; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc04g0121371 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc04g0121371
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCMiso1.1chr04:36422172..36423197
RNA-Seq ExpressionCmc04g0121371
SyntenyCmc04g0121371
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044228.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]5.2e-15399.26Show/hide
Query:  ANFFEENGSLSANIQSHSIHTAHYNFTHKLETQIPTRTTRIKSLPIPLEEGTEIFMSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLA
        ANFFEENGSLSANIQSHSIHTAHYNFTHKLETQIPTRTTRIKSLPIPLEEGTEIFMSQKDCQIRTRSISEFN+LFMDFVSENQPHHAQKLLSNISSYGLA
Subjt:  ANFFEENGSLSANIQSHSIHTAHYNFTHKLETQIPTRTTRIKSLPIPLEEGTEIFMSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLA

Query:  PNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVM
        PNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVM
Subjt:  PNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVM

Query:  LTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC
        LTKM KNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC
Subjt:  LTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC

KAG6580429.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]4.3e-9967.32Show/hide
Query:  MRLALPPSIL---------KPWVANFFEENGSLSANIQSHSIHTAHYNFTH-------KLETQIPTRTT------RIKSLPIPLEEGTEIF-MSQKDCQI
        MR+AL PS L          P+ ANF EENG LSAN + HS+     +F H       KL  QIPTR T       IKSLPIP EEGTEIF MSQK C+I
Subjt:  MRLALPPSIL---------KPWVANFFEENGSLSANIQSHSIHTAHYNFTH-------KLETQIPTRTT------RIKSLPIPLEEGTEIF-MSQKDCQI

Query:  RTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVEL
          ++I EFN LFM+FVSE++   A KLLSN+SSYGL PNCRT+ IMIR YCKKG+L+NA RVL QMLGRG NPNDATITVLVNAFCKRGK QKALEMVEL
Subjt:  RTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVEL

Query:  VGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEG
        VGR     G KPT  VQ YNCLLKGLCYVG  +    M+T+MKK+SLIPDIYTY  LMDGLCKVGRSDEA+EL +EAE+NG+KPSVVTFNTLFNGYCKEG
Subjt:  VGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEG

Query:  RPVDGI
        RP+DGI
Subjt:  RPVDGI

TYK24906.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.2e-164100Show/hide
Query:  MRLALPPSILKPWVANFFEENGSLSANIQSHSIHTAHYNFTHKLETQIPTRTTRIKSLPIPLEEGTEIFMSQKDCQIRTRSISEFNYLFMDFVSENQPHH
        MRLALPPSILKPWVANFFEENGSLSANIQSHSIHTAHYNFTHKLETQIPTRTTRIKSLPIPLEEGTEIFMSQKDCQIRTRSISEFNYLFMDFVSENQPHH
Subjt:  MRLALPPSILKPWVANFFEENGSLSANIQSHSIHTAHYNFTHKLETQIPTRTTRIKSLPIPLEEGTEIFMSQKDCQIRTRSISEFNYLFMDFVSENQPHH

Query:  AQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLL
        AQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLL
Subjt:  AQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLL

Query:  KGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC
        KGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC
Subjt:  KGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC

XP_008443567.1 PREDICTED: pentatricopeptide repeat-containing protein At5g39710-like [Cucumis melo]9.5e-123100Show/hide
Query:  MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQ
        MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQ
Subjt:  MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQ

Query:  KALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLF
        KALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLF
Subjt:  KALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLF

Query:  NGYCKEGRPVDGIMC
        NGYCKEGRPVDGIMC
Subjt:  NGYCKEGRPVDGIMC

XP_038904608.1 pentatricopeptide repeat-containing protein At1g09900-like [Benincasa hispida]4.9e-10370.33Show/hide
Query:  MRLALPPSIL---------KPWVANFFEENGSLSANIQSHSIHTAHYNFTH-------KLETQIPTRTTRIKSLPIPLEEGTEIF-MSQKDCQIRTRSIS
        M LALPPS            P+ ANF  E   LSAN QSHSI T  ++FTH       KLE +IPTR TRIKSLPIP EEGTEIF MSQK  +I  R++S
Subjt:  MRLALPPSIL---------KPWVANFFEENGSLSANIQSHSIHTAHYNFTH-------KLETQIPTRTTRIKSLPIPLEEGTEIF-MSQKDCQIRTRSIS

