; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0111121 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0111121
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr04:30365427..30366254
RNA-Seq ExpressionCmc04g0111121
SyntenyCmc04g0111121
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052097.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]7.3e-12094.09Show/hide
Query:  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLY
        LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY SDLLA SGITDSNTASTPLD NVHLTPYDGVPLEDVSLY
Subjt:  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLY

Query:  RQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKK
        RQLVGSLIYLTVT PDIAYVVHIVSQ MAAPRTIHFTVVLRILRY+KGTLGHGLQFSSQS L+LSGYS+ADWAGDPTDR STT YCFYL DSLISWRSKK
Subjt:  RQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKK

Query:  QSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ
        QSVVSRSSTESEY ALAD TAELLWLRWLLADMGVPQ
Subjt:  QSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ

KAA0053709.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.6e-13594.8Show/hide
Query:  HELGLSHLALPSLNFVLLLVLMTLCSLLATYPLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASS
        HELGLSHLALPSLN VLLLVLMTL SLLATYPLLLLYVDDMIITGNDPQAI DLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY SDLLA S
Subjt:  HELGLSHLALPSLNFVLLLVLMTLCSLLATYPLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASS

Query:  GITDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYS
        GI DSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAY VHIVSQ MAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQS L+LSGYS
Subjt:  GITDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYS

Query:  HADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ
         ADWAGDPTDRRSTTRYCFYL D LISWRSKKQSVVSRSSTESEYHALADTTAELLWL WLLADMGVPQ
Subjt:  HADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ

KAA0064060.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]5.6e-12094.51Show/hide
Query:  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLY
        LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY SDLLA SGITDSNTASTPLD NVHLTPYDGVPLE+VSLY
Subjt:  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLY

Query:  RQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKK
        RQLVGSLIYLTVT PDIAY VHIVSQ MAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQS L+LSGYS ADWAGDPTDRRSTT YCFYL DSLISWRSKK
Subjt:  RQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKK

Query:  QSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ
        QSVVSRSSTESEY ALADTTAELLWLRWLLADMGVPQ
Subjt:  QSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ

TYK00711.1 putative mitochondrial protein [Cucumis melo var. makuwa]9.6e-12084.73Show/hide
Query:  MASNRLHELGLSHLALPSLNFVLLLVLMTLCSLLATYPLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVS
        M SNRLHELGL  LALPSLN  LL VLM L SLL T+                P+AISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY S
Subjt:  MASNRLHELGLSHLALPSLNFVLLLVLMTLCSLLATYPLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVS

Query:  DLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPL
        DLLA SGITDSNTASTPLD NVHLTPYDGVPLEDVSLYRQLVGSLIYLTVT PDIAY VHIVSQ MAAPRTIHFTVVLRILRY+KGTLGHGLQFSSQS L
Subjt:  DLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPL

Query:  ILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ
        +LSGYS+ADWAGDPTDR STT YCFYL DSLISWRSKKQSVVSRSSTESEY ALAD TAELLWLRWLLADMGVPQ
Subjt:  ILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ

XP_016899671.1 PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]8.9e-12694.76Show/hide
Query:  MTLCSLLATYPLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPY
        MTL SLLATYPLLLLYVDDMIITGNDPQAI DLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY SDLLA SGI DSNTASTPLDLNVHLTPY
Subjt:  MTLCSLLATYPLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPY

Query:  DGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYL
        DGVPLEDVSLYRQLVGSLIYLTVTHPDIAY VHIVSQ MAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQS L+LSGYS ADWAGDPTDRRSTTRYCFYL
Subjt:  DGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYL

Query:  CDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ
         D LISWRSKKQSVVSRSSTESEYHALADTTAELLWL WLLADMGVPQ
Subjt:  CDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ

TrEMBL top hitse value%identityAlignment
A0A1S4DUL1 uncharacterized mitochondrial protein AtMg00810-like4.3e-12694.76Show/hide
Query:  MTLCSLLATYPLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPY
        MTL SLLATYPLLLLYVDDMIITGNDPQAI DLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY SDLLA SGI DSNTASTPLDLNVHLTPY
Subjt:  MTLCSLLATYPLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPY

Query:  DGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYL
        DGVPLEDVSLYRQLVGSLIYLTVTHPDIAY VHIVSQ MAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQS L+LSGYS ADWAGDPTDRRSTTRYCFYL
Subjt:  DGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYL

Query:  CDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ
         D LISWRSKKQSVVSRSSTESEYHALADTTAELLWL WLLADMGVPQ
Subjt:  CDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ

A0A5A7UCC7 Retrovirus-related Pol polyprotein from transposon TNT 1-943.5e-12094.09Show/hide
Query:  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLY
        LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY SDLLA SGITDSNTASTPLD NVHLTPYDGVPLEDVSLY
Subjt:  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLY

Query:  RQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKK
        RQLVGSLIYLTVT PDIAYVVHIVSQ MAAPRTIHFTVVLRILRY+KGTLGHGLQFSSQS L+LSGYS+ADWAGDPTDR STT YCFYL DSLISWRSKK
Subjt:  RQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKK

Query:  QSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ
        QSVVSRSSTESEY ALAD TAELLWLRWLLADMGVPQ
Subjt:  QSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ

A0A5A7UJQ7 Putative mitochondrial protein7.9e-13694.8Show/hide
Query:  HELGLSHLALPSLNFVLLLVLMTLCSLLATYPLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASS
        HELGLSHLALPSLN VLLLVLMTL SLLATYPLLLLYVDDMIITGNDPQAI DLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY SDLLA S
Subjt:  HELGLSHLALPSLNFVLLLVLMTLCSLLATYPLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASS

Query:  GITDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYS
        GI DSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAY VHIVSQ MAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQS L+LSGYS
Subjt:  GITDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYS

Query:  HADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ
         ADWAGDPTDRRSTTRYCFYL D LISWRSKKQSVVSRSSTESEYHALADTTAELLWL WLLADMGVPQ
Subjt:  HADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ

A0A5A7V9Z8 Retrovirus-related Pol polyprotein from transposon TNT 1-942.7e-12094.51Show/hide
Query:  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLY
        LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY SDLLA SGITDSNTASTPLD NVHLTPYDGVPLE+VSLY
Subjt:  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLY

Query:  RQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKK
        RQLVGSLIYLTVT PDIAY VHIVSQ MAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQS L+LSGYS ADWAGDPTDRRSTT YCFYL DSLISWRSKK
Subjt:  RQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKK

Query:  QSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ
        QSVVSRSSTESEY ALADTTAELLWLRWLLADMGVPQ
Subjt:  QSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ

A0A5D3BLM4 Putative mitochondrial protein4.6e-12084.73Show/hide
Query:  MASNRLHELGLSHLALPSLNFVLLLVLMTLCSLLATYPLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVS
        M SNRLHELGL  LALPSLN  LL VLM L SLL T+                P+AISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKY S
Subjt:  MASNRLHELGLSHLALPSLNFVLLLVLMTLCSLLATYPLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVS

Query:  DLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPL
        DLLA SGITDSNTASTPLD NVHLTPYDGVPLEDVSLYRQLVGSLIYLTVT PDIAY VHIVSQ MAAPRTIHFTVVLRILRY+KGTLGHGLQFSSQS L
Subjt:  DLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPL

Query:  ILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ
        +LSGYS+ADWAGDPTDR STT YCFYL DSLISWRSKKQSVVSRSSTESEY ALAD TAELLWLRWLLADMGVPQ
Subjt:  ILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ

SwissProt top hitse value%identityAlignment
P04146 Copia protein3.2e-3336.1Show/hide
Query:  LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPL--DLNVHLTPYDGVPLEDVSL
        +LLYVDD++I   D   +++ + YL + F M DL  + +F+G+ +  + D   LSQ+ YV  +L+   + + N  STPL   +N  L   D    ED + 
Subjt:  LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPL--DLNVHLTPYDGVPLEDVSL

Query:  -YRQLVGSLIYLTV-THPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPL--ILSGYSHADWAGDPTDRRSTTRYCFYLCD-SLI
          R L+G L+Y+ + T PD+   V+I+S+  +   +  +  + R+LRY+KGT+   L F         + GY  +DWAG   DR+STT Y F + D +LI
Subjt:  -YRQLVGSLIYLTV-THPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPL--ILSGYSHADWAGDPTDRRSTTRYCFYLCD-SLI

Query:  SWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGV
         W +K+Q+ V+ SSTE+EY AL +   E LWL++LL  + +
Subjt:  SWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGV

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-948.9e-3639.84Show/hide
Query:  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEV--SRRSDGYLLSQAKYVSDLLASSGITDSNTASTP----LDLNVHLTPYDGVPL
        +LLLYVDDM+I G D   I+ L+  L + F+MKDLG     LG+++   R S    LSQ KY+  +L    + ++   STP    L L+  + P      
Subjt:  LLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEV--SRRSDGYLLSQAKYVSDLLASSGITDSNTASTP----LDLNVHLTPYDGVPL

Query:  EDVSL--YRQLVGSLIYLTV-THPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCD
         +++   Y   VGSL+Y  V T PDIA+ V +VS+ +  P   H+  V  ILRY++GT G  L F    P IL GY+ AD AGD  +R+S+T Y F    
Subjt:  EDVSL--YRQLVGSLIYLTV-THPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCD

Query:  SLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ
          ISW+SK Q  V+ S+TE+EY A  +T  E++WL+  L ++G+ Q
Subjt:  SLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ

P92519 Uncharacterized mitochondrial protein AtMg008102.3e-4745.09Show/hide
Query:  LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYR
        LLLYVDD+++TG+    ++ L   L   F MKDLG ++YFLG+++     G  LSQ KY   +L ++G+ D    STPL L ++ +        D S +R
Subjt:  LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYR

Query:  QLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQ
         +VG+L YLT+T PDI+Y V+IV Q M  P    F ++ R+LRY+KGT+ HGL     S L +  +  +DWAG  + RRSTT +C +L  ++ISW +K+Q
Subjt:  QLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQ

Query:  SVVSRSSTESEYHALADTTAELLW
          VSRSSTE+EY ALA T AEL W
Subjt:  SVVSRSSTESEYHALADTTAELLW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE19.2e-4944.87Show/hide
Query:  LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYR
        +L+YVDD++ITGNDP  + +    L Q F +KD   L+YFLG+E  R   G  LSQ +Y+ DLLA + +  +   +TP+  +  L+ Y G  L D + YR
Subjt:  LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYR

Query:  QLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQ
         +VGSL YL  T PDI+Y V+ +SQ M  P   H   + RILRY+ GT  HG+     + L L  YS ADWAGD  D  ST  Y  YL    ISW SKKQ
Subjt:  QLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQ

Query:  SVVSRSSTESEYHALADTTAELLWLRWLLADMGV
          V RSSTE+EY ++A+T++E+ W+  LL ++G+
Subjt:  SVVSRSSTESEYHALADTTAELLWLRWLLADMGV

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE26.6e-4743.59Show/hide
Query:  LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYR
        +L+YVDD++ITGND   +      L Q F +K+   L+YFLG+E  R   G  LSQ +Y  DLLA + +  +   +TP+  +  LT + G  L D + YR
Subjt:  LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYR

Query:  QLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQ
         +VGSL YL  T PD++Y V+ +SQ M  P   H+  + R+LRY+ GT  HG+     + L L  YS ADWAGD  D  ST  Y  YL    ISW SKKQ
Subjt:  QLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQ

Query:  SVVSRSSTESEYHALADTTAELLWLRWLLADMGV
          V RSSTE+EY ++A+T++EL W+  LL ++G+
Subjt:  SVVSRSSTESEYHALADTTAELLWLRWLLADMGV

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.7e-5043.4Show/hide
Query:  LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYR
        +L+YVDD+II  N+  A+ +L+  L   F+++DLG L YFLGLE++R + G  + Q KY  DLL  +G+     +S P+D +V  + + G    D   YR
Subjt:  LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYR

Query:  QLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQ
        +L+G L+YL +T  DI++ V+ +SQ   APR  H   V++IL YIKGT+G GL +SSQ+ + L  +S A +      RRST  YC +L  SLISW+SKKQ
Subjt:  QLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQ

Query:  SVVSRSSTESEYHALADTTAELLWLRWLLADMGVP
         VVS+SS E+EY AL+  T E++WL     ++ +P
Subjt:  SVVSRSSTESEYHALADTTAELLWLRWLLADMGVP

ATMG00240.1 Gag-Pol-related retrotransposon family protein7.5e-1443.04Show/hide
Query:  IYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYC
        +YLT+T PD+ + V+ +SQ  +A RT     V ++L Y+KGT+G GL +S+ S L L  ++ +DWA  P  RRS T +C
Subjt:  IYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYC

ATMG00810.1 DNA/RNA polymerases superfamily protein1.6e-4845.09Show/hide
Query:  LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYR
        LLLYVDD+++TG+    ++ L   L   F MKDLG ++YFLG+++     G  LSQ KY   +L ++G+ D    STPL L ++ +        D S +R
Subjt:  LLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITDSNTASTPLDLNVHLTPYDGVPLEDVSLYR

Query:  QLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQ
         +VG+L YLT+T PDI+Y V+IV Q M  P    F ++ R+LRY+KGT+ HGL     S L +  +  +DWAG  + RRSTT +C +L  ++ISW +K+Q
Subjt:  QLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRSTTRYCFYLCDSLISWRSKKQ

Query:  SVVSRSSTESEYHALADTTAELLW
          VSRSSTE+EY ALA T AEL W
Subjt:  SVVSRSSTESEYHALADTTAELLW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCAAACAGGCTCCACGAGCTTGGTTTGTCACATTTAGCTCTACCATCACTCAACTTTGTTTTACTTCTAGTCCTCATGACACTATGCTCTTTACTCGCCACATA
CCCCCTTCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACAGGCCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGACCTTG
GATCTCTCAACTACTTTCTTGGCCTTGAAGTCTCTCGACGCTCGGACGGGTATTTATTGTCTCAAGCTAAATATGTCTCTGATCTTTTAGCTAGCTCAGGAATCACTGAC
TCTAACACAGCTTCAACGCCGTTAGATCTCAATGTTCATTTGACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTCTGTATCGGCAACTCGTTGGCAGTCTCATCTA
TCTAACAGTGACTCACCCAGACATTGCATATGTTGTTCACATTGTTAGCCAACTAATGGCTGCTCCTCGAACCATTCATTTTACTGTTGTACTACGTATCCTTCGCTATA
TCAAGGGGACTTTGGGGCATGGACTTCAGTTTTCTTCTCAATCCCCTCTCATATTATCTGGCTATTCTCATGCAGATTGGGCTGGGGATCCCACTGATCGGCGTTCTACA
ACAAGATACTGCTTCTACTTATGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACTGAATCAGAATATCATGCTCTTGCTGATAC
TACTGCCGAACTTTTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCCCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCAAACAGGCTCCACGAGCTTGGTTTGTCACATTTAGCTCTACCATCACTCAACTTTGTTTTACTTCTAGTCCTCATGACACTATGCTCTTTACTCGCCACATA
CCCCCTTCTTCTTCTCTATGTTGATGACATGATTATCACTGGTAATGATCCACAGGCCATATCCGATCTCCAACATTACCTTGGTCAACATTTTGAAATGAAAGACCTTG
GATCTCTCAACTACTTTCTTGGCCTTGAAGTCTCTCGACGCTCGGACGGGTATTTATTGTCTCAAGCTAAATATGTCTCTGATCTTTTAGCTAGCTCAGGAATCACTGAC
TCTAACACAGCTTCAACGCCGTTAGATCTCAATGTTCATTTGACCCCTTATGATGGTGTTCCTCTTGAAGATGTCAGTCTGTATCGGCAACTCGTTGGCAGTCTCATCTA
TCTAACAGTGACTCACCCAGACATTGCATATGTTGTTCACATTGTTAGCCAACTAATGGCTGCTCCTCGAACCATTCATTTTACTGTTGTACTACGTATCCTTCGCTATA
TCAAGGGGACTTTGGGGCATGGACTTCAGTTTTCTTCTCAATCCCCTCTCATATTATCTGGCTATTCTCATGCAGATTGGGCTGGGGATCCCACTGATCGGCGTTCTACA
ACAAGATACTGCTTCTACTTATGCGATTCTCTCATTTCTTGGCGTAGTAAGAAACAAAGTGTTGTCTCTCGTTCTAGTACTGAATCAGAATATCATGCTCTTGCTGATAC
TACTGCCGAACTTTTATGGCTTCGTTGGCTTCTTGCTGATATGGGTGTTCCCCAGTAG
Protein sequenceShow/hide protein sequence
MASNRLHELGLSHLALPSLNFVLLLVLMTLCSLLATYPLLLLYVDDMIITGNDPQAISDLQHYLGQHFEMKDLGSLNYFLGLEVSRRSDGYLLSQAKYVSDLLASSGITD
SNTASTPLDLNVHLTPYDGVPLEDVSLYRQLVGSLIYLTVTHPDIAYVVHIVSQLMAAPRTIHFTVVLRILRYIKGTLGHGLQFSSQSPLILSGYSHADWAGDPTDRRST
TRYCFYLCDSLISWRSKKQSVVSRSSTESEYHALADTTAELLWLRWLLADMGVPQ