; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0111501 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0111501
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag protease polyprotein
Genome locationCMiso1.1chr04:30565192..30576248
RNA-Seq ExpressionCmc04g0111501
SyntenyCmc04g0111501
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016020 - membrane (cellular component)
GO:0043227 - membrane-bounded organelle (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR005162 - Retrotransposon gag domain
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039053.1 gag protease polyprotein [Cucumis melo var. makuwa]3.2e-22098.5Show/hide
Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAK
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDP A VTHADLAAMEQRFRDLIMQMREQQKPASP PAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAK
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAK

Query:  HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEF
        HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEF
Subjt:  HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEF

Query:  LNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPMP
        LNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVP+P
Subjt:  LNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPMP

Query:  QRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG
        QR+FRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFG RTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG
Subjt:  QRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG

KAA0040689.1 pol protein [Cucumis melo var. makuwa]9.4e-22098.5Show/hide
Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAK
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAA VTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAP PAPA APVPVAPQFVPDQLSAEAK
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAK

Query:  HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEF
        HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEF
Subjt:  HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEF

Query:  LNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPMP
        LNL+QGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVP+P
Subjt:  LNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPMP

Query:  QRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG
        QRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQ AGAPHQGRVFATNKTEAEKAGTVVTG
Subjt:  QRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG

KAA0043391.1 pol protein [Cucumis melo var. makuwa]2.1e-21997.77Show/hide
Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPT----PAPAPAPAPAPAPAPVPVAPQFVPDQLS
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAA VTHADLAAMEQRFRDLIMQMREQQKPASPT    PAPAPAPAPAPAPAPVPVAPQFVPDQLS
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPT----PAPAPAPAPAPAPAPVPVAPQFVPDQLS

Query:  AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
        AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Subjt:  AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK

Query:  RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
        RQEFLN+EQG+MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQP
Subjt:  RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP

Query:  VPMPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTV
        VP+PQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTV
Subjt:  VPMPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTV

Query:  VTG
        VTG
Subjt:  VTG

KAA0048687.1 pol protein [Cucumis melo var. makuwa]1.8e-21897.77Show/hide
Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAP----APVPVAPQFVPDQLS
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAA VTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAP    APVPVAPQFVPDQLS
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAP----APVPVAPQFVPDQLS

Query:  AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
        AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Subjt:  AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK

Query:  RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
        RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQP
Subjt:  RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP

Query:  VPMPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTV
        VP+PQRNFRSGGEFRRFQQKPFEAGEAAR KPLCT CGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTV
Subjt:  VPMPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTV

Query:  VTG
        VTG
Subjt:  VTG

KAA0062112.1 pol protein [Cucumis melo var. makuwa]4.7e-21997.52Show/hide
Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPA----PAPAPVPVAPQFVPDQLS
        MPPRRGARRGGRGGRG+GAGRVQPEVQPVAQAP+PAA VTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPA    PAPAPVPVAPQF+PDQLS
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPA----PAPAPVPVAPQFVPDQLS

Query:  AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
        AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Subjt:  AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK

Query:  RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
        RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKT GRGSTSGQKRKAEQQP
Subjt:  RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP

Query:  VPMPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTV
        VP+PQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTV
Subjt:  VPMPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTV

Query:  VTG
        VTG
Subjt:  VTG

TrEMBL top hitse value%identityAlignment
A0A5A7T7V8 Gag protease polyprotein1.6e-22098.5Show/hide
Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAK
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDP A VTHADLAAMEQRFRDLIMQMREQQKPASP PAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAK
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAK

Query:  HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEF
        HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEF
Subjt:  HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEF

Query:  LNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPMP
        LNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVP+P
Subjt:  LNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPMP

Query:  QRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG
        QR+FRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFG RTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG
Subjt:  QRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG

A0A5A7THE6 Reverse transcriptase4.5e-22098.5Show/hide
Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAK
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAA VTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAP PAPA APVPVAPQFVPDQLSAEAK
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAK

Query:  HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEF
        HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEF
Subjt:  HLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEF

Query:  LNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPMP
        LNL+QGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVP+P
Subjt:  LNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPMP

Query:  QRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG
        QRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQ AGAPHQGRVFATNKTEAEKAGTVVTG
Subjt:  QRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTG

A0A5A7TP96 Reverse transcriptase1.0e-21997.77Show/hide
Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPT----PAPAPAPAPAPAPAPVPVAPQFVPDQLS
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAA VTHADLAAMEQRFRDLIMQMREQQKPASPT    PAPAPAPAPAPAPAPVPVAPQFVPDQLS
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPT----PAPAPAPAPAPAPAPVPVAPQFVPDQLS

Query:  AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
        AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Subjt:  AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK

Query:  RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
        RQEFLN+EQG+MTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQP
Subjt:  RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP

Query:  VPMPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTV
        VP+PQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTV
Subjt:  VPMPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTV

Query:  VTG
        VTG
Subjt:  VTG

A0A5A7U330 Reverse transcriptase8.6e-21997.77Show/hide
Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAP----APVPVAPQFVPDQLS
        MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAA VTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAP    APVPVAPQFVPDQLS
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAP----APVPVAPQFVPDQLS

Query:  AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
        AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Subjt:  AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK

Query:  RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
        RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRG TSGQKRKAEQQP
Subjt:  RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP

Query:  VPMPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTV
        VP+PQRNFRSGGEFRRFQQKPFEAGEAAR KPLCT CGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTV
Subjt:  VPMPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTV

Query:  VTG
        VTG
Subjt:  VTG

A0A5A7V1N3 Reverse transcriptase2.3e-21997.52Show/hide
Query:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPA----PAPAPVPVAPQFVPDQLS
        MPPRRGARRGGRGGRG+GAGRVQPEVQPVAQAP+PAA VTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPA    PAPAPVPVAPQF+PDQLS
Subjt:  MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPA----PAPAPVPVAPQFVPDQLS

Query:  AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
        AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK
Subjt:  AEAKHLRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAK

Query:  RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP
        RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKT GRGSTSGQKRKAEQQP
Subjt:  RQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQP

Query:  VPMPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTV
        VP+PQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTV
Subjt:  VPMPQRNFRSGGEFRRFQQKPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTV

Query:  VTG
        VTG
Subjt:  VTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCCAAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCG
GCTGCGCTAGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTCAGAGATTTGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCG
CCAGCTCCAGCACCAGCTCCTGCTCCAGCTCCGGCTCCAGTACCAGTTGCGCCCCAGTTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAGCACCTGAGGGATTTC
AGGAAGTATAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGATGTGGTTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCT
GAGGATCAGAAAGTTCAGTGTGCTGTTTTTATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGAATGCTAGGTGGTGATGTGAGTCAGATCACG
TGGCAGCAGTTTAAGGAGAGTTTCTATGCGAAATTCTTCTCCGCTAGTTTGAGAGACGCCAAGCGGCAGGAGTTCCTGAACTTAGAGCAGGGTGACATGACAGTG
GAGCAGTATGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTTCGACTGGAC
ATTCAGGGTTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCTAAGACCGCT
GGTAGAGGTTCGACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAATGCCACAGCGAAATTTCAGATCAGGTGGTGAATTTCGCCGCTTCCAGCAG
AAACCTTTTGAGGCAGGGGAGGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGGAAGCATCATCTGGGCCGTTGCTTGTTCGGGACCAGGACTTGCTTTAAG
TGTAGGCAAGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTTACGGGGAACGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACC
AACAAGACTGAGGCTGAGAAGGCAGGCACGGTAGTGACAGGTAAGGGCACAGCGAGGGGCAGACCGACGAGAGGCAGGAAGGACGCGTGA
mRNA sequenceShow/hide mRNA sequence
TTTGAATATTTAGTTTGAATTTTTATATGTTGTTCTCAGTGGACGACTGTTACTCGAGACGACTTCTCTTGTTGAGTATCAATAAAGATTTTTTTCCTCGAGTAT
AATTTATATTTTTGTAAGAATATTCTCTAAGTTTGTAATTAGTTGTTGGGCGAAAATGTTATGATAAAAGCCATGGTCCGCTTGGTTATCAAAATTTATACGCTA
TCACCTCCATTTTTCTTGCGCTTCAGAGGGAGAGAGAGAAAAAAATGGGAAGTTTTCTTTCAGTTTGTTCGGCCCCTCCTCGCCCACCGCCGAAGCTGCCTCATC
GGAGCCGTCGTCGGTTAAGGAGTGCGGCTTGATGGAAACTCCTCTTCAATTCCCTTCAGGAAACTTCCAAGCTCATGGTGATTGATTTCTCCGCAACTTAGTGTG
GACCCTGTAAGCTCATGGAGCCAGCCTTCAACGCCATGGCTGAAAAATACACCGATGTTGAGTTCGCTAGAATCGATGTCCGACGAGATAGCTGGAAATGCCGCC
AAGGAGAGGTGCACGTAGGGGTGGCCGAGGAGGCCGAGGAAGGGGAGCAGGACGCGTTCAGCCTGAGGTGCAGCCTGTAGCCCAAGCCCCTGACCCGGCTGCGCT
AGTTACTCATGCGGACCTAGCCGCCATGGAGCAGAGGTTCAGAGATTTGATTATGCAGATGCGGGAGCAGCAGAAGCCTGCCTCGCCAACTCCGGCGCCAGCTCC
AGCACCAGCTCCTGCTCCAGCTCCGGCTCCAGTACCAGTTGCGCCCCAGTTTGTGCCGGATCAGTTGTCAGCAGAGGCTAAGCACCTGAGGGATTTCAGGAAGTA
TAATCCCACGACGTTCGATGGGTCTTTGGAGGACCCCACCAGGGCTCAGATGTGGTTATCGTCCTTGGAGACCATATTCCGTTACATGAAATGCCCTGAGGATCA
GAAAGTTCAGTGTGCTGTTTTTATGTTGACTGACAGAGGTACTGCATGGTGGGAGACTACAGAGAGAATGCTAGGTGGTGATGTGAGTCAGATCACGTGGCAGCA
GTTTAAGGAGAGTTTCTATGCGAAATTCTTCTCCGCTAGTTTGAGAGACGCCAAGCGGCAGGAGTTCCTGAACTTAGAGCAGGGTGACATGACAGTGGAGCAGTA
TGATGCGGAGTTTGACATGTTATCCCGCTTCGCTCCCGAGATGATAGCGACCGAGGCGGCCAGAGCTGATAAGTTTGTTAGAGGCCTTCGACTGGACATTCAGGG
TTTGGTCCGAGCTTTCAGACCCGCTACTCATGCCGATGCACTGCGCCTGGCAGTGGATCTCAGTTTACAGGAGAGGGCTAACTCGTCTAAGACCGCTGGTAGAGG
TTCGACATCGGGACAGAAGAGGAAGGCTGAGCAGCAGCCTGTTCCAATGCCACAGCGAAATTTCAGATCAGGTGGTGAATTTCGCCGCTTCCAGCAGAAACCTTT
TGAGGCAGGGGAGGCTGCCAGAGGGAAGCCGTTGTGTACCACTTGTGGGAAGCATCATCTGGGCCGTTGCTTGTTCGGGACCAGGACTTGCTTTAAGTGTAGGCA
AGAGGGTCATACAGCTGATAGATGCCCGTTGAGACTTACGGGGAACGCGCAGAATCAGGGAGCAGGTGCTCCACATCAGGGTAGAGTCTTTGCTACCAACAAGAC
TGAGGCTGAGAAGGCAGGCACGGTAGTGACAGGTAAGGGCACAGCGAGGGGCAGACCGACGAGAGGCAGGAAGGACGCGTGAAGGCCATATGGACGCGTCTGGCT
TTTCTTATCGCTTCCGCTATGTATTTTGTCAGAATATTTGACTTGTGATTTTGAACTGATGACTTGAGTTTTTATTTGAGACTTTTTATGATTGATTTAAAATAG
GGCCCGAAAATGTCTTTTTGTAAGGTTTCTAATGCTTTAATGAATCGTAACTG
Protein sequenceShow/hide protein sequence
MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAALVTHADLAAMEQRFRDLIMQMREQQKPASPTPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDF
RKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTV
EQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPMPQRNFRSGGEFRRFQQ
KPFEAGEAARGKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGNAQNQGAGAPHQGRVFATNKTEAEKAGTVVTGKGTARGRPTRGRKDA