; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0110791 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0110791
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionCCR4-NOT transcription complex subunit 1
Genome locationCMiso1.1chr04:30032124..30057285
RNA-Seq ExpressionCmc04g0110791
SyntenyCmc04g0110791
Gene Ontology termsGO:0017148 - negative regulation of translation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048830.1 CCR4-NOT transcription complex subunit 1 [Cucumis melo var. makuwa]1.1e-2587.32Show/hide
Query:  MKQITPTSLLKDGKREIDGNPDFLNKDIGASQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQ
        MK+ITPTSLLKD KREIDGNPDF NKD+GASQTQ+ AEVK G+MSSLNQVELPLEVATPSNSGNHTH LSQ
Subjt:  MKQITPTSLLKDGKREIDGNPDFLNKDIGASQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQ
TYK20782.1 CCR4-NOT transcription complex subunit 1 [Cucumis melo var. makuwa]1.1e-2587.32Show/hide
Query:  MKQITPTSLLKDGKREIDGNPDFLNKDIGASQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQ
        MK+ITPTSLLKD KREIDGNPDF NKD+GASQTQ+ AEVK G+MSSLNQVELPLEVATPSNSGNHTH LSQ
Subjt:  MKQITPTSLLKDGKREIDGNPDFLNKDIGASQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQ
XP_008437787.1 PREDICTED: CCR4-NOT transcription complex subunit 1 [Cucumis melo]1.1e-2587.32Show/hide
Query:  MKQITPTSLLKDGKREIDGNPDFLNKDIGASQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQ
        MK+ITPTSLLKD KREIDGNPDF NKD+GASQTQ+ AEVK G+MSSLNQVELPLEVATPSNSGNHTH LSQ
Subjt:  MKQITPTSLLKDGKREIDGNPDFLNKDIGASQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQ
XP_011650636.1 CCR4-NOT transcription complex subunit 1 [Cucumis sativus]6.6e-2688.73Show/hide
Query:  MKQITPTSLLKDGKREIDGNPDFLNKDIGASQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQ
        MK+ITPTSLLKD KREIDGNPDF NKD+GASQTQ+ AEVK GIMSSLNQVELPLEVATPSNSGNHTH LSQ
Subjt:  MKQITPTSLLKDGKREIDGNPDFLNKDIGASQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQ
XP_016899759.1 PREDICTED: uncharacterized protein LOC103487079 [Cucumis melo]6.4e-37100Show/hide
Query:  MSSLNQVELPLEVATPSNSGNHTHPLSQGGLHERKLVDGLLNVRRNVSQKFKSAYTSYINDFRRYMGQDEDEAARMEECS
        MSSLNQVELPLEVATPSNSGNHTHPLSQGGLHERKLVDGLLNVRRNVSQKFKSAYTSYINDFRRYMGQDEDEAARMEECS
Subjt:  MSSLNQVELPLEVATPSNSGNHTHPLSQGGLHERKLVDGLLNVRRNVSQKFKSAYTSYINDFRRYMGQDEDEAARMEECS
TrEMBL top hitse value%identityAlignment
A0A1S3AUU2 CCR4-NOT transcription complex subunit 15.4e-2687.32Show/hide
Query:  MKQITPTSLLKDGKREIDGNPDFLNKDIGASQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQ
        MK+ITPTSLLKD KREIDGNPDF NKD+GASQTQ+ AEVK G+MSSLNQVELPLEVATPSNSGNHTH LSQ
Subjt:  MKQITPTSLLKDGKREIDGNPDFLNKDIGASQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQ
A0A1S4DUV0 uncharacterized protein LOC1034870793.1e-37100Show/hide
Query:  MSSLNQVELPLEVATPSNSGNHTHPLSQGGLHERKLVDGLLNVRRNVSQKFKSAYTSYINDFRRYMGQDEDEAARMEECS
        MSSLNQVELPLEVATPSNSGNHTHPLSQGGLHERKLVDGLLNVRRNVSQKFKSAYTSYINDFRRYMGQDEDEAARMEECS
Subjt:  MSSLNQVELPLEVATPSNSGNHTHPLSQGGLHERKLVDGLLNVRRNVSQKFKSAYTSYINDFRRYMGQDEDEAARMEECS
A0A5A7U0A1 CCR4-NOT transcription complex subunit 15.4e-2687.32Show/hide
Query:  MKQITPTSLLKDGKREIDGNPDFLNKDIGASQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQ
        MK+ITPTSLLKD KREIDGNPDF NKD+GASQTQ+ AEVK G+MSSLNQVELPLEVATPSNSGNHTH LSQ
Subjt:  MKQITPTSLLKDGKREIDGNPDFLNKDIGASQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQ
A0A5D3DB11 CCR4-NOT transcription complex subunit 15.4e-2687.32Show/hide
Query:  MKQITPTSLLKDGKREIDGNPDFLNKDIGASQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQ
        MK+ITPTSLLKD KREIDGNPDF NKD+GASQTQ+ AEVK G+MSSLNQVELPLEVATPSNSGNHTH LSQ
Subjt:  MKQITPTSLLKDGKREIDGNPDFLNKDIGASQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQ
A0A6J1IQF9 CCR4-NOT transcription complex subunit 1-like3.0e-2483.1Show/hide
Query:  MKQITPTSLLKDGKREIDGNPDFLNKDIGASQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQ
        MK+ITPTSLLKD KRE++GNPDF NKD+GASQTQ+ AE K  IMSSLNQVELPLEVATPSNSGNHTH LSQ
Subjt:  MKQITPTSLLKDGKREIDGNPDFLNKDIGASQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02080.1 transcription regulators2.0e-1247.73Show/hide
Query:  MKQITPTSLLKDGKREIDGNPDFLNKDIGA---SQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQGGLHERKLVDGLLN
        MK++ PTSLLKD KREIDGNPDF NKD G    SQ Q+  E K   +S L Q++LPL+VA   N+   +  LSQ    +R   + L++
Subjt:  MKQITPTSLLKDGKREIDGNPDFLNKDIGA---SQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQGGLHERKLVDGLLN
AT1G02080.2 transcription regulators2.0e-1247.73Show/hide
Query:  MKQITPTSLLKDGKREIDGNPDFLNKDIGA---SQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQGGLHERKLVDGLLN
        MK++ PTSLLKD KREIDGNPDF NKD G    SQ Q+  E K   +S L Q++LPL+VA   N+   +  LSQ    +R   + L++
Subjt:  MKQITPTSLLKDGKREIDGNPDFLNKDIGA---SQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQGGLHERKLVDGLLN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACAAATAACACCAACTTCTCTTCTCAAAGATGGGAAGAGAGAAATTGATGGCAATCCTGATTTTTTGAACAAAGACATTGGAGCATCTCAGACACAATTGGCAGC
