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Cmc04g0110121 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0110121
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Descriptionzinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationCMiso1.1chr04:29426761..29428878
RNA-Seq ExpressionCmc04g0110121
SyntenyCmc04g0110121
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152188.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Momordica charantia]3.0e-1839.43Show/hide
Query:  MNPPPAVKVEVANMDENDQNDGKKKGNIDDPYDVECEYCGALYISHLKRNRMEDMEAHTENYASG-----RPCCGGAEDGYKENLILESEEEEEEEEVES
        MN P    V   N     QND K+KG       V+C  C ALY  H KRN +E M+A+ +NY+ G        CGG              +E   E ++S
Subjt:  MNPPPAVKVEVANMDENDQNDGKKKGNIDDPYDVECEYCGALYISHLKRNRMEDMEAHTENYASG-----RPCCGGAEDGYKENLILESEEEEEEEEVES

Query:  VGENSGFFYSEVAKILMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLR
          +     + E  +IL+AKMI+I KLPL FV++EGFRRF++Q++  + P+FVIPS  T+ + ILEIY+ EK  +R
Subjt:  VGENSGFFYSEVAKILMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLR

XP_022152189.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Momordica charantia]3.0e-1839.43Show/hide
Query:  MNPPPAVKVEVANMDENDQNDGKKKGNIDDPYDVECEYCGALYISHLKRNRMEDMEAHTENYASG-----RPCCGGAEDGYKENLILESEEEEEEEEVES
        MN P    V   N     QND K+KG       V+C  C ALY  H KRN +E M+A+ +NY+ G        CGG              +E   E ++S
Subjt:  MNPPPAVKVEVANMDENDQNDGKKKGNIDDPYDVECEYCGALYISHLKRNRMEDMEAHTENYASG-----RPCCGGAEDGYKENLILESEEEEEEEEVES

Query:  VGENSGFFYSEVAKILMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLR
          +     + E  +IL+AKMI+I KLPL FV++EGFRRF++Q++  + P+FVIPS  T+ + ILEIY+ EK  +R
Subjt:  VGENSGFFYSEVAKILMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLR

XP_022152195.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Momordica charantia]3.0e-2641.97Show/hide
Query:  MNPPPAVKVEVANMDEND-------------QNDGKKKGNIDDPYDVECEYCGALYISHLKRNRM-EDMEAHTENYASGRPCCGGAEDGYKENLILESEE
        MN P   +VEV ++ E++             QN  K+KGN+D P+ VE + CGALY SH KRN+M ED+E +++ +        G  +  +E+L   SEE
Subjt:  MNPPPAVKVEVANMDEND-------------QNDGKKKGNIDDPYDVECEYCGALYISHLKRNRM-EDMEAHTENYASGRPCCGGAEDGYKENLILESEE

Query:  EEEE-----EEVESVGENS--GFFYSEVAKILMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLRKI
        E E+     +  +S   ++  G F ++ A+IL+A+MI+IDKLPL FV DEGFR F+E+ +C + P+FV+PS  T+A+ ILEIYQS K  LR++
Subjt:  EEEE-----EEVESVGENS--GFFYSEVAKILMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLRKI

XP_038888298.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Benincasa hispida]1.2e-1436.14Show/hide
Query:  KGNIDDPYDVECEYCGALYISHLKRNRMEDMEAHTEN---YASGRPCCGGAEDGYKENLILESEEEEE---------EEEVESVGENSGFFYSEVAKI--
        KG+ ++PY   C+YCGA Y  H KRN    M+ H E+   Y   R       D  ++ L  + +EE           E + E+VG+       E + +  
Subjt:  KGNIDDPYDVECEYCGALYISHLKRNRMEDMEAHTEN---YASGRPCCGGAEDGYKENLILESEEEEE---------EEEVESVGENSGFFYSEVAKI--

Query:  ---LMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLRKIF
            +A+M++++KLP KFVE +GF+RF+ +  C   P+FVIPS+ T+AK IL IY +EKQ L+ +F
Subjt:  ---LMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLRKIF

XP_038888299.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Benincasa hispida]1.2e-1436.14Show/hide
Query:  KGNIDDPYDVECEYCGALYISHLKRNRMEDMEAHTEN---YASGRPCCGGAEDGYKENLILESEEEEE---------EEEVESVGENSGFFYSEVAKI--
        KG+ ++PY   C+YCGA Y  H KRN    M+ H E+   Y   R       D  ++ L  + +EE           E + E+VG+       E + +  
Subjt:  KGNIDDPYDVECEYCGALYISHLKRNRMEDMEAHTEN---YASGRPCCGGAEDGYKENLILESEEEEE---------EEEVESVGENSGFFYSEVAKI--

Query:  ---LMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLRKIF
            +A+M++++KLP KFVE +GF+RF+ +  C   P+FVIPS+ T+AK IL IY +EKQ L+ +F
Subjt:  ---LMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLRKIF

TrEMBL top hitse value%identityAlignment
A0A1S4E5M3 zinc finger BED domain-containing protein RICESLEEPER 3-like1.4e-1334.3Show/hide
Query:  QNDGKKKGNIDDPYDVECEYCGALYISHLKRNRMEDMEAHTEN---YASGRPCCGGAEDGYKENLILESEEE-----------EEEEEVESVGENSGF--
        Q+  + KG+ ++PY   C+YCGA Y  H KRN    M+ H E+   Y   R       D +++    + +EE           + +EE +  G +     
Subjt:  QNDGKKKGNIDDPYDVECEYCGALYISHLKRNRMEDMEAHTEN---YASGRPCCGGAEDGYKENLILESEEE-----------EEEEEVESVGENSGF--

Query:  -FYSEVAKILMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLRKIF
           SE  +  MA+MI++++LP KFVE +GF+RF+ +      P+FV+PS+ T+A  IL+IY +EKQ L+ IF
Subjt:  -FYSEVAKILMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLRKIF

A0A5D3E6G3 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.4e-1334.3Show/hide
Query:  QNDGKKKGNIDDPYDVECEYCGALYISHLKRNRMEDMEAHTEN---YASGRPCCGGAEDGYKENLILESEEE-----------EEEEEVESVGENSGF--
        Q+  + KG+ ++PY   C+YCGA Y  H KRN    M+ H E+   Y   R       D +++    + +EE           + +EE +  G +     
Subjt:  QNDGKKKGNIDDPYDVECEYCGALYISHLKRNRMEDMEAHTEN---YASGRPCCGGAEDGYKENLILESEEE-----------EEEEEVESVGENSGF--

Query:  -FYSEVAKILMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLRKIF
           SE  +  MA+MI++++LP KFVE +GF+RF+ +      P+FV+PS+ T+A  IL+IY +EKQ L+ IF
Subjt:  -FYSEVAKILMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLRKIF

A0A6J1DE70 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X11.5e-1839.43Show/hide
Query:  MNPPPAVKVEVANMDENDQNDGKKKGNIDDPYDVECEYCGALYISHLKRNRMEDMEAHTENYASG-----RPCCGGAEDGYKENLILESEEEEEEEEVES
        MN P    V   N     QND K+KG       V+C  C ALY  H KRN +E M+A+ +NY+ G        CGG              +E   E ++S
Subjt:  MNPPPAVKVEVANMDENDQNDGKKKGNIDDPYDVECEYCGALYISHLKRNRMEDMEAHTENYASG-----RPCCGGAEDGYKENLILESEEEEEEEEVES

Query:  VGENSGFFYSEVAKILMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLR
          +     + E  +IL+AKMI+I KLPL FV++EGFRRF++Q++  + P+FVIPS  T+ + ILEIY+ EK  +R
Subjt:  VGENSGFFYSEVAKILMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLR

A0A6J1DFA9 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X21.5e-1839.43Show/hide
Query:  MNPPPAVKVEVANMDENDQNDGKKKGNIDDPYDVECEYCGALYISHLKRNRMEDMEAHTENYASG-----RPCCGGAEDGYKENLILESEEEEEEEEVES
        MN P    V   N     QND K+KG       V+C  C ALY  H KRN +E M+A+ +NY+ G        CGG              +E   E ++S
Subjt:  MNPPPAVKVEVANMDENDQNDGKKKGNIDDPYDVECEYCGALYISHLKRNRMEDMEAHTENYASG-----RPCCGGAEDGYKENLILESEEEEEEEEVES

Query:  VGENSGFFYSEVAKILMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLR
          +     + E  +IL+AKMI+I KLPL FV++EGFRRF++Q++  + P+FVIPS  T+ + ILEIY+ EK  +R
Subjt:  VGENSGFFYSEVAKILMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLR

A0A6J1DGW5 zinc finger BED domain-containing protein RICESLEEPER 2-like1.5e-2641.97Show/hide
Query:  MNPPPAVKVEVANMDEND-------------QNDGKKKGNIDDPYDVECEYCGALYISHLKRNRM-EDMEAHTENYASGRPCCGGAEDGYKENLILESEE
        MN P   +VEV ++ E++             QN  K+KGN+D P+ VE + CGALY SH KRN+M ED+E +++ +        G  +  +E+L   SEE
Subjt:  MNPPPAVKVEVANMDEND-------------QNDGKKKGNIDDPYDVECEYCGALYISHLKRNRM-EDMEAHTENYASGRPCCGGAEDGYKENLILESEE

