; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0113541 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0113541
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTFIIS N-terminal domain-containing protein
Genome locationCMiso1.1chr04:32037832..32042103
RNA-Seq ExpressionCmc04g0113541
SyntenyCmc04g0113541
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003617 - Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
IPR017923 - Transcription factor IIS, N-terminal
IPR035441 - TFIIS/LEDGF domain superfamily
IPR044805 - Mediator of RNA polymerase II transcription subunit 26a/b-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596180.1 putative mediator of RNA polymerase II transcription subunit 26b, partial [Cucurbita argyrosperma subsp. sororia]4.4e-20785.78Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKES
        M+AKSGSLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGD+D GETGFKSD AGDG  FE GGSKES
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKES

Query:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHL
        KVYSSRDD GEMN N+VSN+SFGEAEALTDEIEQ+S+IVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVD LQATEIGKAVN LRKHGSKRIRHL
Subjt:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHL

Query:  ARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSN
         R LI EWK+MVD+WV+ATAAV G+EVTPDSKS  A+ +EEDDY E+GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSG+FVK R+N RKTS+
Subjt:  ARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSN

Query:  GNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKL
        G+QNP RC QQTTREVNV++K+NK+QMKEQVVKP NKP SN NSG  R QK ST QKDNHEK QRK+EKPTIPKR+ QD FKCSDEVAVQVKLEATKRKL
Subjt:  GNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKL

Query:  QESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR
        QESYQQAENAKKQRTIQVMELHD+PKQG+GHRN HLKSGG NRHWTNGRR
Subjt:  QESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR

XP_004136624.1 probable mediator of RNA polymerase II transcription subunit 26b [Cucumis sativus]9.5e-24297.35Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG  GETGFKSDF  DGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESD VLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR

Query:  HLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKT
        HLARVLIMEWK+MVD+WVQATAAVQGAEVTPDSK+KSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVK RNNVRKT
Subjt:  HLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKT

Query:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
        SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLR QKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
Subjt:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR
        KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNR+W NGRR
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR

XP_008443218.1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Cucumis melo]5.7e-24799.34Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG  GETGFKSDFAGDGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR

Query:  HLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKT
        HLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVK RNNVRKT
Subjt:  HLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKT

Query:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
        SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
Subjt:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR
        KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR

XP_038904902.1 probable mediator of RNA polymerase II transcription subunit 26b isoform X1 [Benincasa hispida]2.4e-22993.6Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG  GETGFKSDFAGDGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVDTLQATEIGKAVN LRKHGSK IR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR

Query:  HLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDY-EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRK
        HLARVLIMEWK+MVD WV+ATAAVQGAEVTPDSK+KSA+VKEED+Y EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVK RNNVRK
Subjt:  HLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDY-EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRK

Query:  TSNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATK
        TSNGNQNP R NQQT  EVNVL+KEN TQMKEQVVKP N+PSSNTNSGLLR QKLSTEQKDNHEKFQRKL+KPTIPKRNQQ N+KCSDEVAVQVKLEATK
Subjt:  TSNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATK

Query:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR
        RKLQESYQQAENAKKQRTIQVMELHDLPKQG+GHRNPHLKSGG+NR+W NGRR
Subjt:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR

XP_038904903.1 probable mediator of RNA polymerase II transcription subunit 26b isoform X2 [Benincasa hispida]1.1e-22693.16Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG  GETGFKSDFAGDGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVDTLQATEIGKAVN LRKHGSK IR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR

Query:  HLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDY-EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRK
        HLARVLIMEWK+MVD WV+ATAAVQ  EVTPDSK+KSA+VKEED+Y EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVK RNNVRK
Subjt:  HLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDY-EEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRK

Query:  TSNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATK
        TSNGNQNP R NQQT  EVNVL+KEN TQMKEQVVKP N+PSSNTNSGLLR QKLSTEQKDNHEKFQRKL+KPTIPKRNQQ N+KCSDEVAVQVKLEATK
Subjt:  TSNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATK

Query:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR
        RKLQESYQQAENAKKQRTIQVMELHDLPKQG+GHRNPHLKSGG+NR+W NGRR
Subjt:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR

TrEMBL top hitse value%identityAlignment
A0A0A0LBK9 TFIIS N-terminal domain-containing protein4.6e-24297.35Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG  GETGFKSDF  DGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESD VLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR

Query:  HLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKT
        HLARVLIMEWK+MVD+WVQATAAVQGAEVTPDSK+KSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVK RNNVRKT
Subjt:  HLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKT

Query:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
        SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLR QKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
Subjt:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR
        KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNR+W NGRR
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR

A0A1S3B7K4 probable mediator of RNA polymerase II transcription subunit 26b2.8e-24799.34Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG  GETGFKSDFAGDGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR

Query:  HLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKT
        HLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVK RNNVRKT
Subjt:  HLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKT

Query:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
        SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
Subjt:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR
        KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR

A0A5A7UDQ2 Putative mediator of RNA polymerase II transcription subunit 26b2.8e-24799.34Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSK
        MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG  GETGFKSDFAGDGCEFEAGGSK
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFEAGGSK

Query:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
        ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR
Subjt:  ESKVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIR

Query:  HLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKT
        HLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVK RNNVRKT
Subjt:  HLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKT

Query:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
        SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR
Subjt:  SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKR

Query:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR
        KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR
Subjt:  KLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR

A0A6J1FCK1 probable mediator of RNA polymerase II transcription subunit 26b2.8e-20785.78Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKES
        M+AKSGSLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGD+D GETGFKSD AGDG  FE GGSKES
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKES

Query:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHL
        KVYSSRDD GEMN N+VSN+SFGEAEALTDEIEQES+IVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVD LQATEIGKAVN LRKHGSKRIRHL
Subjt:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHL

Query:  ARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSN
         R LI EWK+MVD+WV+ATAAV G+EVTPDSKS   + +EEDDY E+GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSG+FVK R+N RKTS+
Subjt:  ARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSN

Query:  GNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKL
        G+QNP RC QQTTREVNV++K+NK+QMKEQVVKP NKP SN NSG  R QK ST QKDNHEK QRK+EKPTIPKR+ QD FKCSDEVAVQVKLEATKRKL
Subjt:  GNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKL

Query:  QESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR
        QESYQQAENAKKQRTIQVMELHD+PKQG+GHRN HLKSGG NRHWTNGRR
Subjt:  QESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR

A0A6J1I7W1 probable mediator of RNA polymerase II transcription subunit 26b3.1e-20685.31Show/hide
Query:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKES
        M+AKSGSLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGD+D  ETGFKSD AGDG  FE GGSKES
Subjt:  MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKES

Query:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHL
        KVYSSRDD GEMN N+VSN+SFGEAEALTDEIEQES+IVGEVLRIKEILNNFE+ESDSVLFESLRRLELMALSVD LQATEIGKAVN LRKHGSKRIRHL
Subjt:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHL

Query:  ARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSN
         R LI EWK+MVD+WV+ATAAV G+EVTPDSKS  A+ +EEDDY E+GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSG+FVK R+N RKTSN
Subjt:  ARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSN

Query:  GNQNPTRCNQQTTREVNVL------SKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLE
        G+QNP RC QQTTREVNV+      SK+NK+QMKEQVVKP NKP SN NSGL R QK ST QKDNHEK QRK+EKPTIPKR+ QD FKCSDEVAVQVKLE
Subjt:  GNQNPTRCNQQTTREVNVL------SKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLE

Query:  ATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR
        ATKRKLQESYQQAENAKKQRTIQVMELHD+PKQG+GHRN HLKSGG NRHWTNGRR
Subjt:  ATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR

SwissProt top hitse value%identityAlignment
F4J4Y5 Probable mediator of RNA polymerase II transcription subunit 26a3.3e-6442.28Show/hide
Query:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKESKVYS
        S SLD+WR YFR  +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD +EL++AGD    E        G G     GG +      
Subjt:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKESKVYS

Query:  SRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVL
                          G++   T E E+ S  V EV+RI++IL+N +DE DSVL ESLR+LE M++SVD L+ TEIGKAVN LR+H S +I  LA+ L
Subjt:  SRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVL

Query:  IMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSNGNQN
          EWK +VD W+     + G E TP+S + S         EEE  PSPP D    +  +P   ELSQ  D +D DGNPR+S   V+ ++  +  S+  + 
Subjt:  IMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSNGNQN

Query:  PTRCNQQTTREVNVLSK---ENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRN----QQDNFKCSDEVAVQVKLEATK
        P     + T + NV+ +   + +T+ +E  V+P  K S+       RQ K S EQ  +    QRK    T  KR     QQD  K  D      K E  K
Subjt:  PTRCNQQTTREVNVLSK---ENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRN----QQDNFKCSDEVAVQVKLEATK