CGAAGTGAAATTCGGCATAATGTCTTCTTTGAATCAAGTGGAGCTCCCGCTAGAGGTTGCAACACCATCAAATTCTGGAAATCATACTCACCCGTTATCTCAGGGAGGAT
TACATGAGCGGAAGTTGGTGGACGGACTTTTGAATGTTCGGAGAAATGTTAGCCAAAAATTTAAGTCGGCATACACAAGCTACATAAATGATTTTCGACGGTATATGGGC
CAAGATGAAGATGAAGCGGCAAGGATGGAGGAATGCTCTTTTCATATTTTTCAGAAGTATACAGTTTGA
mRNA sequenceShow/hide mRNA sequence
GATATGTTATTTCTCCTTTGCTCTCTCACTTTTCTCCCTTGCTCTCTCACTCTGCTCTCTCCCTTTGCTCTCTCACTTTTCTCCCTTGCTCTCTCACTTTCTCCCTTTGC
TCTCTCACCGTCTCCCTCGTCTTCAACAGGGTTTCCGGGAATGTCCGACAGAGTTTGCTATATCCCTCCTCCAAACCTTGGTTGCGGATGAATCGAGTGTAATTTCAGAA
CTTCGCAATCTTGTTGAGCATTAGCTAAGGTTGCTGCAAAACCGGATCTTCCGAGCCTTTTTATGATTAATTATATTTCACTCGCTAATCTTGAAGCCAAAGCAAAAGAA
TTTACTGAAATCTCCAAGGAGCAGTTTTATCCCTGGTTTGCTCACTATATGGTCATGAAGAGGGCTAGCATCGAGCCGGATTTCCATGATTTGTACTTGAAGTTCCTGGA
CAGAGTTAATTCAAAAGCTTTAAGTAAAGAGATCGTTCAGGCTACTTATGAGAACTGCAAGGTTCTGTTAGGATCAGACCTTATAAAGTCAAGTTCAGAAGAACATTCAT
TGCTTAAGAATTTGGGAAGCTGGCTTGGGAAACTAACAATTGGCGGGAACCAAGTGCTGTGAGCCCGTTGAATAGATCCAAAATCTTTGATAATTGAGGCATATGAAAAA
GGGGCTAATGATTGCAGTAACGCCATTTACTTCCAAGATCCTTGAACCATGTCAAAGTAGTTTAGCATACCAACCTCCAAACCCTTGGACCATGGGCATTCTTGGACTAC
TGGCTGAGTTTTATTCAATGCCTAACTTGAAAATGAACCTGAAGTTTGCATTGAGGTTTTATTCAAGAATCTCAAGGTGGATATGAAACAAATAACACCAACTTCTCTTC
TCAAAGATGGGAAGAGAGAAATTGATGGCAATCCTGATTTTTTGAACAAAGACATTGGAGCATCTCAGACACAATTGGCAGCCGAAGTGAAATTCGGCATAATGTCTTCT
TTGAATCAAGTGGAGCTCCCGCTAGAGGTTGCAACACCATCAAATTCTGGAAATCATACTCACCCGTTATCTCAGGGAGGATTACATGAGCGGAAGTTGGTGGACGGACT
TTTGAATGTTCGGAGAAATGTTAGCCAAAAATTTAAGTCGGCATACACAAGCTACATAAATGATTTTCGACGGTATATGGGCCAAGATGAAGATGAAGCGGCAAGGATGG
AGGAATGCTCTTTTCATATTTTTCAGAAGTATACAGTTTGAAATGTCATGTCATCTACAACTTTATTGTTTACGGGTGATTTACTCTGAGGGAGAACGGAAGTACAAGGA
CATCACTCTTGACCTTGTTCGCAATGAATTATTAAATCTTGCAGAGTATAATGTTCATATGGTGAAAAGGCTGCGACAGAGTTTGCTATATCCCTCCTCCAAACCTTTGT
TGTGGATGAATCGAGTGTTGCTGCAAAACCTGGATCTTCAGAAGGTTTCTTAAGAAGATTGCTATAATTACTATAACAATGAGAGATGTGTGTCTGTGTTTTCTTGATTC
CTCAGTTTTTTGCCTTTTTTCTGTAACAAGCTCCTGTACCTTCCATAACAAACAAAGAAGATTCTAGTATTCTTGGATCTGAAGATCCAACCGGTTTTCGTGATCAGGTA
ATTTGATTATCCTTTATGATATCTCACGATGTTATTTTTGTATCATCATTTAATGATCTGAGAGCTTTTATAAGAGACCAGAACTGTTTGAAACTGTAGATATTAGTTTT
TGGAGTGTGAATGTCAGGATTACTTTGTAAGGATCTAAACTCCATTAGAGGTAGCTCTCTTAAGAAAGGAGTAATATCAAACTTATATTATTGAATATATAAATTCAGAA
ATATTTCTGCTTCAAATTTCCTTATTAT
Protein sequenceShow/hide protein sequence
MKQITPTSLLKDGKREIDGNPDFLNKDIGASQTQLAAEVKFGIMSSLNQVELPLEVATPSNSGNHTHPLSQGGLHERKLVDGLLNVRRNVSQKFKSAYTSYINDFRRYMG
QDEDEAARMEECSFHIFQKYTV