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Cmc04g0111031 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0111031
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionHMA domain-containing protein
Genome locationCMiso1.1chr04:30304828..30308402
RNA-Seq ExpressionCmc04g0111031
SyntenyCmc04g0111031
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147445.1 uncharacterized protein LOC101219347 [Cucumis sativus]4.2e-6284.43Show/hide
Query:  SLESLFVSGSIPIPSPRD--------RHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSV
        S  S   S S  +PSP +        RHSP+QGRSLPR LKQVRAVEEDASVPELGVE+EASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSV
Subjt:  SLESLFVSGSIPIPSPRD--------RHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSV

Query:  TEALEQTEGITGLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        T ALEQTEGI+GLKVQV EGIASV LTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
Subjt:  TEALEQTEGITGLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV

XP_008443474.1 PREDICTED: uncharacterized protein LOC103487059 isoform X1 [Cucumis melo]8.1e-6692.31Show/hide
Query:  SLFVSGSIPIPSPRDRHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTEALEQTEGIT
        SL  S +  + +   RHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTEALEQTEGIT
Subjt:  SLFVSGSIPIPSPRDRHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTEALEQTEGIT

Query:  GLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        GLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
Subjt:  GLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV

XP_016899705.1 PREDICTED: uncharacterized protein LOC103487059 isoform X2 [Cucumis melo]8.4e-79100Show/hide
Query:  MVSMISSLESLFVSGSIPIPSPRDRHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTE
        MVSMISSLESLFVSGSIPIPSPRDRHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTE
Subjt:  MVSMISSLESLFVSGSIPIPSPRDRHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTE

Query:  ALEQTEGITGLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        ALEQTEGITGLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
Subjt:  ALEQTEGITGLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV

XP_023526965.1 uncharacterized protein LOC111790332 [Cucurbita pepo subsp. pepo]7.1e-5479.61Show/hide
Query:  SGSIPIPSPRDRHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTEALEQTEGITGLKV
        S S  + +   RHS V+GRS PR LKQ R VEEDAS+PE GVE E  SPSPS+ PAVTVPVS SD+LTMFFQAEGTLNESA+PSVTEALEQT+GITGLKV
Subjt:  SGSIPIPSPRDRHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTEALEQTEGITGLKV

Query:  QVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        Q+ EGIASV LTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFED+EEVF+
Subjt:  QVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV

XP_038903053.1 uncharacterized protein LOC120089747 [Benincasa hispida]2.5e-5487.14Show/hide
Query:  HSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVNEGIASVVLT
        HSPV GRS  R LKQ +AVEEDAS+PE GVE E  SPSPSD PAVTVPVSPSD+LTMFFQAEGTLNESAIP+VTEALEQTEGITGLKVQV EGIASV LT
Subjt:  HSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVNEGIASVVLT

Query:  KQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        KQTTIQSTGVASSLIETIQGAGFKLQTLNLSFED+EE FV
Subjt:  KQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV

TrEMBL top hitse value%identityAlignment
A0A0A0LC88 HMA domain-containing protein2.0e-6284.43Show/hide
Query:  SLESLFVSGSIPIPSPRD--------RHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSV
        S  S   S S  +PSP +        RHSP+QGRSLPR LKQVRAVEEDASVPELGVE+EASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSV
Subjt:  SLESLFVSGSIPIPSPRD--------RHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSV

Query:  TEALEQTEGITGLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        T ALEQTEGI+GLKVQV EGIASV LTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
Subjt:  TEALEQTEGITGLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV

A0A1S3B868 uncharacterized protein LOC103487059 isoform X13.9e-6692.31Show/hide
Query:  SLFVSGSIPIPSPRDRHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTEALEQTEGIT
        SL  S +  + +   RHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTEALEQTEGIT
Subjt:  SLFVSGSIPIPSPRDRHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTEALEQTEGIT

Query:  GLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        GLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
Subjt:  GLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV

A0A1S4DVG6 uncharacterized protein LOC103487059 isoform X24.1e-79100Show/hide
Query:  MVSMISSLESLFVSGSIPIPSPRDRHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTE
        MVSMISSLESLFVSGSIPIPSPRDRHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTE
Subjt:  MVSMISSLESLFVSGSIPIPSPRDRHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTE

Query:  ALEQTEGITGLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        ALEQTEGITGLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
Subjt:  ALEQTEGITGLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV

A0A5A7UJN3 HMA domain-containing protein4.1e-79100Show/hide
Query:  MVSMISSLESLFVSGSIPIPSPRDRHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTE
        MVSMISSLESLFVSGSIPIPSPRDRHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTE
Subjt:  MVSMISSLESLFVSGSIPIPSPRDRHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTE

Query:  ALEQTEGITGLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        ALEQTEGITGLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
Subjt:  ALEQTEGITGLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV

A0A5D3D1F9 Heavy-metal-associated domain-containing protein3.9e-6692.31Show/hide
Query:  SLFVSGSIPIPSPRDRHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTEALEQTEGIT
        SL  S +  + +   RHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTEALEQTEGIT
Subjt:  SLFVSGSIPIPSPRDRHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTEALEQTEGIT

Query:  GLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        GLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
Subjt:  GLKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G14910.1 Heavy metal transport/detoxification superfamily protein3.0e-3459.7Show/hide
Query:  SLPRFLKQVR-AVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVNEGIASVVLTKQTTIQ
        S   F+KQ R  + + +S+ E G     +   P +   V+VPVSPSD+LTMFFQA+GTLNE+AIP+VT AL+  +G++ LKVQV+EG+A V L KQTT+Q
Subjt:  SLPRFLKQVR-AVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTEALEQTEGITGLKVQVNEGIASVVLTKQTTIQ

Query:  STGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV
        +TGVAS+L+ETIQGAGFKLQTLNLSFED++EV V
Subjt:  STGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTATGATCTCGAGCCTTGAAAGTCTATTTGTCTCAGGTTCAATCCCAATTCCCAGTCCTCGTGATAGACATTCTCCGGTTCAGGGCCGGAGCCTGCCACGCTT
CCTGAAACAAGTCAGGGCAGTTGAAGAGGATGCCTCTGTTCCCGAGCTAGGAGTTGAAACCGAAGCGTCGTCGCCTTCTCCATCTGACCCGCCTGCCGTCACCGTGCCCG
TCTCCCCCTCTGATGTTCTCACCATGTTCTTTCAGGCAGAGGGGACGCTAAATGAATCAGCTATTCCTTCTGTAACTGAGGCTTTGGAGCAAACGGAGGGTATCACCGGG
TTGAAAGTCCAAGTCAATGAGGGCATTGCATCAGTTGTGCTTACAAAACAAACAACAATACAATCTACAGGAGTGGCCTCGAGTTTGATCGAGACCATTCAAGGTGCAGG
TTTTAAGTTACAAACGTTGAATTTGAGTTTTGAGGATGAGGAAGAAGTTTTTGTTTAG
mRNA sequenceShow/hide mRNA sequence
GCCCCAGATGGTTTCTATGATCTCGAGCCTTGAAAGTCTATTTGTCTCAGGTTCAATCCCAATTCCCAGTCCTCGTGATAGACATTCTCCGGTTCAGGGCCGGAGCCTGC
CACGCTTCCTGAAACAAGTCAGGGCAGTTGAAGAGGATGCCTCTGTTCCCGAGCTAGGAGTTGAAACCGAAGCGTCGTCGCCTTCTCCATCTGACCCGCCTGCCGTCACC
GTGCCCGTCTCCCCCTCTGATGTTCTCACCATGTTCTTTCAGGCAGAGGGGACGCTAAATGAATCAGCTATTCCTTCTGTAACTGAGGCTTTGGAGCAAACGGAGGGTAT
CACCGGGTTGAAAGTCCAAGTCAATGAGGGCATTGCATCAGTTGTGCTTACAAAACAAACAACAATACAATCTACAGGAGTGGCCTCGAGTTTGATCGAGACCATTCAAG
GTGCAGGTTTTAAGTTACAAACGTTGAATTTGAGTTTTGAGGATGAGGAAGAAGTTTTTGTTTAGGTACTCTTGATTTTGAAGTGTAAGAATTGGAGAGAGGGAAAGAGA
GAAAATTATGGAGATAGATAAGATAAGGAAAGCTTAACTAAGAGCTCCATTAATCATTTCATGGAAGATAGGACAATGCAGATGGTGAAAACCTATCATTACCAAAATGC
CCTCAAAGTGCTTAAATGTATCAGGTTTGATGAGATTAATCGTTTGCCATTGCTTGATTTTTGTGTATGAACTGCGGGGTTGAAATTTTCTTTTATCTTTAGATCATTAG
TATAGAAATTTGGAATGTCATTAGACCAAATGGCCAATTTGTTTTTGAAATCAATCCCTTTTCTTGCACAGTGCATTATGGTGGCATTTATTTTGTGG
Protein sequenceShow/hide protein sequence
MVSMISSLESLFVSGSIPIPSPRDRHSPVQGRSLPRFLKQVRAVEEDASVPELGVETEASSPSPSDPPAVTVPVSPSDVLTMFFQAEGTLNESAIPSVTEALEQTEGITG
LKVQVNEGIASVVLTKQTTIQSTGVASSLIETIQGAGFKLQTLNLSFEDEEEVFV