Query:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRH
        RKLQESY Q ENAK+QRTIQV+E   +PKQ    + P LK     R+
Subjt:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRH

F4KFC7 Probable mediator of RNA polymerase II transcription subunit 26c4.9e-2327.52Show/hide
Query:  LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD-----RVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKESK
        LD +R+   NA  D++  ID AILVA+ D  +E + RRD I E+L++  +  +C  CD      V  A  G ++ G    +++             +E  
Subjt:  LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD-----RVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKESK

Query:  VYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLA
          ++ +++ E + N   +  F     L D+ EQ+S     ++ IKE L +  D S+  L E L+ LE M ++   LQ T+IG+ VN +RKH S  +R LA
Subjt:  VYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLA

Query:  RVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSNG
        + L+ +WK+ VD WV+     Q  ++ P S      + +ED   ++ L +    +   F   P                 P+N             +S+ 
Subjt:  RVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSNG

Query:  NQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQ
        N N T                 + + K + V P  +  S + +                        KP+ P  +QQ   +  D+   +V  +  +++LQ
Subjt:  NQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQ

Query:  ESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFN---RHW
        ++Y+QAENAKKQRTIQVM++HD+PK   G   P  + GG +   RHW
Subjt:  ESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFN---RHW

Q9FHK9 Probable mediator of RNA polymerase II transcription subunit 26b5.6e-8849.14Show/hide
Query:  SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFE-AGGSKES
        SGSLDSWR YF R  +SDIFGIID+AI+VAA+DCP +F+ RRD+IAE LFSCR+ RC+GCD +EL+V GD +   G TG          ++E AGGSKES
Subjt:  SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFE-AGGSKES

Query:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHL
        K  SSR D    N   VSN++F EAEAL+DEIE+ S +  EV RIKEIL N EDE +SVL +SLR L+LM+L+VD L++TEIGKAVN LRKH S +IR L
Subjt:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHL

Query:  ARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSN
        A+ LI EWK++VD WV  T  + GAE TP+S + S         EEE  PS P D    FT +P   E+S FFD +D DGNPRNS +    R + R+  N
Subjt:  ARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSN

Query:  GNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNN-KPSSNTN-SGLLRQQKLSTEQKDNHEKFQ-RKLEKPTIPKR------------NQQDNFKCSD
          +                 K   TQM+ Q     + KPSS T+  G  R  K STEQ+  +E     K EKP I ++             QQ+  K  D
Subjt:  GNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNN-KPSSNTN-SGLLRQQKLSTEQKDNHEKFQ-RKLEKPTIPKR------------NQQDNFKCSD

Query:  EVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGF-NRHWTNGRR
              K E  KRKLQESYQ  ENAKKQRTIQV+E+  +PKQG   + P LK  G  NR+W NGR+
Subjt:  EVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGF-NRHWTNGRR

Arabidopsis top hitse value%identityAlignment
AT3G10820.1 Transcription elongation factor (TFIIS) family protein6.7e-5246.07Show/hide
Query:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKESKVYS
        S SLD+WR YFR  +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD +EL++AGD    E        G G     GG +      
Subjt:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKESKVYS

Query:  SRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVL
                          G++   T E E+ S  V EV+RI++IL+N +DE DSVL ESLR+LE M++SVD L+ TEIGKAVN LR+H S +I  LA+ L
Subjt:  SRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVL

Query:  IMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ
          EWK +VD W+     + G E TP+S + S         EEE  PSPP D    +  +P   ELSQ
Subjt:  IMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQ

AT3G10820.2 Transcription elongation factor (TFIIS) family protein2.4e-6542.28Show/hide
Query:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKESKVYS
        S SLD+WR YFR  +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD +EL++AGD    E        G G     GG +      
Subjt:  SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKESKVYS

Query:  SRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVL
                          G++   T E E+ S  V EV+RI++IL+N +DE DSVL ESLR+LE M++SVD L+ TEIGKAVN LR+H S +I  LA+ L
Subjt:  SRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVL

Query:  IMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSNGNQN
          EWK +VD W+     + G E TP+S + S         EEE  PSPP D    +  +P   ELSQ  D +D DGNPR+S   V+ ++  +  S+  + 
Subjt:  IMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSNGNQN

Query:  PTRCNQQTTREVNVLSK---ENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRN----QQDNFKCSDEVAVQVKLEATK
        P     + T + NV+ +   + +T+ +E  V+P  K S+       RQ K S EQ  +    QRK    T  KR     QQD  K  D      K E  K
Subjt:  PTRCNQQTTREVNVLSK---ENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRN----QQDNFKCSDEVAVQVKLEATK

Query:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRH
        RKLQESY Q ENAK+QRTIQV+E   +PKQ    + P LK     R+
Subjt:  RKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFNRH

AT5G05140.1 Transcription elongation factor (TFIIS) family protein4.0e-8949.14Show/hide
Query:  SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFE-AGGSKES
        SGSLDSWR YF R  +SDIFGIID+AI+VAA+DCP +F+ RRD+IAE LFSCR+ RC+GCD +EL+V GD +   G TG          ++E AGGSKES
Subjt:  SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDG--GETGFKSDFAGDGCEFE-AGGSKES

Query:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHL
        K  SSR D    N   VSN++F EAEAL+DEIE+ S +  EV RIKEIL N EDE +SVL +SLR L+LM+L+VD L++TEIGKAVN LRKH S +IR L
Subjt:  KVYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHL

Query:  ARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSN
        A+ LI EWK++VD WV  T  + GAE TP+S + S         EEE  PS P D    FT +P   E+S FFD +D DGNPRNS +    R + R+  N
Subjt:  ARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSN

Query:  GNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNN-KPSSNTN-SGLLRQQKLSTEQKDNHEKFQ-RKLEKPTIPKR------------NQQDNFKCSD
          +                 K   TQM+ Q     + KPSS T+  G  R  K STEQ+  +E     K EKP I ++             QQ+  K  D
Subjt:  GNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNN-KPSSNTN-SGLLRQQKLSTEQKDNHEKFQ-RKLEKPTIPKR------------NQQDNFKCSD

Query:  EVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGF-NRHWTNGRR
              K E  KRKLQESYQ  ENAKKQRTIQV+E+  +PKQG   + P LK  G  NR+W NGR+
Subjt:  EVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGF-NRHWTNGRR

AT5G09850.1 Transcription elongation factor (TFIIS) family protein3.5e-2427.52Show/hide
Query:  LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD-----RVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKESK
        LD +R+   NA  D++  ID AILVA+ D  +E + RRD I E+L++  +  +C  CD      V  A  G ++ G    +++             +E  
Subjt:  LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD-----RVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKESK

Query:  VYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLA
          ++ +++ E + N   +  F     L D+ EQ+S     ++ IKE L +  D S+  L E L+ LE M ++   LQ T+IG+ VN +RKH S  +R LA
Subjt:  VYSSRDDIGEMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLA

Query:  RVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSNG
        + L+ +WK+ VD WV+     Q  ++ P S      + +ED   ++ L +    +   F   P                 P+N             +S+ 
Subjt:  RVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSNG

Query:  NQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQ
        N N T                 + + K + V P  +  S + +                        KP+ P  +QQ   +  D+   +V  +  +++LQ
Subjt:  NQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQ

Query:  ESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFN---RHW
        ++Y+QAENAKKQRTIQVM++HD+PK   G   P  + GG +   RHW
Subjt:  ESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGFN---RHW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCAAGTCTGGGTCCCTTGATTCCTGGAGGAATTACTTCCGGAATGCGAATTCGGATATTTTTGGTATTATCGATTACGCAATTTTGGTGGCGGCTTCCGATTG
TCCTAAGGAGTTCAGGTTGAGGAGAGATCGAATTGCAGAGCAGTTGTTCTCTTGCCGATTGACTCGTTGTTTGGGCTGTGACCGAGTGGAGCTGGCGGTGGCCGGAGACA
TCGACGGAGGTGAAACGGGTTTCAAGAGCGATTTCGCCGGAGATGGGTGTGAGTTTGAGGCTGGTGGGAGCAAAGAGAGCAAGGTTTATAGTAGTAGAGATGATATAGGG
GAGATGAATTGCAACCGGGTTAGTAATTTTAGCTTTGGTGAAGCTGAAGCATTGACTGATGAAATTGAGCAAGAATCTCAGATTGTAGGAGAGGTTTTGAGGATCAAAGA
GATTCTTAATAATTTTGAAGATGAGTCTGATTCGGTGTTGTTTGAATCACTTAGAAGACTTGAATTGATGGCTCTATCAGTTGATACTTTGCAGGCAACTGAGATTGGCA
AAGCTGTTAATTGTCTTCGAAAGCATGGATCAAAGCGCATCCGCCATCTTGCTCGAGTTCTTATCATGGAGTGGAAAGACATGGTGGACGTGTGGGTACAAGCTACAGCT
GCTGTTCAAGGTGCAGAGGTCACACCGGATTCCAAAAGCAAGTCTGCTGCGGTAAAAGAAGAAGATGATTATGAAGAAGAAGGCCTTCCCTCGCCTCCTTTAGATGAAGC
TGCATTTTTTACCACTCAGCCCACATCTATGGAGCTCTCACAATTCTTTGATGGCATGGACGATGATGGAAATCCTCGAAATAGTGGGGACTTCGTCAAGTACCGCAATA
ATGTGAGAAAAACTTCAAATGGCAATCAAAACCCTACAAGGTGTAACCAACAAACCACTCGAGAGGTTAATGTGCTTTCTAAGGAAAATAAGACTCAAATGAAGGAACAA
GTTGTGAAGCCAAATAATAAGCCATCCTCAAACACAAATTCTGGGCTTTTGAGGCAACAGAAGCTAAGCACAGAACAGAAGGACAACCATGAGAAGTTCCAGCGCAAATT
GGAAAAACCTACAATCCCAAAGAGGAATCAGCAAGATAACTTCAAGTGCTCGGATGAGGTTGCAGTTCAAGTGAAGCTAGAAGCTACAAAAAGGAAACTCCAAGAGAGTT
ACCAACAAGCTGAAAACGCCAAGAAGCAGCGTACAATACAGGTTATGGAATTACACGATCTTCCCAAGCAAGGAATTGGCCATAGAAATCCACACCTAAAATCTGGAGGC
TTCAACCGGCATTGGACAAATGGGCGGCGTTAG
mRNA sequenceShow/hide mRNA sequence
TTTTGTTTTATGGATTTGGTGCCAAGAAAGAAAGAAAGAAAACATATTTTTGTGAATATTGAAGGGAAGGAGTTTTTGGGTTTTTGGTTATGTGTACTCCAAATTCTGTG
CCCTTTTTGGAGCACCCAGTTTTGATTCTAATCTCTTTAAAAAATTTCTAGAGAGAGAGAGAAAACCAACCAAACAAACAACAAAAACCCATTTCCATTTCTAAATCCAT
TCTTCCATTGAAAAAGAAAAGAGAGATTGAATTGAAAGATTGAATTCTTTGTTCTTATTTTCTCTTCTCTTTCCTTTTTCTCTTCTCTTTCCATTTCCCATATTCCCGAT
ATTTCTTCTCCACAGCAAATCCCGGAGCTTTTCCGGGATTGAAGAGAAGCAACCAAGTTAATTTCTCTGTTACTACTACCCCTTTTTCAATTTTTTAGAACAATCCCACA
AACCATAGCTTGGGTTTTGATCAATATCCTGTTTTGTTCTTGATCAGATCCTTAATTTTCATAAAAAGAAGGAACGAAATCGAGCACCAATACTTACTCTACACACATTA
ACCAACTCGTTTTTTGTGTTTAAACGGATGAAACTCCGACTGTTAATGGGTTTGTTGCTAACGATTTTTTCTGGGAATCGGATTCTTGTGGTGCTGGATTAGTGTTAGAT
AAGGCGGGCTTTTCTGTTTTGGGTGTTGGTTTCTTTCAAAACCCATCTTCAATCAACTGGGTTGAACCCCAATTGCTTGCGTTTTCTTCATATTTAGGTTTTTGTTTTCT
CACGGCGATGGAATTCCCACTTCGATTCTGAGTATTTCGTTGGAATTTCATCTGGGTTTGATCAAAGGTTAGTTTCTCCAGATTCCGATCATGGCTGCCAAGTCTGGGTC
CCTTGATTCCTGGAGGAATTACTTCCGGAATGCGAATTCGGATATTTTTGGTATTATCGATTACGCAATTTTGGTGGCGGCTTCCGATTGTCCTAAGGAGTTCAGGTTGA
GGAGAGATCGAATTGCAGAGCAGTTGTTCTCTTGCCGATTGACTCGTTGTTTGGGCTGTGACCGAGTGGAGCTGGCGGTGGCCGGAGACATCGACGGAGGTGAAACGGGT
TTCAAGAGCGATTTCGCCGGAGATGGGTGTGAGTTTGAGGCTGGTGGGAGCAAAGAGAGCAAGGTTTATAGTAGTAGAGATGATATAGGGGAGATGAATTGCAACCGGGT
TAGTAATTTTAGCTTTGGTGAAGCTGAAGCATTGACTGATGAAATTGAGCAAGAATCTCAGATTGTAGGAGAGGTTTTGAGGATCAAAGAGATTCTTAATAATTTTGAAG
ATGAGTCTGATTCGGTGTTGTTTGAATCACTTAGAAGACTTGAATTGATGGCTCTATCAGTTGATACTTTGCAGGCAACTGAGATTGGCAAAGCTGTTAATTGTCTTCGA
AAGCATGGATCAAAGCGCATCCGCCATCTTGCTCGAGTTCTTATCATGGAGTGGAAAGACATGGTGGACGTGTGGGTACAAGCTACAGCTGCTGTTCAAGGTGCAGAGGT
CACACCGGATTCCAAAAGCAAGTCTGCTGCGGTAAAAGAAGAAGATGATTATGAAGAAGAAGGCCTTCCCTCGCCTCCTTTAGATGAAGCTGCATTTTTTACCACTCAGC
CCACATCTATGGAGCTCTCACAATTCTTTGATGGCATGGACGATGATGGAAATCCTCGAAATAGTGGGGACTTCGTCAAGTACCGCAATAATGTGAGAAAAACTTCAAAT
GGCAATCAAAACCCTACAAGGTGTAACCAACAAACCACTCGAGAGGTTAATGTGCTTTCTAAGGAAAATAAGACTCAAATGAAGGAACAAGTTGTGAAGCCAAATAATAA
GCCATCCTCAAACACAAATTCTGGGCTTTTGAGGCAACAGAAGCTAAGCACAGAACAGAAGGACAACCATGAGAAGTTCCAGCGCAAATTGGAAAAACCTACAATCCCAA
AGAGGAATCAGCAAGATAACTTCAAGTGCTCGGATGAGGTTGCAGTTCAAGTGAAGCTAGAAGCTACAAAAAGGAAACTCCAAGAGAGTTACCAACAAGCTGAAAACGCC
AAGAAGCAGCGTACAATACAGGTTATGGAATTACACGATCTTCCCAAGCAAGGAATTGGCCATAGAAATCCACACCTAAAATCTGGAGGCTTCAACCGGCATTGGACAAA
TGGGCGGCGTTAGGATCGTCAATGTAATAAGGTAGAAGACTAATGCTTCCAGCATTACTGTTTGAGTGACTTCCATCTAGAATCAGGTGGAAGATCATGATGCTAAAGCT
CCCTGGCAAACAGTGTCTTGACCGACTTCGCTTGAAGGTAAACAACAAAAAACTTGGTTTCAGTCTGTCGTGCCAGAGAAGGCGATTCCGATCTCGAGGAGAGTTGGAAC
TAAAAAAAAAAAAAAGCCCATTTCCTACTTTAAGTACATTTTCAAGTATAGAGAATTTCTAATTGGAATTTGGGAGGCAAAATTATATAGCATTATCAGTGGTTGTTCTG
GGAGTTTTGACTTGGTTATCTCTTACATAATGACTGTATAGAACCCCTCATTTGATATCCTCTTCACTTACTTCACTGACTACTTCTCTTATAGACATTTTCTTCCTTCT
TTCTTACATGGAAGACTTATTCCTTCCATACTGTGAAATTAATGATAATGTAAGATAAATTGCACAAAAACCAAGGTGCATTCCCATAAACAGTATAAAGTCATCTCTGT
ATACTTCTTCTTCTTCATATGAATGCGAATAATTGTTCTCACAATTTTTAGCTTTTGTTCTCAAGGAATGATGGCCAATGATTCATTCAAATGCTG
Protein sequenceShow/hide protein sequence
MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCDRVELAVAGDIDGGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIG
EMNCNRVSNFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATA
AVQGAEVTPDSKSKSAAVKEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKYRNNVRKTSNGNQNPTRCNQQTTREVNVLSKENKTQMKEQ
VVKPNNKPSSNTNSGLLRQQKLSTEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGG
FNRHWTNGRR