; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0109791 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0109791
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationCMiso1.1chr04:29135310..29137280
RNA-Seq ExpressionCmc04g0109791
SyntenyCmc04g0109791
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0010158 - abaxial cell fate specification (biological process)
GO:0015074 - DNA integration (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsIPR000953 - Chromo/chromo shadow domain
IPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR016197 - Chromo-like domain superfamily
IPR023780 - Chromo domain
IPR036397 - Ribonuclease H superfamily
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR041588 - Integrase zinc-binding domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059481.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]0.0e+0088.26Show/hide
Query:  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQF
        MSTIPVL LPDWSLPFMIETDASGSG+GAVLSQN HPI FFSQKLSTRAQ+KSIYERELMAVVLSVQKWRHYLLGRRFTI+SDQKALKFLLEQREVQPQF
Subjt:  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQF

Query:  QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRV---------
        QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKA+ST GIV ME+VTKEVEKDEELQL+ QQLQT+PALEGKYSL+NG LMYKGRV         
Subjt:  QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRV---------

Query:  ----------------------------LFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLS
                                    LFWKGMK DIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWT+DFIEGLPKAGGMNVIMVVVD+LS
Subjt:  ----------------------------LFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLS

Query:  KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
        KYAYFVTMKHPFSAKQV +EFIDKIVRRHGIPKSIISDRDKIF+SNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
Subjt:  KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP

Query:  WAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA
        WAELWYNTTFHSSTRTTPFQ VYGRPPPPLISYGDKKTPNDEVET+LKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA
Subjt:  WAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA

Query:  KKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPNSE
        +KRAEKLAPKYYGPY ITETIGEVAYRLD PPEASIHNVFHISQLKLKLG QH +Q QQP+LTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLP+SE
Subjt:  KKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPNSE

Query:  ATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN
        ATWESVYSMNQQFPSFHLEDKVILEP+GIVRPPIIN YKR+GKKG   DS EER+N
Subjt:  ATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN

TYK03842.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]0.0e+0088.41Show/hide
Query:  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQF
        MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQN HPI FFSQKLSTRAQ+KSIYERELMAVVLSVQKWRHYLLGRRFTI+SDQKALKFLLEQREVQPQF
Subjt:  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQF

Query:  QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRV---------
        QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKA+ST GIV ME+VTKEVEKDEELQL+ QQLQT+PALEGKYSL+N  LMYKGRV         
Subjt:  QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRV---------

Query:  ----------------------------LFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLS
                                    LFWKGMK DIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWT+DFIEGLPKAGGMNVIMVVVD+LS
Subjt:  ----------------------------LFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLS

Query:  KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
        KYAYFVTMKHPFSAKQVA+EFIDKIVRRHGIPKSIISDRDKIF+SNFWKELFYAMDTILKRSTAFHPQTDGQTER+NQCLETYLRCFCNEQPNKWHQFIP
Subjt:  KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP

Query:  WAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA
        WAELWYNTTFHSSTRTTPFQ VYGRPPPPLISYGDKKTPNDEVET+LKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA
Subjt:  WAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA

Query:  KKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPNSE
        +KRAEKLAPKYYGPY ITETIGEVAYRLD PPEASIHNVFHISQLKLKLG QH +Q QQP+LTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLP+SE
Subjt:  KKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPNSE

Query:  ATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN
        ATWESVYSMNQQFPSFHLEDKVILEP+GIVRPPIIN YKR+GKKG   DS EER+N
Subjt:  ATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN

TYK21035.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]0.0e+0088.26Show/hide
Query:  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQF
        MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQN HPI FFSQKLSTRAQ+KSIYERELMAVVLSVQKWRHYLLGRRFTI+SDQKALKFLLEQREVQPQF
Subjt:  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQF

Query:  QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRV---------
        QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKA+ST GIV ME+VTKEVEKDEELQL+ QQLQ +PALEGKYSL+NG LMYKGRV         
Subjt:  QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRV---------

Query:  ----------------------------LFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLS
                                    LFWKGMK DIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWT+DFIEGLPKAGGMNVIMVVVD+LS
Subjt:  ----------------------------LFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLS

Query:  KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
        KYAYFVTMKHPFSAKQVA+EFIDKIVRRHGIPKSIISDRDKIF+SNFWKELFYAM+TILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
Subjt:  KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP

Query:  WAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA
        WAELWYNTTFHSSTRTTPFQ VYGRPPPPLISYGDKKTPNDEVE +LKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA
Subjt:  WAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA

Query:  KKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPNSE
        +KRAEKLAPKYYGPY ITETIGEVAYRLD PPEASIHNVFHISQLKLKLG QH +Q QQP+LTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLP+SE
Subjt:  KKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPNSE

Query:  ATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN
        ATWESVYSMNQQFPSFHLEDKVILEP+GIVRPPIIN YKR+GKKG   DS EER+N
Subjt:  ATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN

TYK27058.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]0.0e+0088.26Show/hide
Query:  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQF
        MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQN HPI FFSQKLSTRAQ+KSIYERELMAVVLSVQKWRHYLLGRRFTI+SDQKALKFLLEQREVQPQF
Subjt:  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQF

Query:  QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRV---------
        QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKA+ST GIV ME+VTKEVEKDEELQL+ QQLQ +PALEGKYSL+NG LMYKGRV         
Subjt:  QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRV---------

Query:  ----------------------------LFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLS
                                    LFWKGMK DIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWT+DFIEGLPKAGGMNVIMVVVD+LS
Subjt:  ----------------------------LFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLS

Query:  KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
        KYAYFVTMKHPFSAKQVA+EFIDKIVRRHGIPKSIISDRDKIF+SNFWKELFYAM+TILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
Subjt:  KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP

Query:  WAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA
        WAELWYNTTFHSSTRTTPFQ VYGRPPPPLISYGDKKTPNDEVE +LKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA
Subjt:  WAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA

Query:  KKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPNSE
        +KRAEKLAPKYYGPY ITETIGEVAYRLD PPEASIHNVFHISQLKLKLG QH +Q QQP+LTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLP+SE
Subjt:  KKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPNSE

Query:  ATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN
        ATWESVYSMNQQFPSFHLEDKVILEP+GIVRPPIIN YKR+GKKG   DS EER+N
Subjt:  ATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN

TYK27963.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]0.0e+0088.26Show/hide
Query:  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQF
        MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQN HPI FFSQKLSTRAQ+KSIYERELMAVVLSVQKWRHYLLGRRFTI+SDQKALKFLLEQREVQPQF
Subjt:  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQF

Query:  QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRV---------
        QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKA+ST GIV ME+VTKEVEKDEELQL+ QQLQ +PALEGKYSL+NG LMYKGRV         
Subjt:  QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRV---------

Query:  ----------------------------LFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLS
                                    LFWKGMK DIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWT+DFIEGLPKAGGMNVIMVVVD+LS
Subjt:  ----------------------------LFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLS

Query:  KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
        KYAYFVTMKHPFSAKQVA+EFIDKIVRRHGIPKSIISDRDKIF+SNFWKELFYAM+TILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
Subjt:  KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP

Query:  WAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA
        WAELWYNTTFHSSTRTTPFQ VYGRPPPPLISYGDKKTPNDEVE +LKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA
Subjt:  WAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA

Query:  KKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPNSE
        +KRAEKLAPKYYGPY ITETIGEVAYRLD PPEASIHNVFHISQLKLKLG QH +Q QQP+LTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLP+SE
Subjt:  KKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPNSE

Query:  ATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN
        ATWESVYSMNQQFPSFHLEDKVILEP+GIVRPPIIN YKR+GKKG   DS EER+N
Subjt:  ATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN

TrEMBL top hitse value%identityAlignment
A0A5A7V194 Ty3/gypsy retrotransposon protein0.0e+0088.26Show/hide
Query:  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQF
        MSTIPVL LPDWSLPFMIETDASGSG+GAVLSQN HPI FFSQKLSTRAQ+KSIYERELMAVVLSVQKWRHYLLGRRFTI+SDQKALKFLLEQREVQPQF
Subjt:  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQF

Query:  QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRV---------
        QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKA+ST GIV ME+VTKEVEKDEELQL+ QQLQT+PALEGKYSL+NG LMYKGRV         
Subjt:  QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRV---------

Query:  ----------------------------LFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLS
                                    LFWKGMK DIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWT+DFIEGLPKAGGMNVIMVVVD+LS
Subjt:  ----------------------------LFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLS

Query:  KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
        KYAYFVTMKHPFSAKQV +EFIDKIVRRHGIPKSIISDRDKIF+SNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
Subjt:  KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP

Query:  WAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA
        WAELWYNTTFHSSTRTTPFQ VYGRPPPPLISYGDKKTPNDEVET+LKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA
Subjt:  WAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA

Query:  KKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPNSE
        +KRAEKLAPKYYGPY ITETIGEVAYRLD PPEASIHNVFHISQLKLKLG QH +Q QQP+LTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLP+SE
Subjt:  KKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPNSE

Query:  ATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN
        ATWESVYSMNQQFPSFHLEDKVILEP+GIVRPPIIN YKR+GKKG   DS EER+N
Subjt:  ATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN

A0A5D3BYA1 Ty3/gypsy retrotransposon protein0.0e+0088.41Show/hide
Query:  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQF
        MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQN HPI FFSQKLSTRAQ+KSIYERELMAVVLSVQKWRHYLLGRRFTI+SDQKALKFLLEQREVQPQF
Subjt:  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQF

Query:  QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRV---------
        QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKA+ST GIV ME+VTKEVEKDEELQL+ QQLQT+PALEGKYSL+N  LMYKGRV         
Subjt:  QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRV---------

Query:  ----------------------------LFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLS
                                    LFWKGMK DIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWT+DFIEGLPKAGGMNVIMVVVD+LS
Subjt:  ----------------------------LFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLS

Query:  KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
        KYAYFVTMKHPFSAKQVA+EFIDKIVRRHGIPKSIISDRDKIF+SNFWKELFYAMDTILKRSTAFHPQTDGQTER+NQCLETYLRCFCNEQPNKWHQFIP
Subjt:  KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP

Query:  WAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA
        WAELWYNTTFHSSTRTTPFQ VYGRPPPPLISYGDKKTPNDEVET+LKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA
Subjt:  WAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA

Query:  KKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPNSE
        +KRAEKLAPKYYGPY ITETIGEVAYRLD PPEASIHNVFHISQLKLKLG QH +Q QQP+LTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLP+SE
Subjt:  KKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPNSE

Query:  ATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN
        ATWESVYSMNQQFPSFHLEDKVILEP+GIVRPPIIN YKR+GKKG   DS EER+N
Subjt:  ATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN

A0A5D3DU86 Ty3/gypsy retrotransposon protein0.0e+0088.26Show/hide
Query:  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQF
        MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQN HPI FFSQKLSTRAQ+KSIYERELMAVVLSVQKWRHYLLGRRFTI+SDQKALKFLLEQREVQPQF
Subjt:  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQF

Query:  QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRV---------
        QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKA+ST GIV ME+VTKEVEKDEELQL+ QQLQ +PALEGKYSL+NG LMYKGRV         
Subjt:  QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRV---------

Query:  ----------------------------LFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLS
                                    LFWKGMK DIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWT+DFIEGLPKAGGMNVIMVVVD+LS
Subjt:  ----------------------------LFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLS

Query:  KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
        KYAYFVTMKHPFSAKQVA+EFIDKIVRRHGIPKSIISDRDKIF+SNFWKELFYAM+TILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
Subjt:  KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP

Query:  WAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA
        WAELWYNTTFHSSTRTTPFQ VYGRPPPPLISYGDKKTPNDEVE +LKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA
Subjt:  WAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA

Query:  KKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPNSE
        +KRAEKLAPKYYGPY ITETIGEVAYRLD PPEASIHNVFHISQLKLKLG QH +Q QQP+LTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLP+SE
Subjt:  KKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPNSE

Query:  ATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN
        ATWESVYSMNQQFPSFHLEDKVILEP+GIVRPPIIN YKR+GKKG   DS EER+N
Subjt:  ATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN

A0A5D3DWA9 Ty3/gypsy retrotransposon protein0.0e+0088.26Show/hide
Query:  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQF
        MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQN HPI FFSQKLSTRAQ+KSIYERELMAVVLSVQKWRHYLLGRRFTI+SDQKALKFLLEQREVQPQF
Subjt:  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQF

Query:  QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRV---------
        QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKA+ST GIV ME+VTKEVEKDEELQL+ QQLQ +PALEGKYSL+NG LMYKGRV         
Subjt:  QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRV---------

Query:  ----------------------------LFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLS
                                    LFWKGMK DIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWT+DFIEGLPKAGGMNVIMVVVD+LS
Subjt:  ----------------------------LFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLS

Query:  KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
        KYAYFVTMKHPFSAKQVA+EFIDKIVRRHGIPKSIISDRDKIF+SNFWKELFYAM+TILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
Subjt:  KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP

Query:  WAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA
        WAELWYNTTFHSSTRTTPFQ VYGRPPPPLISYGDKKTPNDEVE +LKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA
Subjt:  WAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA

Query:  KKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPNSE
        +KRAEKLAPKYYGPY ITETIGEVAYRLD PPEASIHNVFHISQLKLKLG QH +Q QQP+LTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLP+SE
Subjt:  KKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPNSE

Query:  ATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN
        ATWESVYSMNQQFPSFHLEDKVILEP+GIVRPPIIN YKR+GKKG   DS EER+N
Subjt:  ATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN

A0A5D3E325 Ty3/gypsy retrotransposon protein0.0e+0088.26Show/hide
Query:  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQF
        MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQN HPI FFSQKLSTRAQ+KSIYERELMAVVLSVQKWRHYLLGRRFTI+SDQKALKFLLEQREVQPQF
Subjt:  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQF

Query:  QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRV---------
        QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKA+ST GIV ME+VTKEVEKDEELQL+ QQLQ +PALEGKYSL+NG LMYKGRV         
Subjt:  QKWLTKLLGYDFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRV---------

Query:  ----------------------------LFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLS
                                    LFWKGMK DIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWT+DFIEGLPKAGGMNVIMVVVD+LS
Subjt:  ----------------------------LFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLS

Query:  KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
        KYAYFVTMKHPFSAKQVA+EFIDKIVRRHGIPKSIISDRDKIF+SNFWKELFYAM+TILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP
Subjt:  KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIP

Query:  WAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA
        WAELWYNTTFHSSTRTTPFQ VYGRPPPPLISYGDKKTPNDEVE +LKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA
Subjt:  WAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRPYRQRSLA

Query:  KKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPNSE
        +KRAEKLAPKYYGPY ITETIGEVAYRLD PPEASIHNVFHISQLKLKLG QH +Q QQP+LTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLP+SE
Subjt:  KKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPNSE

Query:  ATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN
        ATWESVYSMNQQFPSFHLEDKVILEP+GIVRPPIIN YKR+GKKG   DS EER+N
Subjt:  ATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein3.5e-7232.98Show/hide
Query:  PVLALPDWSLPFMIETDASGSGLGAVLSQNG-----HPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLG--RRFTIISDQKAL--KFLLEQRE
        PVL   D+S   ++ETDAS   +GAVLSQ       +P+ ++S K+S    + S+ ++E++A++ S++ WRHYL      F I++D + L  +   E   
Subjt:  PVLALPDWSLPFMIETDASGSGLGAVLSQNG-----HPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLG--RRFTIISDQKAL--KFLLEQRE

Query:  VQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRM------------DHSIE-LKAMSTAGIVGMEIVT----------------KEVEKDEELQ----
           +  +W   L  ++FEI Y+PG  N  ADALSR+            D+SI  +  +S       ++VT                K VE++ +L+    
Subjt:  VQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRM------------DHSIE-LKAMSTAGIVGMEIVT----------------KEVEKDEELQ----

Query:  -------LITQQLQTDPALEGKYSLSNGKLMYKG---------RVLFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGL
               L+    Q    +  KY    GKL++ G         R   WKG++  I++YV+ C  CQ NKS   KP G LQP+P  +R  E  ++DFI  L
Subjt:  -------LITQQLQTDPALEGKYSLSNGKLMYKG---------RVLFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGL

Query:  PKAGGMNVIMVVVDQLSKYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETY
        P++ G N + VVVD+ SK A  V      +A+Q A  F  +++   G PK II+D D IF S  WK+  +  + ++K S  + PQTDGQTER NQ +E  
Subjt:  PKAGGMNVIMVVVDQLSKYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETY

Query:  LRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPFQAVY----GRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRREL
        LRC C+  PN W   I   +  YN   HS+T+ TPF+ V+       P  L S+ DK   N +      E       +KE+L     +MKK+ D K +E+
Subjt:  LRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPFQAVY----GRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRREL

Query:  -KFKVGDEVYLKLRPYRQRSLAKKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEAS--IHNVFHISQLK
         +F+ GD V +K    R ++    ++ KLAP + GP+ + +  G   Y LD P        + FH+S L+
Subjt:  -KFKVGDEVYLKLRPYRQRSLAKKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEAS--IHNVFHISQLK

P0CT35 Transposon Tf2-2 polyprotein3.5e-7232.98Show/hide
Query:  PVLALPDWSLPFMIETDASGSGLGAVLSQNG-----HPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLG--RRFTIISDQKAL--KFLLEQRE
        PVL   D+S   ++ETDAS   +GAVLSQ       +P+ ++S K+S    + S+ ++E++A++ S++ WRHYL      F I++D + L  +   E   
Subjt:  PVLALPDWSLPFMIETDASGSGLGAVLSQNG-----HPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLG--RRFTIISDQKAL--KFLLEQRE

Query:  VQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRM------------DHSIE-LKAMSTAGIVGMEIVT----------------KEVEKDEELQ----
           +  +W   L  ++FEI Y+PG  N  ADALSR+            D+SI  +  +S       ++VT                K VE++ +L+    
Subjt:  VQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRM------------DHSIE-LKAMSTAGIVGMEIVT----------------KEVEKDEELQ----

Query:  -------LITQQLQTDPALEGKYSLSNGKLMYKG---------RVLFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGL
               L+    Q    +  KY    GKL++ G         R   WKG++  I++YV+ C  CQ NKS   KP G LQP+P  +R  E  ++DFI  L
Subjt:  -------LITQQLQTDPALEGKYSLSNGKLMYKG---------RVLFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGL

Query:  PKAGGMNVIMVVVDQLSKYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETY
        P++ G N + VVVD+ SK A  V      +A+Q A  F  +++   G PK II+D D IF S  WK+  +  + ++K S  + PQTDGQTER NQ +E  
Subjt:  PKAGGMNVIMVVVDQLSKYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETY

Query:  LRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPFQAVY----GRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRREL
        LRC C+  PN W   I   +  YN   HS+T+ TPF+ V+       P  L S+ DK   N +      E       +KE+L     +MKK+ D K +E+
Subjt:  LRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPFQAVY----GRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRREL

Query:  -KFKVGDEVYLKLRPYRQRSLAKKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEAS--IHNVFHISQLK
         +F+ GD V +K    R ++    ++ KLAP + GP+ + +  G   Y LD P        + FH+S L+
Subjt:  -KFKVGDEVYLKLRPYRQRSLAKKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEAS--IHNVFHISQLK

P0CT36 Transposon Tf2-3 polyprotein3.5e-7232.98Show/hide
Query:  PVLALPDWSLPFMIETDASGSGLGAVLSQNG-----HPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLG--RRFTIISDQKAL--KFLLEQRE
        PVL   D+S   ++ETDAS   +GAVLSQ       +P+ ++S K+S    + S+ ++E++A++ S++ WRHYL      F I++D + L  +   E   
Subjt:  PVLALPDWSLPFMIETDASGSGLGAVLSQNG-----HPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLG--RRFTIISDQKAL--KFLLEQRE

Query:  VQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRM------------DHSIE-LKAMSTAGIVGMEIVT----------------KEVEKDEELQ----
           +  +W   L  ++FEI Y+PG  N  ADALSR+            D+SI  +  +S       ++VT                K VE++ +L+    
Subjt:  VQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRM------------DHSIE-LKAMSTAGIVGMEIVT----------------KEVEKDEELQ----

Query:  -------LITQQLQTDPALEGKYSLSNGKLMYKG---------RVLFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGL
               L+    Q    +  KY    GKL++ G         R   WKG++  I++YV+ C  CQ NKS   KP G LQP+P  +R  E  ++DFI  L
Subjt:  -------LITQQLQTDPALEGKYSLSNGKLMYKG---------RVLFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGL

Query:  PKAGGMNVIMVVVDQLSKYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETY
        P++ G N + VVVD+ SK A  V      +A+Q A  F  +++   G PK II+D D IF S  WK+  +  + ++K S  + PQTDGQTER NQ +E  
Subjt:  PKAGGMNVIMVVVDQLSKYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETY

Query:  LRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPFQAVY----GRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRREL
        LRC C+  PN W   I   +  YN   HS+T+ TPF+ V+       P  L S+ DK   N +      E       +KE+L     +MKK+ D K +E+
Subjt:  LRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPFQAVY----GRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRREL

Query:  -KFKVGDEVYLKLRPYRQRSLAKKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEAS--IHNVFHISQLK
         +F+ GD V +K    R ++    ++ KLAP + GP+ + +  G   Y LD P        + FH+S L+
Subjt:  -KFKVGDEVYLKLRPYRQRSLAKKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEAS--IHNVFHISQLK

P0CT41 Transposon Tf2-12 polyprotein3.5e-7232.98Show/hide
Query:  PVLALPDWSLPFMIETDASGSGLGAVLSQNG-----HPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLG--RRFTIISDQKAL--KFLLEQRE
        PVL   D+S   ++ETDAS   +GAVLSQ       +P+ ++S K+S    + S+ ++E++A++ S++ WRHYL      F I++D + L  +   E   
Subjt:  PVLALPDWSLPFMIETDASGSGLGAVLSQNG-----HPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLG--RRFTIISDQKAL--KFLLEQRE

Query:  VQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRM------------DHSIE-LKAMSTAGIVGMEIVT----------------KEVEKDEELQ----
           +  +W   L  ++FEI Y+PG  N  ADALSR+            D+SI  +  +S       ++VT                K VE++ +L+    
Subjt:  VQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRM------------DHSIE-LKAMSTAGIVGMEIVT----------------KEVEKDEELQ----

Query:  -------LITQQLQTDPALEGKYSLSNGKLMYKG---------RVLFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGL
               L+    Q    +  KY    GKL++ G         R   WKG++  I++YV+ C  CQ NKS   KP G LQP+P  +R  E  ++DFI  L
Subjt:  -------LITQQLQTDPALEGKYSLSNGKLMYKG---------RVLFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGL

Query:  PKAGGMNVIMVVVDQLSKYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETY
        P++ G N + VVVD+ SK A  V      +A+Q A  F  +++   G PK II+D D IF S  WK+  +  + ++K S  + PQTDGQTER NQ +E  
Subjt:  PKAGGMNVIMVVVDQLSKYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETY

Query:  LRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPFQAVY----GRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRREL
        LRC C+  PN W   I   +  YN   HS+T+ TPF+ V+       P  L S+ DK   N +      E       +KE+L     +MKK+ D K +E+
Subjt:  LRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPFQAVY----GRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRREL

Query:  -KFKVGDEVYLKLRPYRQRSLAKKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEAS--IHNVFHISQLK
         +F+ GD V +K    R ++    ++ KLAP + GP+ + +  G   Y LD P        + FH+S L+
Subjt:  -KFKVGDEVYLKLRPYRQRSLAKKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEAS--IHNVFHISQLK

Q9UR07 Transposon Tf2-11 polyprotein3.5e-7232.98Show/hide
Query:  PVLALPDWSLPFMIETDASGSGLGAVLSQNG-----HPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLG--RRFTIISDQKAL--KFLLEQRE
        PVL   D+S   ++ETDAS   +GAVLSQ       +P+ ++S K+S    + S+ ++E++A++ S++ WRHYL      F I++D + L  +   E   
Subjt:  PVLALPDWSLPFMIETDASGSGLGAVLSQNG-----HPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLG--RRFTIISDQKAL--KFLLEQRE

Query:  VQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRM------------DHSIE-LKAMSTAGIVGMEIVT----------------KEVEKDEELQ----
           +  +W   L  ++FEI Y+PG  N  ADALSR+            D+SI  +  +S       ++VT                K VE++ +L+    
Subjt:  VQPQFQKWLTKLLGYDFEILYQPGLQNKAADALSRM------------DHSIE-LKAMSTAGIVGMEIVT----------------KEVEKDEELQ----

Query:  -------LITQQLQTDPALEGKYSLSNGKLMYKG---------RVLFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGL
               L+    Q    +  KY    GKL++ G         R   WKG++  I++YV+ C  CQ NKS   KP G LQP+P  +R  E  ++DFI  L
Subjt:  -------LITQQLQTDPALEGKYSLSNGKLMYKG---------RVLFWKGMKADIKKYVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTLDFIEGL

Query:  PKAGGMNVIMVVVDQLSKYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETY
        P++ G N + VVVD+ SK A  V      +A+Q A  F  +++   G PK II+D D IF S  WK+  +  + ++K S  + PQTDGQTER NQ +E  
Subjt:  PKAGGMNVIMVVVDQLSKYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHPQTDGQTERVNQCLETY

Query:  LRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPFQAVY----GRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRREL
        LRC C+  PN W   I   +  YN   HS+T+ TPF+ V+       P  L S+ DK   N +      E       +KE+L     +MKK+ D K +E+
Subjt:  LRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPFQAVY----GRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRREL

Query:  -KFKVGDEVYLKLRPYRQRSLAKKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEAS--IHNVFHISQLK
         +F+ GD V +K    R ++    ++ KLAP + GP+ + +  G   Y LD P        + FH+S L+
Subjt:  -KFKVGDEVYLKLRPYRQRSLAKKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEAS--IHNVFHISQLK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACCATACCCGTACTCGCACTACCCGATTGGTCTTTGCCTTTTATGATAGAAACTGATGCCTCAGGCAGTGGATTGGGAGCAGTACTGTCTCAGAACGGCCATCC
CATCACATTCTTCAGCCAGAAGTTGTCTACAAGGGCCCAATCCAAGTCCATCTACGAGAGAGAATTGATGGCTGTAGTACTATCAGTGCAGAAGTGGCGGCATTATCTCT
TAGGAAGGAGGTTCACCATTATATCGGACCAAAAAGCTCTAAAGTTTTTATTGGAGCAGAGAGAGGTGCAACCACAGTTCCAAAAGTGGTTAACCAAGCTGTTGGGATAT
GACTTTGAAATTTTATATCAACCGGGACTCCAAAATAAAGCAGCTGATGCACTTTCAAGAATGGATCACTCGATAGAATTGAAGGCAATGTCAACGGCAGGCATTGTAGG
CATGGAAATAGTTACAAAGGAAGTCGAGAAGGATGAAGAACTTCAACTCATAACACAACAGTTGCAGACTGACCCGGCACTAGAGGGAAAATATTCCTTGTCGAATGGCA
AGCTAATGTATAAAGGAAGAGTGCTGTTTTGGAAAGGTATGAAGGCAGATATTAAGAAGTATGTTGAACAGTGTGAAATCTGCCAAAGAAATAAGAGTGAAGCAACCAAA
CCGGCAGGGGTTCTTCAACCATTACCCATACCCGACCGCATATTGGAAGATTGGACTCTGGACTTCATCGAAGGGTTGCCTAAAGCAGGAGGTATGAATGTGATTATGGT
GGTGGTTGACCAGCTGAGCAAATATGCTTACTTTGTCACCATGAAGCACCCGTTCTCAGCAAAGCAGGTAGCCATCGAATTCATTGATAAGATAGTTCGGAGACATGGCA
TTCCTAAGTCAATCATATCAGACAGAGATAAAATCTTTTTAAGCAACTTTTGGAAGGAATTATTCTATGCCATGGATACCATCCTTAAACGAAGCACCGCTTTTCATCCC
CAAACCGACGGCCAGACAGAACGGGTCAATCAGTGTTTAGAAACCTACTTAAGATGTTTTTGTAATGAGCAACCGAACAAATGGCATCAGTTCATACCATGGGCAGAGTT
ATGGTACAATACCACCTTCCATTCTTCAACACGCACGACCCCCTTCCAAGCTGTGTATGGTAGACCCCCACCACCCTTGATATCCTATGGAGATAAGAAGACACCTAATG
ATGAAGTTGAAACAATGCTGAAAGAGAGAGACTTGGCTATTAGCGCGCTCAAGGAAAACCTCACTATTGCTCAAAACAGAATGAAGAAATTTGCTGATTCAAAGAGGAGA
GAACTTAAGTTTAAGGTGGGAGATGAAGTCTATCTCAAGCTGAGGCCCTACCGTCAGCGTTCTTTAGCAAAGAAAAGGGCCGAAAAACTAGCTCCTAAGTACTATGGCCC
ATATTGCATCACTGAGACCATAGGGGAGGTGGCCTATCGACTTGATCCGCCTCCAGAAGCTTCAATTCACAATGTTTTCCACATTTCGCAGCTCAAACTTAAACTAGGCA
AACAGCACACAATCCAAGCCCAACAACCAAAGCTCACAGCAGAATTTGAATTGCAACTTTGGCCGGAGACAGTCTTAGGCATCCGTTGGAGTCCTGAATTGGGAGCAAAT
GAATGGCTGGTGAAATGGAAAGGATTACCCAACAGTGAAGCCACCTGGGAATCCGTTTACTCAATGAACCAACAGTTTCCCTCATTCCACCTTGAGGACAAGGTGATTTT
GGAACCCCAGGGTATTGTAAGACCTCCTATTATTAATGATTATAAGAGGAAGGGCAAGAAAGGAATTACACAAGACAGCATGGAGGAAAGAAAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACCATACCCGTACTCGCACTACCCGATTGGTCTTTGCCTTTTATGATAGAAACTGATGCCTCAGGCAGTGGATTGGGAGCAGTACTGTCTCAGAACGGCCATCC
CATCACATTCTTCAGCCAGAAGTTGTCTACAAGGGCCCAATCCAAGTCCATCTACGAGAGAGAATTGATGGCTGTAGTACTATCAGTGCAGAAGTGGCGGCATTATCTCT
TAGGAAGGAGGTTCACCATTATATCGGACCAAAAAGCTCTAAAGTTTTTATTGGAGCAGAGAGAGGTGCAACCACAGTTCCAAAAGTGGTTAACCAAGCTGTTGGGATAT
GACTTTGAAATTTTATATCAACCGGGACTCCAAAATAAAGCAGCTGATGCACTTTCAAGAATGGATCACTCGATAGAATTGAAGGCAATGTCAACGGCAGGCATTGTAGG
CATGGAAATAGTTACAAAGGAAGTCGAGAAGGATGAAGAACTTCAACTCATAACACAACAGTTGCAGACTGACCCGGCACTAGAGGGAAAATATTCCTTGTCGAATGGCA
AGCTAATGTATAAAGGAAGAGTGCTGTTTTGGAAAGGTATGAAGGCAGATATTAAGAAGTATGTTGAACAGTGTGAAATCTGCCAAAGAAATAAGAGTGAAGCAACCAAA
CCGGCAGGGGTTCTTCAACCATTACCCATACCCGACCGCATATTGGAAGATTGGACTCTGGACTTCATCGAAGGGTTGCCTAAAGCAGGAGGTATGAATGTGATTATGGT
GGTGGTTGACCAGCTGAGCAAATATGCTTACTTTGTCACCATGAAGCACCCGTTCTCAGCAAAGCAGGTAGCCATCGAATTCATTGATAAGATAGTTCGGAGACATGGCA
TTCCTAAGTCAATCATATCAGACAGAGATAAAATCTTTTTAAGCAACTTTTGGAAGGAATTATTCTATGCCATGGATACCATCCTTAAACGAAGCACCGCTTTTCATCCC
CAAACCGACGGCCAGACAGAACGGGTCAATCAGTGTTTAGAAACCTACTTAAGATGTTTTTGTAATGAGCAACCGAACAAATGGCATCAGTTCATACCATGGGCAGAGTT
ATGGTACAATACCACCTTCCATTCTTCAACACGCACGACCCCCTTCCAAGCTGTGTATGGTAGACCCCCACCACCCTTGATATCCTATGGAGATAAGAAGACACCTAATG
ATGAAGTTGAAACAATGCTGAAAGAGAGAGACTTGGCTATTAGCGCGCTCAAGGAAAACCTCACTATTGCTCAAAACAGAATGAAGAAATTTGCTGATTCAAAGAGGAGA
GAACTTAAGTTTAAGGTGGGAGATGAAGTCTATCTCAAGCTGAGGCCCTACCGTCAGCGTTCTTTAGCAAAGAAAAGGGCCGAAAAACTAGCTCCTAAGTACTATGGCCC
ATATTGCATCACTGAGACCATAGGGGAGGTGGCCTATCGACTTGATCCGCCTCCAGAAGCTTCAATTCACAATGTTTTCCACATTTCGCAGCTCAAACTTAAACTAGGCA
AACAGCACACAATCCAAGCCCAACAACCAAAGCTCACAGCAGAATTTGAATTGCAACTTTGGCCGGAGACAGTCTTAGGCATCCGTTGGAGTCCTGAATTGGGAGCAAAT
GAATGGCTGGTGAAATGGAAAGGATTACCCAACAGTGAAGCCACCTGGGAATCCGTTTACTCAATGAACCAACAGTTTCCCTCATTCCACCTTGAGGACAAGGTGATTTT
GGAACCCCAGGGTATTGTAAGACCTCCTATTATTAATGATTATAAGAGGAAGGGCAAGAAAGGAATTACACAAGACAGCATGGAGGAAAGAAAGAATTGA
Protein sequenceShow/hide protein sequence
MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNGHPITFFSQKLSTRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGY
DFEILYQPGLQNKAADALSRMDHSIELKAMSTAGIVGMEIVTKEVEKDEELQLITQQLQTDPALEGKYSLSNGKLMYKGRVLFWKGMKADIKKYVEQCEICQRNKSEATK
PAGVLQPLPIPDRILEDWTLDFIEGLPKAGGMNVIMVVVDQLSKYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILKRSTAFHP
QTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPFQAVYGRPPPPLISYGDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKRR
ELKFKVGDEVYLKLRPYRQRSLAKKRAEKLAPKYYGPYCITETIGEVAYRLDPPPEASIHNVFHISQLKLKLGKQHTIQAQQPKLTAEFELQLWPETVLGIRWSPELGAN
EWLVKWKGLPNSEATWESVYSMNQQFPSFHLEDKVILEPQGIVRPPIINDYKRKGKKGITQDSMEERKN