; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0110031 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0110031
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr04:29342372..29343142
RNA-Seq ExpressionCmc04g0110031
SyntenyCmc04g0110031
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN74303.1 hypothetical protein VITISV_032980 [Vitis vinifera]4.0e-8877.99Show/hide
Query:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK
        KWVYKTKLKENGEVDKY+  LVAKGYK EF VDYKEVFAPVARHDTI LV++LAA+NSWPIFQLDV S FLHG L+E+VFVDQPPGY+KVK+EHKVYRLK
Subjt:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK

Query:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIF
        KALYGLKQAPRAWYSRI+AYF KE F+KCPYEHTLF K+ +G K+LIVCLYVDD+IFTGNDS M E+FK+SMMVEFEMSDL          VVQS +GIF
Subjt:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIF

Query:  ISQKKYMHK
        ISQKKY+ +
Subjt:  ISQKKYMHK

KZV47100.1 retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Dorcoceras hygrometricum]2.8e-8976.56Show/hide
Query:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK
        KW+YKTK+KENGEVDK++  LVAKGYK E+ VDYKEVFAPVARHDTI LV++LAA+ SWPIFQLDVKS FLHG+L+E+V++DQPPGY+K+ +EHKVY+LK
Subjt:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK

Query:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIF
        KALYGLKQAPRAWYSRI+ YF K  FKKCPYEHTLFTK  D  K+LIVCLYVDDL FTGND +M E FK SMMVEF+MSDL KMHYFL IEVVQS  GIF
Subjt:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIF

Query:  ISQKKYMHK
        ISQKKY+ +
Subjt:  ISQKKYMHK

RVW80685.1 Retrovirus-related Pol polyprotein from transposon RE2 [Vitis vinifera]9.9e-8774.42Show/hide
Query:  SQDNWGKWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEH
        +Q+N  K   + K++ENGEVDKY+ CLVAKGYK E  VDY EVFAPV+RHDTI LV+ LAA+NSWPIFQLDV STFLHG L+E+VFVDQPPGY+KVK+EH
Subjt:  SQDNWGKWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEH

Query:  KVYRLKKALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQ
        KVYRLKK +YGLKQAP AWYSRI+AYF KE F+KCPYEHTLF K+ +G K+LIVCLYVDDLI+TGNDS M E+F +SMMVEFEMSDL  MHYFL IEVVQ
Subjt:  KVYRLKKALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQ

Query:  SASGIFISQKKYMHK
        S +GIFISQKKY+ +
Subjt:  SASGIFISQKKYMHK

RVW92024.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]3.4e-9582.3Show/hide
Query:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK
        KWVYKTKLKENGEVDKY+  LVAKGYK EF VDYKEVFAPVARHDTI LV++LAA+NSWPIFQLDVKS FLHG L+E+VFVDQPPGY+KVK+EHKVYRLK
Subjt:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK

Query:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIF
        KALYGLKQAPRAWYSRI+AYF KE F+KCPYEHTLF K+ +G K+LIVCLYVDDLIFTGNDS M E+FK+SMMVEFEMSDL  MHYFL IEVVQS +GIF
Subjt:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIF

Query:  ISQKKYMHK
        ISQKKY+ +
Subjt:  ISQKKYMHK

RVX00732.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]1.2e-9280.86Show/hide
Query:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK
        KWVYKTKLKENGEVDKY+  LVAKGYK EF VDYKEVF+PVARHDTI LV++LAA+NSWPIFQLDV   FLHG L+E VFVDQPPGY+KVK+EHKVYRLK
Subjt:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK

Query:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIF
        KALYGLKQAPRAWYSRI+AYF KE F+KCPYEHTLF K+ +G K+LIVCLYVDDLIFTGNDS M E+FK+SMMVEFEMSDL  MHYFL IEVVQS  GIF
Subjt:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIF

Query:  ISQKKYMHK
        ISQKKY+ +
Subjt:  ISQKKYMHK

TrEMBL top hitse value%identityAlignment
A0A2Z7CJ54 Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment)1.4e-8976.56Show/hide
Query:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK
        KW+YKTK+KENGEVDK++  LVAKGYK E+ VDYKEVFAPVARHDTI LV++LAA+ SWPIFQLDVKS FLHG+L+E+V++DQPPGY+K+ +EHKVY+LK
Subjt:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK

Query:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIF
        KALYGLKQAPRAWYSRI+ YF K  FKKCPYEHTLFTK  D  K+LIVCLYVDDL FTGND +M E FK SMMVEF+MSDL KMHYFL IEVVQS  GIF
Subjt:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIF

Query:  ISQKKYMHK
        ISQKKY+ +
Subjt:  ISQKKYMHK

A0A438H868 Retrovirus-related Pol polyprotein from transposon RE24.8e-8774.42Show/hide
Query:  SQDNWGKWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEH
        +Q+N  K   + K++ENGEVDKY+ CLVAKGYK E  VDY EVFAPV+RHDTI LV+ LAA+NSWPIFQLDV STFLHG L+E+VFVDQPPGY+KVK+EH
Subjt:  SQDNWGKWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEH

Query:  KVYRLKKALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQ
        KVYRLKK +YGLKQAP AWYSRI+AYF KE F+KCPYEHTLF K+ +G K+LIVCLYVDDLI+TGNDS M E+F +SMMVEFEMSDL  MHYFL IEVVQ
Subjt:  KVYRLKKALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQ

Query:  SASGIFISQKKYMHK
        S +GIFISQKKY+ +
Subjt:  SASGIFISQKKYMHK

A0A438I5N6 Retrovirus-related Pol polyprotein from transposon TNT 1-941.7e-9582.3Show/hide
Query:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK
        KWVYKTKLKENGEVDKY+  LVAKGYK EF VDYKEVFAPVARHDTI LV++LAA+NSWPIFQLDVKS FLHG L+E+VFVDQPPGY+KVK+EHKVYRLK
Subjt:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK

Query:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIF
        KALYGLKQAPRAWYSRI+AYF KE F+KCPYEHTLF K+ +G K+LIVCLYVDDLIFTGNDS M E+FK+SMMVEFEMSDL  MHYFL IEVVQS +GIF
Subjt:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIF

Query:  ISQKKYMHK
        ISQKKY+ +
Subjt:  ISQKKYMHK

A0A438IVG3 Retrovirus-related Pol polyprotein from transposon RE15.9e-9380.86Show/hide
Query:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK
        KWVYKTKLKENGEVDKY+  LVAKGYK EF VDYKEVF+PVARHDTI LV++LAA+NSWPIFQLDV   FLHG L+E VFVDQPPGY+KVK+EHKVYRLK
Subjt:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK

Query:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIF
        KALYGLKQAPRAWYSRI+AYF KE F+KCPYEHTLF K+ +G K+LIVCLYVDDLIFTGNDS M E+FK+SMMVEFEMSDL  MHYFL IEVVQS  GIF
Subjt:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIF

Query:  ISQKKYMHK
        ISQKKY+ +
Subjt:  ISQKKYMHK

A5B902 Uncharacterized protein2.0e-8877.99Show/hide
Query:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK
        KWVYKTKLKENGEVDKY+  LVAKGYK EF VDYKEVFAPVARHDTI LV++LAA+NSWPIFQLDV S FLHG L+E+VFVDQPPGY+KVK+EHKVYRLK
Subjt:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK

Query:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIF
        KALYGLKQAPRAWYSRI+AYF KE F+KCPYEHTLF K+ +G K+LIVCLYVDD+IFTGNDS M E+FK+SMMVEFEMSDL          VVQS +GIF
Subjt:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIF

Query:  ISQKKYMHK
        ISQKKY+ +
Subjt:  ISQKKYMHK

SwissProt top hitse value%identityAlignment
P04146 Copia protein6.8e-3032.86Show/hide
Query:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK
        +WV+  K  E G   +Y+  LVA+G+  ++ +DY+E FAPVAR  +   ++SL  + +  + Q+DVK+ FL+G L+E++++  P G     D   V +L 
Subjt:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK

Query:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLF-TKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGI
        KA+YGLKQA R W+   +    +  F     +  ++    G+  + + V LYVDD++    D   +  FKR +M +F M+DL ++ +F+ I +      I
Subjt:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLF-TKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGI

Query:  FISQKKYMHK
        ++SQ  Y+ K
Subjt:  FISQKKYMHK

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.7e-3634.6Show/hide
Query:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK
        KWV+K K   + ++ +Y+  LV KG++ +  +D+ E+F+PV +  +I  ++SLAA     + QLDVK+ FLHG+L+E+++++QP G+     +H V +L 
Subjt:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK

Query:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASG--
        K+LYGLKQAPR WY + D++   + + K   +  ++ K       +I+ LYVDD++  G D  +I K K  +   F+M DL      L +++V+  +   
Subjt:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASG--

Query:  IFISQKKYMHK
        +++SQ+KY+ +
Subjt:  IFISQKKYMHK

P25600 Putative transposon Ty5-1 protein YCL074W4.7e-1532.68Show/hide
Query:  LDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLKKALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTL-FTKIGDGRKLLIVCLYVDDLIFTGNDS
        +DV + FL+  + E ++V QPPG+V  ++   V+ L   +YGLKQAP  W   I+    K  F +   EH L F    DG   + + +YVDDL+      
Subjt:  LDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLKKALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTL-FTKIGDGRKLLIVCLYVDDLIFTGNDS

Query:  AMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASG-IFISQKKYMHKRCRTS
         + ++ K+ +   + M DL K+  FL + + QS++G I +S + Y+ K    S
Subjt:  AMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASG-IFISQKKYMHKRCRTS

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.0e-3837.2Show/hide
Query:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK
        +W++  K   +G +++Y+  LVAKGY     +DY E F+PV +  +I +V+ +A   SWPI QLDV + FL G L + V++ QPPG++     + V +L+
Subjt:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK

Query:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIF
        KALYGLKQAPRAWY  +  Y     F     + +LF  +  G+ ++ + +YVDD++ TGND  ++     ++   F + D  ++HYFL IE  +  +G+ 
Subjt:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIF

Query:  ISQKKYM
        +SQ++Y+
Subjt:  ISQKKYM

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.6e-3937.86Show/hide
Query:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK
        +W++  K   +G +++Y+  LVAKGY     +DY E F+PV +  +I +V+ +A   SWPI QLDV + FL G L ++V++ QPPG+V       V RL+
Subjt:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLK

Query:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIF
        KA+YGLKQAPRAWY  +  Y     F     + +LF  +  GR ++ + +YVDD++ TGND+ +++    ++   F + +   +HYFL IE  +   G+ 
Subjt:  KALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIF

Query:  ISQKKY
        +SQ++Y
Subjt:  ISQKKY

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 82.2e-3636.19Show/hide
Query:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDE----HKV
        KWVYK K   +G +++Y+  LVAKGY  +  +D+ E F+PV +  ++ L+++++A  ++ + QLD+ + FL+G+L E++++  PPGY   + +    + V
Subjt:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDE----HKV

Query:  YRLKKALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSA
          LKK++YGLKQA R W+ +         F +   +HT F KI      L V +YVDD+I   N+ A +++ K  +   F++ DL  + YFL +E+ +SA
Subjt:  YRLKKALYGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSA

Query:  SGIFISQKKY
        +GI I Q+KY
Subjt:  SGIFISQKKY

ATMG00810.1 DNA/RNA polymerases superfamily protein1.4e-0637.7Show/hide
Query:  LIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIFISQKKY
        + + LYVDD++ TG+ + ++      +   F M DL  +HYFL I++    SG+F+SQ KY
Subjt:  LIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIFISQKKY

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)9.2e-0640.74Show/hide
Query:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLA
        KWV+KTKL  +G +D+ +  LVAKG+  E  + + E ++PV R  TI  ++++A
Subjt:  KWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACAAGACAATTGGGGTAAATGGGTGTACAAGACAAAATTGAAAGAGAATGGCGAAGTCGACAAGTACGAGACGTGTTTAGTTGCAAAGGGGTATAAGCATGAATT
TAGTGTTGACTACAAAGAAGTCTTTGCTCCAGTTGCAAGACATGATACAATCATATTAGTTGTCTCTTTGGCAGCCAAAAATTCATGGCCTATTTTCCAGTTGGATGTGA
AATCAACATTTTTACATGGTGAGCTCCAAGAAAAGGTATTTGTCGATCAACCTCCTGGTTATGTGAAGGTCAAAGATGAACACAAAGTTTATAGACTCAAAAAGGCATTA
TACGGACTAAAACAAGCTCCACGGGCATGGTATAGTCGTATAGATGCTTATTTTACTAAGGAGAGATTTAAGAAATGTCCATATGAGCATACTCTTTTTACAAAAATTGG
AGATGGAAGAAAATTACTCATTGTTTGCTTATATGTGGATGATCTTATTTTTACTGGAAACGACAGTGCCATGATTGAGAAATTTAAGAGATCTATGATGGTTGAATTTG
AAATGTCTGATCTTAGAAAAATGCATTATTTTTTGGAGATTGAAGTGGTTCAATCAGCAAGTGGAATCTTTATTTCTCAAAAAAAATATATGCACAAGAGATGTCGGACA
AGTTCCAAATGGCAAATTGCAATCCTATGGAAGTGGGTCTTAAACTTGTTCGAGATCCTGAAGGAAGGAAGATTGACAACACACTCTACAAGCAAATTGCGGGGAGTTTA
A
mRNA sequenceShow/hide mRNA sequence
ATGTCACAAGACAATTGGGGTAAATGGGTGTACAAGACAAAATTGAAAGAGAATGGCGAAGTCGACAAGTACGAGACGTGTTTAGTTGCAAAGGGGTATAAGCATGAATT
TAGTGTTGACTACAAAGAAGTCTTTGCTCCAGTTGCAAGACATGATACAATCATATTAGTTGTCTCTTTGGCAGCCAAAAATTCATGGCCTATTTTCCAGTTGGATGTGA
AATCAACATTTTTACATGGTGAGCTCCAAGAAAAGGTATTTGTCGATCAACCTCCTGGTTATGTGAAGGTCAAAGATGAACACAAAGTTTATAGACTCAAAAAGGCATTA
TACGGACTAAAACAAGCTCCACGGGCATGGTATAGTCGTATAGATGCTTATTTTACTAAGGAGAGATTTAAGAAATGTCCATATGAGCATACTCTTTTTACAAAAATTGG
AGATGGAAGAAAATTACTCATTGTTTGCTTATATGTGGATGATCTTATTTTTACTGGAAACGACAGTGCCATGATTGAGAAATTTAAGAGATCTATGATGGTTGAATTTG
AAATGTCTGATCTTAGAAAAATGCATTATTTTTTGGAGATTGAAGTGGTTCAATCAGCAAGTGGAATCTTTATTTCTCAAAAAAAATATATGCACAAGAGATGTCGGACA
AGTTCCAAATGGCAAATTGCAATCCTATGGAAGTGGGTCTTAAACTTGTTCGAGATCCTGAAGGAAGGAAGATTGACAACACACTCTACAAGCAAATTGCGGGGAGTTTA
A
Protein sequenceShow/hide protein sequence
MSQDNWGKWVYKTKLKENGEVDKYETCLVAKGYKHEFSVDYKEVFAPVARHDTIILVVSLAAKNSWPIFQLDVKSTFLHGELQEKVFVDQPPGYVKVKDEHKVYRLKKAL
YGLKQAPRAWYSRIDAYFTKERFKKCPYEHTLFTKIGDGRKLLIVCLYVDDLIFTGNDSAMIEKFKRSMMVEFEMSDLRKMHYFLEIEVVQSASGIFISQKKYMHKRCRT
SSKWQIAILWKWVLNLFEILKEGRLTTHSTSKLRGV