Query:  EEEE-----EEVESVGENS--GFFYSEVAKILMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLRKI
        E E+     +  +S   ++  G F ++ A+IL+A+MI+IDKLPL FV DEGFR F+E+ +C + P+FV+PS  T+A+ ILEIYQS K  LR++
Subjt:  EEEE-----EEVESVGENS--GFFYSEVAKILMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLRKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCTCCACCTGCAGTCAAGGTTGAGGTTGCAAACATGGATGAAAATGATCAAAACGATGGAAAGAAAAAAGGGAACATTGATGATCCTTATGATGTTGAGTGTGA
ATATTGTGGTGCTTTATACATCAGTCATTTAAAGAGAAATAGGATGGAAGATATGGAAGCACATACCGAGAACTATGCTTCTGGTCGGCCTTGTTGTGGTGGGGCAGAAG
ATGGATATAAAGAGAATTTGATTTTAGAAAGTGAGGAGGAGGAAGAGGAAGAGGAAGTTGAGAGTGTAGGTGAGAACAGTGGATTTTTTTATTCTGAAGTTGCAAAAATA
CTAATGGCAAAAATGATCATGATTGATAAATTGCCCCTCAAGTTTGTGGAAGATGAAGGGTTTAGAAGGTTTTTGGAGCAAACTTTGTGTAAATATGTTCCACAGTTTGT
CATTCCCTCTCAACCTACATTAGCTAAGTATATATTGGAAATATACCAGAGTGAGAAACAATCTCTGAGGAAGATTTTTGGGGAATAA
mRNA sequenceShow/hide mRNA sequence
TTGGATTGAAGACTGGTAAACAAAATCAAACATAATCAAATGGGGCTCACTTTTTATATTATGTCTGATTTATTATGTTGCTAATGGGTAAATGTGACCTAACATTCTAT
TTTACATTGACTGAAACAGAAAGTGATGTTAATTTTGATTGAATCTCCTTCTTAGCCTTAGAATTAGAGATAATGTTCGTTATCTACTCTCTTCTAATGATTTAGATCCA
CTTTAATAAGCTTTTCAAACTCTTGTAGGGAAAATCATGAATCCTCCACCTGCAGTCAAGGTTGAGGTTGCAAACATGGATGAAAATGATCAAAACGATGGAAAGAAAAA
AGGGAACATTGATGATCCTTATGATGTTGAGTGTGAATATTGTGGTGCTTTATACATCAGTCATTTAAAGAGAAATAGGATGGAAGATATGGAAGCACATACCGAGAACT
ATGCTTCTGGTCGGCCTTGTTGTGGTGGGGCAGAAGATGGATATAAAGAGAATTTGATTTTAGAAAGTGAGGAGGAGGAAGAGGAAGAGGAAGTTGAGAGTGTAGGTGAG
AACAGTGGATTTTTTTATTCTGAAGTTGCAAAAATACTAATGGCAAAAATGATCATGATTGATAAATTGCCCCTCAAGTTTGTGGAAGATGAAGGGTTTAGAAGGTTTTT
GGAGCAAACTTTGTGTAAATATGTTCCACAGTTTGTCATTCCCTCTCAACCTACATTAGCTAAGTATATATTGGAAATATACCAGAGTGAGAAACAATCTCTGAGGAAGA
TTTTTGGGGAATAAGGTCCTACAATTTCTCTCACAATTGATACGTGGACGTCGGATCACGACATAAACTATATAGTTCTTACTGGACATTTCATTGATGTCAAAGAAGAA
GATTCTTAATTTTTGTCCAATTGAGAATCTCAATGGAGAGACTATTGGAAAAGGAGTAGTATCTTATTTGATGAAATGGGGTATTGAAAAAATATTGATTTTCACCATAA
ATGATGGTAGTTCAAATGATGCTGCCATTGCTTATTTAGTTCACCATTTCAAGAATATGTTGGTTATGGATGGTAAATTTATGTACGTTAGATGTTGTGCCCACATTATT
AATTTGATCGTATGTGATATTATGGAAGATTTTCATGAGTTGATATCAAAGAATTTGAAATGTTGTTAGGTCTGTGAGATCTACTCCTGAATAATTTAGGATCTTCGAAA
AATGTATTGCAGAGGAGAACCTATCTAGCAAGAGTGTCGTGTGCCTTGATTTTCCAAATATGTGGGACTATACCTACTTGATGCTTGAGGGAGGGAGCAGAGAAATCTGA
AAAAGCATTTGAAAGACTAAAGATCTATGAGAAGGCTTAGTTGGAAGAGGATATTCCCGCTAGCAAAGATTGGGAAGTTGTCAGAACACTTGTTCCGTTTTTATCGCCGT
TTTATAAAGCGACTTTAAGACTCTCTGGTTCTCTTCATGCCCCTTCAAATGTGATCTTTGATGAGATAAGCACCATCCAGAATTACATAAAAAAGTTTTCTTCCAATTGT
GATGATCTTGTTCTCAAAGACATGGCAACAAAAATGCAAGTGAAGTATGCCAACAATGCCTCATCTACTCAAGGCGTGACCTGTCCTTCAAATGCAGGAGAAAGTTCTAC
AAAAACTGATGTTACAAAGGCTTTCCGTTTTTACAGATATGTTTGAAGCAATGTACGAGGATAAAAATCTTGAGTCAGCCTCAGAGTTGGACATCTACTTGATGGAGTTG
AGAACTTAATTCTTTACCAGTAGTTTTTTAAAATTTCACTTAAAAAATAGAGTTGGTCCCTTTTATAAAATTAGTTGAGTGTTGATAGTCATAAATTTATTTTGTAGACA
ACAAAGAAAAATTATACTGCATAATGAAAATTAGATAAAGAATGATAATAATAGTT
Protein sequenceShow/hide protein sequence
MNPPPAVKVEVANMDENDQNDGKKKGNIDDPYDVECEYCGALYISHLKRNRMEDMEAHTENYASGRPCCGGAEDGYKENLILESEEEEEEEEVESVGENSGFFYSEVAKI
LMAKMIMIDKLPLKFVEDEGFRRFLEQTLCKYVPQFVIPSQPTLAKYILEIYQSEKQSLRKIFGE