Query:  EFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIG
        EFN   MDFVSEN+   A KLLSNISSYGL PN RT+ IMIR YCKKGEL+ AG+VLEQM+GRGHNPNDAT+TVLVNAFCKRGKTQKALEMVE+VGR   
Subjt:  EFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIG

Query:  VGGSKPTVQVQTYNCLLKGLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGI
          G KPT  VQTYNCLLKGLCYVG  +    M+T+MKK+ LIPDIYTY  LMDGLCKVGRSDEA+EL  EAE NGLKPSVVTFNTLFNGYCKEGRPVDGI
Subjt:  VGGSKPTVQVQTYNCLLKGLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGI

TrEMBL top hitse value%identityAlignment
A0A1S3B7W4 pentatricopeptide repeat-containing protein At5g39710-like4.6e-123100Show/hide
Query:  MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQ
        MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQ
Subjt:  MSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQ

Query:  KALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLF
        KALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLF
Subjt:  KALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLF

Query:  NGYCKEGRPVDGIMC
        NGYCKEGRPVDGIMC
Subjt:  NGYCKEGRPVDGIMC

A0A5A7TMX5 Pentatricopeptide repeat-containing protein2.5e-15399.26Show/hide
Query:  ANFFEENGSLSANIQSHSIHTAHYNFTHKLETQIPTRTTRIKSLPIPLEEGTEIFMSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLA
        ANFFEENGSLSANIQSHSIHTAHYNFTHKLETQIPTRTTRIKSLPIPLEEGTEIFMSQKDCQIRTRSISEFN+LFMDFVSENQPHHAQKLLSNISSYGLA
Subjt:  ANFFEENGSLSANIQSHSIHTAHYNFTHKLETQIPTRTTRIKSLPIPLEEGTEIFMSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLA

Query:  PNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVM
        PNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVM
Subjt:  PNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVM

Query:  LTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC
        LTKM KNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC
Subjt:  LTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC

A0A5D3DMN4 Pentatricopeptide repeat-containing protein1.1e-164100Show/hide
Query:  MRLALPPSILKPWVANFFEENGSLSANIQSHSIHTAHYNFTHKLETQIPTRTTRIKSLPIPLEEGTEIFMSQKDCQIRTRSISEFNYLFMDFVSENQPHH
        MRLALPPSILKPWVANFFEENGSLSANIQSHSIHTAHYNFTHKLETQIPTRTTRIKSLPIPLEEGTEIFMSQKDCQIRTRSISEFNYLFMDFVSENQPHH
Subjt:  MRLALPPSILKPWVANFFEENGSLSANIQSHSIHTAHYNFTHKLETQIPTRTTRIKSLPIPLEEGTEIFMSQKDCQIRTRSISEFNYLFMDFVSENQPHH

Query:  AQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLL
        AQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLL
Subjt:  AQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLL

Query:  KGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC
        KGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC
Subjt:  KGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC

A0A6J1F9P1 pentatricopeptide repeat-containing protein At1g09900-like2.1e-9967.32Show/hide
Query:  MRLALPPSIL---------KPWVANFFEENGSLSANIQSHSIHTAHYNFTH-------KLETQIPTRTT------RIKSLPIPLEEGTEIF-MSQKDCQI
        MR+AL PS L          P+ ANF EENG LSAN + HS+     +F H       KL  QIPTR T       IKSLPIP EEGTEIF MSQK C+I
Subjt:  MRLALPPSIL---------KPWVANFFEENGSLSANIQSHSIHTAHYNFTH-------KLETQIPTRTT------RIKSLPIPLEEGTEIF-MSQKDCQI

Query:  RTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVEL
          ++I EFN LFM+FVSE++   A KLLSN+SSYGL PNCRT+ IMIR YCKKG+L+NA RVL QMLGRG NPNDATITVLVNAFCKRGK QKALEMVEL
Subjt:  RTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVEL

Query:  VGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEG
        VGR     G KPT  VQ YNCLLKGLCYVG  +    M+T+MKK+SLIPDIYTY  LMDGLCKVGRSDEA+EL +EAE+NG+KPSVVTFNTLFNGYCKEG
Subjt:  VGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEG

Query:  RPVDGI
        RP+DGI
Subjt:  RPVDGI

A0A6J1J506 pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like4.4e-9766.67Show/hide
Query:  MRLALPPSIL---------KPWVANFFEENGSLSANIQSHSIHTAHYNFTH-------KLETQIPTRTT------RIKSLPIPLEEGTEIF-MSQKDCQI
        MRLAL PS L          P+ ANF E N   SAN + HS+    ++F H       KL  QIPTR T      RIKSLPIP EEGTEIF MSQK C+I
Subjt:  MRLALPPSIL---------KPWVANFFEENGSLSANIQSHSIHTAHYNFTH-------KLETQIPTRTT------RIKSLPIPLEEGTEIF-MSQKDCQI

Query:  RTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVEL
          ++I EFN LFM+FVSE++   A KLLSN++SYGL PN RT+ IMIR YCKKG+LDNA RVL QMLGRG NPNDATITVLVNAFCKRGK QKALEMVEL
Subjt:  RTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVEL

Query:  VGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEG
        VGR     G KPT  VQ YNCLLKGLCYVG  +    M+T+MKK+SLIPDIYTY  LMDGLCKVGRSDEA+EL +EAE NG+KPSVVTFNTLFNGYCKEG
Subjt:  VGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEG

Query:  RPVDGI
        RP+DGI
Subjt:  RPVDGI

SwissProt top hitse value%identityAlignment
Q0WKV3 Pentatricopeptide repeat-containing protein At1g12300, mitochondrial3.3e-2529.85Show/hide
Query:  SISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGR
        ++  F+ L   FV E +   A++L   +   G+AP+  TY  +I  +CK+  LD A ++++ M+ +G +PN  T  +L+N +CK  +    LE+   +  
Subjt:  SISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGR

Query:  RIGVGGSKPTVQVQTYNCLLKGLCYVGEWK-RPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPV
        R GV          TYN L++G C +G+      +  +M    + P+I TYK+L+DGLC  G S++ALE+  + E++ ++  +  +N + +G C   +  
Subjt:  RIGVGGSKPTVQVQTYNCLLKGLCYVGEWK-RPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPV

Query:  D
        D
Subjt:  D

Q0WVK7 Pentatricopeptide repeat-containing protein At1g05670, mitochondrial7.3e-2533.33Show/hide
Query:  TRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELV
        T  +  +  +   F        A KL   +   GL P+  T+  +I  YCK G + +A RV   M+  G +PN  T T L++  CK G    A E++  +
Subjt:  TRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELV

Query:  GRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVMLT-KMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGR
         +     G +P   + TYN ++ GLC  G  +  V L  + +   L  D  TY  LMD  CK G  D+A E+  E    GL+P++VTFN L NG+C  G 
Subjt:  GRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVMLT-KMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGR

Query:  PVDG
          DG
Subjt:  PVDG

Q9FIX3 Pentatricopeptide repeat-containing protein At5g397102.3e-2632.47Show/hide
Query:  FNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGV
        +N L   +  E   H A  + + +  +GL P+  TY  +I   CK G ++ A   L+QM  RG  PN+ T T LV+ F ++G   +A  ++    R +  
Subjt:  FNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGV

Query:  GGSKPTVQVQTYNCLLKGLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGR
         G  P+  V TYN L+ G C  G+ +  + +L  MK+  L PD+ +Y  ++ G C+    DEAL +  E  E G+KP  +T+++L  G+C++ R
Subjt:  GGSKPTVQVQTYNCLLKGLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGR

Q9LFF1 Pentatricopeptide repeat-containing protein At3g53700, chloroplastic6.0e-2731.98Show/hide
Query:  ISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRR
        +S FN L       +Q   A  +L ++ SYGL P+ +T+  +++ Y ++G+LD A R+ EQM+  G + ++ ++ V+V+ FCK G+ + AL  ++ +  +
Subjt:  ISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRR

Query:  IGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGR
         G    +      T+N L+ GLC  G  K  + ++  M +    PD+YTY  ++ GLCK+G   EA+E+ ++       P+ VT+NTL +  CKE +
Subjt:  IGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGR

Q9LSL9 Pentatricopeptide repeat-containing protein At5g655602.7e-2730.09Show/hide
Query:  LEEGTEIFMSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNA
        ++E  ++F+  KD +    ++  +  L        +   A  L+  +   G+ PN  TY ++I   C + + + A  +L QML +G  PN  T   L+N 
Subjt:  LEEGTEIFMSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNA

Query:  FCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPS
        +CKRG  + A+++VEL+  R      K +   +TYN L+KG C     K   +L KM +  ++PD+ TY  L+DG C+ G  D A  L +   + GL P 
Subjt:  FCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPS

Query:  VVTFNTLFNGYCKEGR
          T+ ++ +  CK  R
Subjt:  VVTFNTLFNGYCKEGR

Arabidopsis top hitse value%identityAlignment
AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein5.2e-2633.33Show/hide
Query:  TRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELV
        T  +  +  +   F        A KL   +   GL P+  T+  +I  YCK G + +A RV   M+  G +PN  T T L++  CK G    A E++  +
Subjt:  TRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELV

Query:  GRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVMLT-KMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGR
         +     G +P   + TYN ++ GLC  G  +  V L  + +   L  D  TY  LMD  CK G  D+A E+  E    GL+P++VTFN L NG+C  G 
Subjt:  GRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVMLT-KMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGR

Query:  PVDG
          DG
Subjt:  PVDG

AT1G12300.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.3e-2629.85Show/hide
Query:  SISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGR
        ++  F+ L   FV E +   A++L   +   G+AP+  TY  +I  +CK+  LD A ++++ M+ +G +PN  T  +L+N +CK  +    LE+   +  
Subjt:  SISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGR

Query:  RIGVGGSKPTVQVQTYNCLLKGLCYVGEWK-RPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPV
        R GV          TYN L++G C +G+      +  +M    + P+I TYK+L+DGLC  G S++ALE+  + E++ ++  +  +N + +G C   +  
Subjt:  RIGVGGSKPTVQVQTYNCLLKGLCYVGEWK-RPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPV

Query:  D
        D
Subjt:  D

AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein4.2e-2831.98Show/hide
Query:  ISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRR
        +S FN L       +Q   A  +L ++ SYGL P+ +T+  +++ Y ++G+LD A R+ EQM+  G + ++ ++ V+V+ FCK G+ + AL  ++ +  +
Subjt:  ISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRR

Query:  IGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGR
         G    +      T+N L+ GLC  G  K  + ++  M +    PD+YTY  ++ GLCK+G   EA+E+ ++       P+ VT+NTL +  CKE +
Subjt:  IGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGR

AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.6e-2732.47Show/hide
Query:  FNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGV
        +N L   +  E   H A  + + +  +GL P+  TY  +I   CK G ++ A   L+QM  RG  PN+ T T LV+ F ++G   +A  ++    R +  
Subjt:  FNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGV

Query:  GGSKPTVQVQTYNCLLKGLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGR
         G  P+  V TYN L+ G C  G+ +  + +L  MK+  L PD+ +Y  ++ G C+    DEAL +  E  E G+KP  +T+++L  G+C++ R
Subjt:  GGSKPTVQVQTYNCLLKGLCYVGEWKRPV-MLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGR

AT5G65560.1 Pentatricopeptide repeat (PPR) superfamily protein1.9e-2830.09Show/hide
Query:  LEEGTEIFMSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNA
        ++E  ++F+  KD +    ++  +  L        +   A  L+  +   G+ PN  TY ++I   C + + + A  +L QML +G  PN  T   L+N 
Subjt:  LEEGTEIFMSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLLSNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNA

Query:  FCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPS
        +CKRG  + A+++VEL+  R      K +   +TYN L+KG C     K   +L KM +  ++PD+ TY  L+DG C+ G  D A  L +   + GL P 
Subjt:  FCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWKRPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPS

Query:  VVTFNTLFNGYCKEGR
          T+ ++ +  CK  R
Subjt:  VVTFNTLFNGYCKEGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCTCGCCCTACCCCCCTCTATCCTCAAGCCTTGGGTTGCCAACTTCTTTGAAGAAAATGGTAGCCTAAGCGCCAATATACAATCCCATTCCATCCATACC
GCTCACTATAATTTCACTCACAAACTGGAGACTCAGATCCCCACTAGAACGACCAGAATTAAATCGCTCCCAATACCGTTGGAAGAAGGGACTGAAATTTTCATG
TCTCAGAAAGACTGTCAGATTCGAACTCGAAGCATATCTGAATTCAATTACCTGTTCATGGATTTCGTCTCAGAAAATCAGCCACATCATGCCCAGAAACTGTTG
TCCAATATATCATCTTACGGTTTGGCCCCAAATTGTAGAACATATTTGATCATGATAAGATTCTATTGCAAGAAAGGAGAATTGGATAACGCAGGCAGGGTTTTG
GAGCAAATGCTGGGAAGGGGTCATAACCCAAACGATGCGACCATCACAGTTCTCGTGAATGCTTTCTGCAAAAGGGGTAAAACGCAGAAGGCTTTAGAAATGGTT
GAGCTGGTGGGAAGGAGGATTGGAGTTGGAGGCAGCAAGCCAACCGTTCAGGTTCAGACATACAATTGTTTGTTGAAAGGGCTATGTTACGTTGGAGAGTGGAAG
AGGCCTGTGATGTTGACGAAAATGAAGAAGAATAGCTTGATACCCGACATTTACACGTATAAGGTTCTTATGGATGGCTTGTGTAAGGTCGGCAGATCAGACGAG
GCATTGGAATTGCCCAATGAAGCAGAGGAAAATGGTTTAAAACCAAGTGTTGTCACTTTCAACACCCTCTTCAATGGCTATTGCAAGGAGGGCAGGCCAGTGGAT
GGAATCATGTGTTGA
mRNA sequenceShow/hide mRNA sequence
GGATAATTGATATGCATTATCGATTCTGCTTTATATTATGGGTTTAACCCTCTCCTTGACGATATTGGGCCATATTAGCTATCAAAAGCCAAGGCCCAAACAACT
TCGCCTTCGATTTTTTCATTATCGCATTGAGCCACGCCAGCTTCTCATCCAAAACATAAACTAATGCGTCTCGCCCTACCCCCCTCTATCCTCAAGCCTTGGGTT
GCCAACTTCTTTGAAGAAAATGGTAGCCTAAGCGCCAATATACAATCCCATTCCATCCATACCGCTCACTATAATTTCACTCACAAACTGGAGACTCAGATCCCC
ACTAGAACGACCAGAATTAAATCGCTCCCAATACCGTTGGAAGAAGGGACTGAAATTTTCATGTCTCAGAAAGACTGTCAGATTCGAACTCGAAGCATATCTGAA
TTCAATTACCTGTTCATGGATTTCGTCTCAGAAAATCAGCCACATCATGCCCAGAAACTGTTGTCCAATATATCATCTTACGGTTTGGCCCCAAATTGTAGAACA
TATTTGATCATGATAAGATTCTATTGCAAGAAAGGAGAATTGGATAACGCAGGCAGGGTTTTGGAGCAAATGCTGGGAAGGGGTCATAACCCAAACGATGCGACC
ATCACAGTTCTCGTGAATGCTTTCTGCAAAAGGGGTAAAACGCAGAAGGCTTTAGAAATGGTTGAGCTGGTGGGAAGGAGGATTGGAGTTGGAGGCAGCAAGCCA
ACCGTTCAGGTTCAGACATACAATTGTTTGTTGAAAGGGCTATGTTACGTTGGAGAGTGGAAGAGGCCTGTGATGTTGACGAAAATGAAGAAGAATAGCTTGATA
CCCGACATTTACACGTATAAGGTTCTTATGGATGGCTTGTGTAAGGTCGGCAGATCAGACGAGGCATTGGAATTGCCCAATGAAGCAGAGGAAAATGGTTTAAAA
CCAAGTGTTGTCACTTTCAACACCCTCTTCAATGGCTATTGCAAGGAGGGCAGGCCAGTGGATGGAATCATGTGTTGAACA
Protein sequenceShow/hide protein sequence
MRLALPPSILKPWVANFFEENGSLSANIQSHSIHTAHYNFTHKLETQIPTRTTRIKSLPIPLEEGTEIFMSQKDCQIRTRSISEFNYLFMDFVSENQPHHAQKLL
SNISSYGLAPNCRTYLIMIRFYCKKGELDNAGRVLEQMLGRGHNPNDATITVLVNAFCKRGKTQKALEMVELVGRRIGVGGSKPTVQVQTYNCLLKGLCYVGEWK
RPVMLTKMKKNSLIPDIYTYKVLMDGLCKVGRSDEALELPNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIMC