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Cmc04g0118421 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0118421
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPhototropic-responsive NPH3 family protein
Genome locationCMiso1.1chr04:35086953..35088813
RNA-Seq ExpressionCmc04g0118421
SyntenyCmc04g0118421
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR42073.1 hypothetical protein CICLE_v10012558mg [Citrus clementina]3.9e-0765.45Show/hide
Query:  MAVALVFLLMNIIGLARDLPLLLLPTLLLKNLINGGGNFSVRPGLDIGFADGFIF
        +++A +F L   IGL RDLPLLLLPTLLLKN I+GGG FS RPGLD+G    FIF
Subjt:  MAVALVFLLMNIIGLARDLPLLLLPTLLLKNLINGGGNFSVRPGLDIGFADGFIF
GER28690.1 phototropic-responsive NPH3 family protein [Striga asiatica]6.9e-0465.12Show/hide
Query:  IGLARDLPLLLLPTLLLKNLINGGGNFSVRPGLDIGFADGFIF
        +GL RDLP L LP L+ + LINGGGNFS RPGLD GF    IF
Subjt:  IGLARDLPLLLLPTLLLKNLINGGGNFSVRPGLDIGFADGFIF
KAE8676660.1 hypothetical protein F3Y22_tig00111582pilonHSYRG00415 [Hibiscus syriacus]7.9e-0869.09Show/hide
Query:  MAVALVFLLMNIIGLARDLPLLLLPTLLLKNLINGGGNFSVRPGLDIGFADGFIF
        +++A+ F LMN IGL  DLPLLLLPTLLLKN+INGG  FS RPGLD+GF + FIF
Subjt:  MAVALVFLLMNIIGLARDLPLLLLPTLLLKNLINGGGNFSVRPGLDIGFADGFIF
KAF7807101.1 hypothetical protein G2W53_039262 [Senna tora]2.5e-0976.92Show/hide
Query:  ALVFLLMNIIGLARDLPLLLLPTLLLKNLINGGGNFSVRPGLDIGFADGFIF
        A+VF L N IGL  DLPLLLLPTLLLKNLING GNFSVRPGL++G AD F+F
Subjt:  ALVFLLMNIIGLARDLPLLLLPTLLLKNLINGGGNFSVRPGLDIGFADGFIF
KAF7818594.1 hypothetical protein G2W53_024049 [Senna tora]1.9e-0972.73Show/hide
Query:  MAVALVFLLMNIIGLARDLPLLLLPTLLLKNLINGGGNFSVRPGLDIGFADGFIF
        +++A+VF L N IGL  DLP LLLPTLLLKNLINGGGNFSVRPGL++G AD F+F
Subjt:  MAVALVFLLMNIIGLARDLPLLLLPTLLLKNLINGGGNFSVRPGLDIGFADGFIF
TrEMBL top hitse value%identityAlignment
A0A5A7P7D1 Phototropic-responsive NPH3 family protein3.4e-0465.12Show/hide
Query:  IGLARDLPLLLLPTLLLKNLINGGGNFSVRPGLDIGFADGFIF
        +GL RDLP L LP L+ + LINGGGNFS RPGLD GF    IF
Subjt:  IGLARDLPLLLLPTLLLKNLINGGGNFSVRPGLDIGFADGFIF
A0A6A2Y0L1 Uncharacterized protein3.8e-0869.09Show/hide
Query:  MAVALVFLLMNIIGLARDLPLLLLPTLLLKNLINGGGNFSVRPGLDIGFADGFIF
        +++A+ F LMN IGL  DLPLLLLPTLLLKN+INGG  FS RPGLD+GF + FIF
Subjt:  MAVALVFLLMNIIGLARDLPLLLLPTLLLKNLINGGGNFSVRPGLDIGFADGFIF
M5W4P4 Uncharacterized protein2.0e-0963.93Show/hide
Query:  MAVALVFLLMNIIGLARDLPLLLLPTLLLKNLINGGGNFSVRPGLDIGFADGFIFKRKKKN
        +++A+ F L N IGL R+ PLLLLPTL+L+NL NGGGN SVRPGLD+GFAD FIF  +  N
Subjt:  MAVALVFLLMNIIGLARDLPLLLLPTLLLKNLINGGGNFSVRPGLDIGFADGFIFKRKKKN
V4S3V8 Uncharacterized protein1.9e-0765.45Show/hide
