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Cmc04g0118521 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0118521
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionLow temperature-induced protein
Genome locationCMiso1.1chr04:35124610..35126966
RNA-Seq ExpressionCmc04g0118521
SyntenyCmc04g0118521
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR000612 - Proteolipid membrane potential modulator


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137807.1 low temperature-induced protein lt101.2 [Cucumis sativus]1.4e-2794.2Show/hide
Query:  MHGAGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIGTR
        M G GQVDRIPKRMGSATF+EVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGI+YAVYVLIGTR
Subjt:  MHGAGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIGTR

XP_008442650.1 PREDICTED: low temperature-induced protein lt101.2-like [Cucumis melo]1.5e-29100Show/hide
Query:  MHGAGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIGTR
        MHGAGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIGTR
Subjt:  MHGAGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIGTR

XP_022145681.1 low temperature-induced protein lt101.2-like [Momordica charantia]1.5e-2184.38Show/hide
Query:  QVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIGTR
        Q DRIPKRMGSATF+EVLLA+FIPP+GVFLRYGIGIEFWI L+LTF GY+PGIVYAVYVL+G R
Subjt:  QVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIGTR

XP_022945600.1 low temperature-induced protein lt101.2-like [Cucurbita moschata]1.1e-2185.48Show/hide
Query:  QVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIG
        Q +RIPKRMGSATFVEVL+AIFIPP+GVFLRYGIG+EFWIDLVLTF GY+PGI+YAVYVL+G
Subjt:  QVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIG

XP_038906189.1 low temperature-induced protein lt101.2-like [Benincasa hispida]7.2e-2487.88Show/hide
Query:  AGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIGTR
        A Q DRIPKRMGSATF+EVLLAIFIPP+GVFLRYGIGIEFWIDLVLT FGY+PGI+YAVYVL+GTR
Subjt:  AGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIGTR

TrEMBL top hitse value%identityAlignment
A0A0A0LAU7 Uncharacterized protein6.8e-2894.2Show/hide
Query:  MHGAGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIGTR
        M G GQVDRIPKRMGSATF+EVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGI+YAVYVLIGTR
Subjt:  MHGAGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIGTR

A0A1S3B667 low temperature-induced protein lt101.2-like7.2e-30100Show/hide
Query:  MHGAGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIGTR
        MHGAGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIGTR
Subjt:  MHGAGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIGTR

A0A6J1CX15 low temperature-induced protein lt101.2-like7.3e-2284.38Show/hide
Query:  QVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIGTR
        Q DRIPKRMGSATF+EVLLA+FIPP+GVFLRYGIGIEFWI L+LTF GY+PGIVYAVYVL+G R
Subjt:  QVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIGTR

A0A6J1G1E1 low temperature-induced protein lt101.2-like5.6e-2285.48Show/hide
Query:  QVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIG
        Q +RIPKRMGSATFVEVL+AIFIPP+GVFLRYGIG+EFWIDLVLTF GY+PGI+YAVYVL+G
Subjt:  QVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIG

A0A6J1KU26 low temperature-induced protein lt101.2-like5.6e-2285.48Show/hide
Query:  QVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIG
        Q +RIPKRMGSATFVEVL+AIFIPP+GVFLRYGIG+EFWIDLVLTF GY+PGI+YAVYVL+G
Subjt:  QVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIG

SwissProt top hitse value%identityAlignment
P68178 Salt stress-induced hydrophobic peptide ESI32.8e-1573.58Show/hide
Query:  MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLI
        MGSAT +EV+LAI +PPVGVFLRY +G+EFWI L+LT  GYIPGI+YAVYVL+
Subjt:  MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLI

P68179 Low temperature-induced protein lt101.12.8e-1573.58Show/hide
Query:  MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLI
        MGSAT +EV+LAI +PPVGVFLRY +G+EFWI L+LT  GYIPGI+YAVYVL+
Subjt:  MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLI

Q9ARD5 Low temperature-induced protein lt101.27.5e-1673.58Show/hide
Query:  MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLI
        M SATF+EV+LAI +PPVGVFLRYG+ +EFWI L+LT  GYIPGI+YAVYVL+
Subjt:  MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLI

Q9FE70 UPF0057 membrane protein At1g575509.1e-1471.15Show/hide
Query:  MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVL
        MGS  F+EVL AIFIPPVGVFLRYG+G+EFW+ L+LT F +IPG++YA+YVL
Subjt:  MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVL

Q9ZNQ7 Hydrophobic protein RCI2A1.8e-1467.31Show/hide
Query:  MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVL
        M +ATFV++++AI +PP+GVFLR+G G+EFWI LVLT  GYIPGI+YA+YVL
Subjt:  MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVL

Arabidopsis top hitse value%identityAlignment
AT1G57550.1 Low temperature and salt responsive protein family6.5e-1571.15Show/hide
Query:  MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVL
        MGS  F+EVL AIFIPPVGVFLRYG+G+EFW+ L+LT F +IPG++YA+YVL
Subjt:  MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVL

AT2G38905.1 Low temperature and salt responsive protein family8.2e-1872.22Show/hide
Query:  MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIG
        MGS TF+E++LAI +PPVGVFLRYG G+EFWI L+LT  GYIPGI+YA+YVL+G
Subjt:  MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIG

AT3G05880.1 Low temperature and salt responsive protein family1.3e-1567.31Show/hide
Query:  MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVL
        M +ATFV++++AI +PP+GVFLR+G G+EFWI LVLT  GYIPGI+YA+YVL
Subjt:  MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVL

AT3G05890.1 Low temperature and salt responsive protein family1.9e-1461.54Show/hide
Query:  MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVL
        M +ATFVE++LAI +PP+GVFL++G  +EFWI L+LT FGY+PGI+YA+Y++
Subjt:  MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVL

AT4G30650.1 Low temperature and salt responsive protein family7.7e-0857.14Show/hide
Query:  FVEVLLAIFIPPVGVFLRYG-IGIEFWIDLVLTFFGYIPGIVYAVYVLI
        F E+L+AI +PP+GV L+ G   +EF I LVLT  GYIPGI+YA+YV++
Subjt:  FVEVLLAIFIPPVGVFLRYG-IGIEFWIDLVLTFFGYIPGIVYAVYVLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACGGAGCAGGACAAGTAGATCGAATACCAAAGAGAATGGGTTCGGCCACATTCGTCGAAGTCCTTCTCGCCATCTTCATTCCACCCGTCGGCGTTTTTCTCCGCTA
TGGCATTGGGATCGAATTTTGGATTGACTTGGTGCTCACATTTTTCGGATACATTCCCGGAATTGTTTACGCCGTTTACGTCTTGATTGGAACGCGATGA
mRNA sequenceShow/hide mRNA sequence
GAGCCTGTAGATAAGTGAGTTAACTAAGTGTAAGGTGTAAGAGGTGAGAAAGTTGAATTAGGAATTTAGTATATTGTTCCCCTACTCTTAAAATTACAAATTTATGTTTT
TTTTTTTTATTTTATTTGGGGAGTTTTTTGTATTATATTTTAATTGAGAAAATAACATATTATCATAGTAAACTTTCTATTATTGTAATTTAAGATTTATTAAGGCAAAA
AGAAAAAGATGGAAGGGAAGGAGTAAAAGAAAGAAGTTAAAAAAAGAAGAGAGAAATGAGGAAGTGGTAGTAGAAAATAGGAAGTTCATTTAAAGGCGGCAGTTGAAGAG
GTGAGGCGCGGGAGGGAGGGAAGGAGAAAGGGGAAAGTGGAAATGCACGGAGCAGGACAAGTAGATCGAATACCAAAGAGAATGGGTTCGGCCACATTCGTCGAAGTCCT
TCTCGCCATCTTCATTCCACCCGTCGGCGTTTTTCTCCGCTATGGCATTGGGATCGAATTTTGGATTGACTTGGTGCTCACATTTTTCGGATACATTCCCGGAATTGTTT
ACGCCGTTTACGTCTTGATTGGAACGCGATGACTGACTGACCTTATCGTCCTTTTCTTTTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTGGATAATTTAATTTAGTGTT
TTTATTGAGATCATTAATTTAATTTATGTTATTTTTCTATTCTCGAGCCTGC
Protein sequenceShow/hide protein sequence
MHGAGQVDRIPKRMGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIGTR