFTERFELFICGRELANAFSELIDRIYQRMIRKPDQA
        S  G  ERFELFI GRE ANAFSELID + QR   +  QA
Subjt:  SHAGFTERFELFICGRELANAFSELIDRIYQRMIRKPDQA

Q3B0J9 Lysine--tRNA ligase6.5e-0562.5Show/hide
Query:  SHAGFTERFELFICGRELANAFSELIDRIYQRMIRKPDQA
        S  G  ERFELFI GRE ANAFSELID + QR   +  QA
Subjt:  SHAGFTERFELFICGRELANAFSELIDRIYQRMIRKPDQA

Q7U3A4 Lysine--tRNA ligase8.5e-0562.5Show/hide
Query:  SHAGFTERFELFICGRELANAFSELIDRIYQRMIRKPDQA
        S  G  ERFELFI GRE ANAFSELID + QR   +  QA
Subjt:  SHAGFTERFELFICGRELANAFSELIDRIYQRMIRKPDQA

Q9LJE2 Lysine--tRNA ligase, chloroplastic/mitochondrial2.7e-0677.42Show/hide
Query:  HAGFTERFELFICGRELANAFSELIDRIYQR
        +AG TERFELFICGRE+ANAFSEL D + QR
Subjt:  HAGFTERFELFICGRELANAFSELIDRIYQR

Arabidopsis top hitse value%identityAlignment
AT3G13490.1 Lysyl-tRNA synthetase, class II1.9e-0777.42Show/hide
Query:  HAGFTERFELFICGRELANAFSELIDRIYQR
        +AG TERFELFICGRE+ANAFSEL D + QR
Subjt:  HAGFTERFELFICGRELANAFSELIDRIYQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAACCTGATGAAGCCGGTGATGGTGTTTGCACAAGAGCTTGGAGATTCTTTTTATCTTACTTCACAATTGACGTTCTTTCAATTCTTCCACTCCCCCAGCCATGC
AGGGTTCACAGAAAGATTTGAACTTTTCATTTGTGGTCGTGAGCTGGCCAATGCATTTTCCGAATTGATCGATCGTATTTATCAAAGGATGATTAGAAAACCAGATCAGG
CAACACAATGA
mRNA sequenceShow/hide mRNA sequence
TGTAAAATCTGGTGTAGAAAATTTAACAGAGGAGTGTGTATCCACAATGGCAGCCGTTACTCGGCTTCTAATGAAGTCGATTATGGTGGCTCACTTTGGAAACTTGTTAC
ATAGCTACTGCCAAAAGCTTTAAATTGCCTTCCGGATGCACCTCAAAATCAGCTTCATTCTTTGTGTTTTCTAATTTCTAGCTCACTCAATTCAGCCATGGAAGTACGGA
GATATTCCACATTTTATAATGCAAAACCTGATGAAGCCGGTGATGGTGTTTGCACAAGAGCTTGGAGATTCTTTTTATCTTACTTCACAATTGACGTTCTTTCAATTCTT
CCACTCCCCCAGCCATGCAGGGTTCACAGAAAGATTTGAACTTTTCATTTGTGGTCGTGAGCTGGCCAATGCATTTTCCGAATTGATCGATCGTATTTATCAAAGGATGA
TTAGAAAACCAGATCAGGCAACACAATGAAAAGCATGGCTCAGCTGTTTCTGAAACAGACTCTTTGGACTTCAATTGCCAAAAAGATGAGGATGGTTCTTATGAAGTGAC
ACTTGATGATGATTTTCTTACTGCTCTGGAATATGGAATGCCACTAGCTTCTGGACTGGAATAAAGGAAAATGAAGTATAATCGAATTTGGAACCTTTGCAAGCAAGGGG
AAGTTTTCTGTTCCCTATCTCTTTTTTTTATCCTTACAATCTTGCTTAAAATGCTTTGAAGACAAGTTAAAGTTTTAAGTGGGGGGTAGGGTTGTAGCTTTGCATGTTCT
ATGTCCTTTGGGAAATTTTCATTTTGCCAAAAATGTCCAAATTTTAAACTTTTTCAATTTCTTTATTCTTAAAATAAATACCATGTCTAATTTGCTTTCTAGCTTAGACA
AGCATGTCTGCCTAACCCTTGAGCATGGAGCTCGGGTTTGTGATTGTGTTTGTCATTTGAATATTTTAAATATGTTGAAAATGCATTCTTTGATAGCTTAGAAATGTGTA
GAAGACATGCTATCCATTTTCTAAATATTTTAAATACTGTACATACTTAATAATATGTGTTGAAAACATGGCCTAACCAAAACAAGATCTGCCTAGCCCTTAGAGTCGAC
TCGGTTAGGTCAAGTAGAATACGTTAGGCTCCCTCAGTATCAGAGCTTGTGTGGGGAACTCTTCACTTTTCGCCTAACCACAACCAGACCTACATAGCCCTTAAAGTCCA
GCCGGTTAGGTCAAGTAGAATGCGTTGAGCTCCCTCAGTATCAGAGCTTGTGTGGGGAACTCTTCACTTTTGGCCTAACCAAAACCAGACCTTCCTAGCCTTCAAAACCC
AACCGGTTAGGTGAAGTAGAATGCGTTGAGTTCCCTCAGTATCAGAGCTTGTGTGGGGAACTCTTCACTTTTCGCCTAACCAAAACAAGACCTGCCTAGCCCTTAGAGTC
CAGCCGGTTAGGTCAAGTAGAATGCGTTGAGCTCCCTCAGTATCAGAGCTTGTGTGGGGAACTCTTCACTTTT
Protein sequenceShow/hide protein sequence
MQNLMKPVMVFAQELGDSFYLTSQLTFFQFFHSPSHAGFTERFELFICGRELANAFSELIDRIYQRMIRKPDQATQ