Query:  MAVALVFLLMNIIGLARDLPLLLLPTLLLKNLINGGGNFSVRPGLDIGFADGFIF
        +++A +F L   IGL RDLPLLLLPTLLLKN I+GGG FS RPGLD+G    FIF
Subjt:  MAVALVFLLMNIIGLARDLPLLLLPTLLLKNLINGGGNFSVRPGLDIGFADGFIF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTGCGTTAGTCTTCCTTCTCATGAACATCATCGGACTAGCACGTGACCTTCCTCTGCTTTTGCTCCCCACATTGCTCCTCAAAAACCTCATCAATGGCGGCGG
AAATTTCTCCGTCCGACCTGGACTCGATATCGGCTTCGCCGATGGCTTCATTTTCAAAAGAAAAAAAAAAAACCCAACCTTCTTCTTCTTCAACCACTTTCACAAAAAAA
GACCCTCCCTTCGGTTCCTCTGCAATCGCCGCCGTGAAGATGGGCGGTTTCGGAGTCAGTCCTTCACTGATGAGAATTAG
mRNA sequenceShow/hide mRNA sequence
TTAAATATAGAAGCTCTAGATTTTCATGGGCAAATAATAAAATTAAAAAATTTTCACAATTTCTTCATCATAGCTTTTTTTTCTTTTTTTCTTTTTTTCTTTTTGCTATG
GAGATTCTCTACCATAGCTTTAGAGATAGAGAAATTTATACAAAACCCAAAATGAAAAAAGAAAAAAAAAACTATGAATATTGAAGTAAGAAGAAGAAGGAATTAAGAAT
TAAAAGTGGTGTTTTTGCTAATAATTATATTGTTATGAATTGTTTGGTAAGCAAGAATCAGGAATCCCCAACCTTCTCTTCTTCCAGAATCCTACTTCTGGATTCATCTT
CTCCGCCGTTCTCGACGGTTCCGATTTGCAACGTGTCAAAATCAACGGCCGAGATGAGCTTCCGAGGGCTTCTTCTTCTTCCCCTGTTTTTTCCCGTTTAATATTAGCTG
ATGTGACGATTCTTTCTGGAATGGAATGTTCGTCAATGTTCTTCGCAAATTCCTCGTCCTCCTCGAATTCTAAGCCTCCACTCGGATCTTGATCCGAAACTGAAGCTCTT
TGGGATGTGGGTTTCTCAATCTCGACTGTTTTTCCGCCATTGTTGGGCTTTGTGCTCTGTTCTTTTTCTTTTTCTTCTTCTTTTTCTTCCTGATTTTCCTCGTTTTTCAA
AGGAGACCCCCAAAATCTACTCGCTAATGATGTCGATCGATATGGAGCAGATCTGCATCTCGTTAATAACAATGCGTTCTTCGGGGGAGAAGAATTTGAAGAAATCAACG
CTTCGGCGGTTTCTTCTTCTTCTTCTTCATCGTTGTCGACAGCGGCGACAACTTGGATTTCTGTGTTTGAAATTTCAACTCCGCCATGAAAGGGGGTTTCCCGCGGCGGC
GAATTTGTTCTAACTTTGGGTTTCCGGCGGAACCCACATTGAAAAAACGAGACCAATCTCTGAAAAATTGGAGAAGAATTGGGTTTGAATTTCTTTCGAAAACAGGGGCA
AAACAGAGCAGCTCGGGTCCAACGACATCGACGACGGCGCGTAGGAGTACCAGAACGCTTTCGGCGGCGCGTGGTGGCGCGACGAACTCGGACTTGGCCGATACAAGTGA
CTTTAGGGGATGAAGGCTCTTGAGTTTCAATGGCGGTTGCGTTAGTCTTCCTTCTCATGAACATCATCGGACTAGCACGTGACCTTCCTCTGCTTTTGCTCCCCACATTG
CTCCTCAAAAACCTCATCAATGGCGGCGGAAATTTCTCCGTCCGACCTGGACTCGATATCGGCTTCGCCGATGGCTTCATTTTCAAAAGAAAAAAAAAAAACCCAACCTT
CTTCTTCTTCAACCACTTTCACAAAAAAAGACCCTCCCTTCGGTTCCTCTGCAATCGCCGCCGTGAAGATGGGCGGTTTCGGAGTCAGTCCTTCACTGATGAGAATTAGA
AGATTTTCAATTCACTATGGAAATTTATGAGTTTTTCATTATTATTTCCTTTTCCCTTTCTTTTTGGGGGAAAATATTTGTTTTGTGTGTGATAATATATATATGTGTGT
GTGTGTATAAGTGCACGGATGGTGAATCGACCGCAGGGATTTTTCTATATTATAAGATCTAGAAGCTTTTGTGTCTATGTGAGGGCTATTTTAGTCATTTCGAGAGGGTA
TTTATTTATTTATTTATTTATTTATTTATTTTAAAAACTCAGTAAATATATAATATATGTATATATGTATACATGTATATATGTGTGTGTGTGTGTGAGTGAAGTAGGTC
TTTGATTGAATATTTATTTATGTTTATATGGAAGAGAGTAGTATAGTAGCTGATTGAATCTTGAATGTGAACGTAAGCAGAGGTAGCCGTTTTAGTCTTTG
Protein sequenceShow/hide protein sequence
MAVALVFLLMNIIGLARDLPLLLLPTLLLKNLINGGGNFSVRPGLDIGFADGFIFKRKKKNPTFFFFNHFHKKRPSLRFLCNRRREDGRFRSQSFTDEN