CuGenDBv2

Gene ID	Cmc04g0110201
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Genome location	CMiso1.1chr04:29490176..29491005
RNA-Seq Expression	Cmc04g0110201
Synteny	Cmc04g0110201
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0005739 - mitochondrion (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0005525 - GTP binding (molecular function) GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor (molecular function)
InterPro domains	IPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0031941.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.1e-106

79.23

Show/hide

Query:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE-----------------------------SPKAWFDRFT
        KA+LVAKGFTQTYG+DYSETFSPVAKLNTVRVLLS+ VNK WPLYQLDVKNAFLNGDLVEE                             SP+AWFDRFT
Subjt:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE-----------------------------SPKAWFDRFT

Query:  TFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG
        TFVKSQGYSQGHSDHTLFTK  K GKI ILIVYVDDIVL+GDDQ EISQLKQRMG+EFEIK+L NLKYFLG+EVARSKEGISVSQRKYTLDLLTET MLG
Subjt:  TFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG

Query:  CRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPY
        CR  DTPIEFNCKLGNSDDQV VD E YQ LVGKLIYLSHT PDISF VSVVSQFMQAPY
Subjt:  CRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPY

KAA0035474.1 Beta-galactosidase [Cucumis melo var. makuwa]

3.7e-107

79.62

Show/hide

Query:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE-----------------------------SPKAWFDRFT
        KA+LVAKGFTQTYG+DYSETFSPVAKLNTVRVLLS+ VNK WPLYQLDVKNAFLNGDLVEE                             SP+AWFDRFT
Subjt:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE-----------------------------SPKAWFDRFT

Query:  TFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG
        TFVKSQGYSQGHSDHTLFTK  K GKI ILIVYVDDIVL+GDDQ EISQLKQRMG+EFEIK+L NLKYFLG+EVARSKEGISVSQRKYTLDLLTET MLG
Subjt:  TFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG

Query:  CRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPY
        CR  DTPIEFNCKLGNSDDQV VD E YQ LVGKLIYLSHT PDISFVVSVVSQFMQAPY
Subjt:  CRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPY

TYJ99952.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.1e-106

79.23

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Query:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE-----------------------------SPKAWFDRFT
        KA+LVAKGFTQTYG+DYSETFSPVAKLNTVRVLLS+ VNK WPLYQLDVKNAFLNGDLVEE                             SP+AWFDRFT
Subjt:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE-----------------------------SPKAWFDRFT

Query:  TFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG
        TFVKSQGYSQGHSDHTLFTK  K GKI ILIVYVDDIVL+GDDQ EISQLKQRMG+EFEIK+L NLKYFLG+EVARSKEGISVSQRKYTLDLLTET MLG
Subjt:  TFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG

Query:  CRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPY
        CR  DTPIEFNCKLGNSDDQV VD E YQ LVGKLIYLSHT PDISF VSVVSQFMQAPY
Subjt:  CRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPY

TYK08054.1 Beta-galactosidase [Cucumis melo var. makuwa]

1.1e-106

79.23

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Query:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE-----------------------------SPKAWFDRFT
        KA+LVAKGFTQTYG+DYSETFSPVAKLNTVRVLLS+ VNK WPLYQLDVKNAFLNGDLVEE                             SP+AWFDRFT
Subjt:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE-----------------------------SPKAWFDRFT

Query:  TFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG
        TFVKSQGYSQGHSDHTLFTK  K GKI ILIVYVDDIVL+GDDQ EISQLKQRMG+EFEIK+L NLKYFLG+EVARSKEGISVSQRKYTLDLLTET MLG
Subjt:  TFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG

Query:  CRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPY
        CR  DTPIEFNCKLGNSDDQV VD E YQ LVGKLIYLSHT PDISF VSVVSQFMQAPY
Subjt:  CRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPY

TYK31050.1 Beta-galactosidase [Cucumis melo var. makuwa]

3.7e-107

79.62

Show/hide

Query:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE-----------------------------SPKAWFDRFT
        KA+LVAKGFTQTYG+DYSETFSPVAKLNTVRVLLS+ VNK WPLYQLDVKNAFLNGDLVEE                             SP+AWFDRFT
Subjt:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE-----------------------------SPKAWFDRFT

Query:  TFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG
        TFVKSQGYSQGHSDHTLFTK  K GKI ILIVYVDDIVL+GDDQ EISQLKQRMG+EFEIK+L NLKYFLG+EVARSKEGISVSQRKYTLDLLTET MLG
Subjt:  TFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG

Query:  CRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPY
        CR  DTPIEFNCKLGNSDDQV VD E YQ LVGKLIYLSHT PDISFVVSVVSQFMQAPY
Subjt:  CRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPY

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SW06 Beta-galactosidase

1.8e-107

79.62

Show/hide

Query:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE-----------------------------SPKAWFDRFT
        KA+LVAKGFTQTYG+DYSETFSPVAKLNTVRVLLS+ VNK WPLYQLDVKNAFLNGDLVEE                             SP+AWFDRFT
Subjt:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE-----------------------------SPKAWFDRFT

Query:  TFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG
        TFVKSQGYSQGHSDHTLFTK  K GKI ILIVYVDDIVL+GDDQ EISQLKQRMG+EFEIK+L NLKYFLG+EVARSKEGISVSQRKYTLDLLTET MLG
Subjt:  TFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG

Query:  CRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPY
        CR  DTPIEFNCKLGNSDDQV VD E YQ LVGKLIYLSHT PDISFVVSVVSQFMQAPY
Subjt:  CRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPY

A0A5A7VLQ7 Beta-galactosidase

5.3e-107

79.23

Show/hide

Query:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE-----------------------------SPKAWFDRFT
        KA+LVAKGFTQTYG+DYSETFSPVAKLNTVRVLLS+ VNK WPLYQLDVKNAFLNGDLVEE                             SP+AWFDRFT
Subjt:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE-----------------------------SPKAWFDRFT

Query:  TFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG
        TFVKSQGYSQGHSDHTLFTK  K GKI ILIVYVDDIVL+GDDQ EISQLKQRMG+EFEIK+L NLKYFLG+EVARSKEGISVSQRKYTLDLLTET MLG
Subjt:  TFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG

Query:  CRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPY
        CR  DTPIEFNCKLGNSDDQV VD E YQ LVGKLIYLSHT PDISF VSVVSQFMQAPY
Subjt:  CRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPY

A0A5D3BJK7 Beta-galactosidase

5.3e-107

79.23

Show/hide

Query:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE-----------------------------SPKAWFDRFT
        KA+LVAKGFTQTYG+DYSETFSPVAKLNTVRVLLS+ VNK WPLYQLDVKNAFLNGDLVEE                             SP+AWFDRFT
Subjt:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE-----------------------------SPKAWFDRFT

Query:  TFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG
        TFVKSQGYSQGHSDHTLFTK  K GKI ILIVYVDDIVL+GDDQ EISQLKQRMG+EFEIK+L NLKYFLG+EVARSKEGISVSQRKYTLDLLTET MLG
Subjt:  TFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG

Query:  CRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPY
        CR  DTPIEFNCKLGNSDDQV VD E YQ LVGKLIYLSHT PDISF VSVVSQFMQAPY
Subjt:  CRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPY

A0A5D3C4T4 Beta-galactosidase

5.3e-107

79.23

Show/hide

Query:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE-----------------------------SPKAWFDRFT
        KA+LVAKGFTQTYG+DYSETFSPVAKLNTVRVLLS+ VNK WPLYQLDVKNAFLNGDLVEE                             SP+AWFDRFT
Subjt:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE-----------------------------SPKAWFDRFT

Query:  TFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG
        TFVKSQGYSQGHSDHTLFTK  K GKI ILIVYVDDIVL+GDDQ EISQLKQRMG+EFEIK+L NLKYFLG+EVARSKEGISVSQRKYTLDLLTET MLG
Subjt:  TFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG

Query:  CRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPY
        CR  DTPIEFNCKLGNSDDQV VD E YQ LVGKLIYLSHT PDISF VSVVSQFMQAPY
Subjt:  CRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPY

A0A5D3E603 Beta-galactosidase

1.8e-107

79.62

Show/hide

Query:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE-----------------------------SPKAWFDRFT
        KA+LVAKGFTQTYG+DYSETFSPVAKLNTVRVLLS+ VNK WPLYQLDVKNAFLNGDLVEE                             SP+AWFDRFT
Subjt:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE-----------------------------SPKAWFDRFT

Query:  TFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG
        TFVKSQGYSQGHSDHTLFTK  K GKI ILIVYVDDIVL+GDDQ EISQLKQRMG+EFEIK+L NLKYFLG+EVARSKEGISVSQRKYTLDLLTET MLG
Subjt:  TFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG

Query:  CRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPY
        CR  DTPIEFNCKLGNSDDQV VD E YQ LVGKLIYLSHT PDISFVVSVVSQFMQAPY
Subjt:  CRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPY

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

5.0e-30

29.1

Show/hide

Query:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE----------------------------SPKAWFDRFTT
        KA+LVA+GFTQ Y +DY ETF+PVA++++ R +LS+V+     ++Q+DVK AFLNG L EE                            + + WF+ F  
Subjt:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE----------------------------SPKAWFDRFTT

Query:  FVKSQGYSQGHSDHTLF-TKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG
         +K   +     D  ++      I + + +++YVDD+V++  D   ++  K+ +  +F + +L  +K+F+GI +   ++ I +SQ  Y   +L++ +M  
Subjt:  FVKSQGYSQGHSDHTLF-TKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLG

Query:  CRLTDTPI--EFNCKLGNSDDQVLVDNELYQHLVGKLIYLS-HTCPDISFVVSVVSQFMQAPYRNTWK
        C    TP+  + N +L NSD+     N   + L+G L+Y+   T PD++  V+++S++        W+
Subjt:  CRLTDTPI--EFNCKLGNSDDQVLVDNELYQHLVGKLIYLS-HTCPDISFVVSVVSQFMQAPYRNTWK

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

4.4e-34

32.01

Show/hide

Query:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE------------------------------SPKAWFDRF
        KA+LV KGF Q  G+D+ E FSPV K+ ++R +LS+  +    + QLDVK AFL+GDL EE                              +P+ W+ +F
Subjt:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE------------------------------SPKAWFDRF

Query:  TTFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEG--ISVSQRKYTLDLLTETD
         +F+KSQ Y + +SD  ++ K F     +IL++YVDD+++ G D+  I++LK  +   F++K+L   +  LG+++ R +    + +SQ KY   +L   +
Subjt:  TTFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEG--ISVSQRKYTLDLLTETD

Query:  MLGCRLTDTPIEFNCKLGNSDDQVLVDNE------LYQHLVGKLIY-LSHTCPDISFVVSVVSQFMQAPYRNTWKLSK
        M   +   TP+  + KL        V+ +       Y   VG L+Y +  T PDI+  V VVS+F++ P +  W+  K
Subjt:  MLGCRLTDTPIEFNCKLGNSDDQVLVDNE------LYQHLVGKLIY-LSHTCPDISFVVSVVSQFMQAPYRNTWKLSK

P92519 Uncharacterized mitochondrial protein AtMg00810

1.0e-14

35.88

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Query:  LIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLGCRLTDTPIEFNCKLGNS-DDQVLVDNELY
        L++YVDDI+L+G     ++ L  ++ + F +K+L  + YFLGI++     G+ +SQ KY   +L    ML C+   TP+    KL +S       D   +
Subjt:  LIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLGCRLTDTPIEFNCKLGNS-DDQVLVDNELY

Query:  QHLVGKLIYLSHTCPDISFVVSVVSQFMQAP
        + +VG L YL+ T PDIS+ V++V Q M  P
Subjt:  QHLVGKLIYLSHTCPDISFVVSVVSQFMQAP

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1

1.2e-42

37.93

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Query:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDL------------------------------VEESPKAWFDRF
        KA+LVAKG+ Q  G+DY+ETFSPV K  ++R++L + V++ WP+ QLDV NAFL G L                              ++++P+AW+   
Subjt:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDL------------------------------VEESPKAWFDRF

Query:  TTFVKSQGYSQGHSDHTLFTKVFKIGK-IVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDM
          ++ + G+    SD +LF  V + GK IV ++VYVDDI+++G+D   +      +   F +K+ E L YFLGIE  R   G+ +SQR+Y LDLL  T+M
Subjt:  TTFVKSQGYSQGHSDHTLFTKVFKIGK-IVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDM

Query:  LGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAP
        +  +   TP+  + KL       L D   Y+ +VG L YL+ T PDIS+ V+ +SQFM  P
Subjt:  LGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAP

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2

7.2e-45

37.41

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Query:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE------------------------------SPKAWFDRF
        KA+LVAKG+ Q  G+DY+ETFSPV K  ++R++L + V++ WP+ QLDV NAFL G L +E                              +P+AW+   
Subjt:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE------------------------------SPKAWFDRF

Query:  TTFVKSQGYSQGHSDHTLFTKVFKIGK-IVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDM
         T++ + G+    SD +LF  V + G+ I+ ++VYVDDI+++G+D   +      +   F +K  E+L YFLGIE  R  +G+ +SQR+YTLDLL  T+M
Subjt:  TTFVKSQGYSQGHSDHTLFTKVFKIGK-IVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDM

Query:  LGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPYRNTWKLSK
        L  +   TP+  + KL       L D   Y+ +VG L YL+ T PD+S+ V+ +SQ+M  P  + W   K
Subjt:  LGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAPYRNTWKLSK

Arabidopsis top hits

e value

%identity

Alignment

AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8

6.5e-49

39.39

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Query:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE----------------------------------SPKAW
        KA+LVAKG+TQ  G+D+ ETFSPV KL +V+++L+I     + L+QLD+ NAFLNGDL EE                                  + + W
Subjt:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEE----------------------------------SPKAW

Query:  FDRFTTFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTE
        F +F+  +   G+ Q HSDHT F K+      + ++VYVDDI++  ++ A + +LK ++ + F++++L  LKYFLG+E+ARS  GI++ QRKY LDLL E
Subjt:  FDRFTTFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTE

Query:  TDMLGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAP
        T +LGC+ +  P++ +           VD + Y+ L+G+L+YL  T  DISF V+ +SQF +AP
Subjt:  TDMLGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCPDISFVVSVVSQFMQAP

ATMG00810.1 DNA/RNA polymerases superfamily protein

7.2e-16

35.88

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Query:  LIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLGCRLTDTPIEFNCKLGNS-DDQVLVDNELY
        L++YVDDI+L+G     ++ L  ++ + F +K+L  + YFLGI++     G+ +SQ KY   +L    ML C+   TP+    KL +S       D   +
Subjt:  LIVYVDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLGCRLTDTPIEFNCKLGNS-DDQVLVDNELY

Query:  QHLVGKLIYLSHTCPDISFVVSVVSQFMQAP
        + +VG L YL+ T PDIS+ V++V Q M  P
Subjt:  QHLVGKLIYLSHTCPDISFVVSVVSQFMQAP

ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)

8.3e-04

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Query:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSI
        KA+LVAKGF Q  G+ + ET+SPV +  T+R +L++
Subjt:  KAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSI

Sequences

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CDS sequence

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ATGAAACGCTTGACAGACAAGGCAAAGTTAGTTGCAAAAGGATTTACTCAGACTTATGGTGTTGATTATTCAGAAACTTTTTCTCCTGTTGCTAAATTGAATACTGTTAG
AGTCCTTCTTTCTATTGTCGTAAACAAATATTGGCCTTTATATCAGCTGGATGTTAAAAATGCTTTTCTGAATGGAGATCTAGTAGAGGAGTCACCTAAAGCATGGTTTG
ACAGATTCACTACTTTTGTCAAGTCCCAAGGATACAGTCAAGGACACTCTGATCATACTTTATTTACAAAAGTTTTCAAGATAGGGAAGATTGTAATTCTGATAGTTTAT
GTGGATGACATCGTTTTGTCTGGAGATGATCAGGCAGAAATCAGTCAACTTAAGCAGAGAATGGGTAATGAATTTGAAATCAAGAATTTGGAAAATCTGAAATATTTCCT
TGGAATAGAGGTGGCCAGATCTAAAGAAGGCATCTCCGTGTCTCAAAGAAAATACACCCTTGATCTGCTAACCGAGACAGATATGTTGGGATGTCGTCTCACTGACACTC
CTATTGAATTCAATTGCAAACTAGGAAACTCTGATGATCAAGTTCTAGTTGATAATGAACTATATCAGCACCTTGTAGGTAAATTGATTTACTTATCTCATACTTGTCCT
GATATTTCCTTTGTTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATAGGAACACATGGAAGCTGTCAAAAGAATTCTGA

mRNA sequence

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Protein sequence

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MKRLTDKAKLVAKGFTQTYGVDYSETFSPVAKLNTVRVLLSIVVNKYWPLYQLDVKNAFLNGDLVEESPKAWFDRFTTFVKSQGYSQGHSDHTLFTKVFKIGKIVILIVY
VDDIVLSGDDQAEISQLKQRMGNEFEIKNLENLKYFLGIEVARSKEGISVSQRKYTLDLLTETDMLGCRLTDTPIEFNCKLGNSDDQVLVDNELYQHLVGKLIYLSHTCP
DISFVVSVVSQFMQAPYRNTWKLSKEF

Cmc04g0110201 (gene) of Melon (Charmono) v1.1 genome