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Cmc05g0125321 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0125321
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionSmall ubiquitin-related modifier
Genome locationCMiso1.1chr05:2402314..2403965
RNA-Seq ExpressionCmc05g0125321
SyntenyCmc05g0125321
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR022617 - Rad60/SUMO-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061648.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa]6.2e-5199.06Show/hide
Query:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG
        MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTI FLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG
Subjt:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG

Query:  GGGGAI
        GGGGAI
Subjt:  GGGGAI

XP_022969393.1 small ubiquitin-related modifier 1-like isoform X2 [Cucurbita maxima]1.2e-3070.19Show/hide
Query:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG
        MST+M+  + E  TRK E +P + YVN+KVNGQDGSEVYFRI K+++LSKLM  YCKRQ LE  TI FL+DGH IAG QTA+ELG+EDGDEIDAMKHH G
Subjt:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG

Query:  GGGG
        GGGG
Subjt:  GGGG

XP_023553983.1 small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo]1.6e-3067.92Show/hide
Query:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG
        MST+M+  + E  TRK E +P S+YVN+KVNGQDGSEVYFRI K+++LS+LM +YCKRQ LE  TI FL+DGH I G QTA+ELG+EDGDEIDAMKHH G
Subjt:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG

Query:  GGGGAI
        GGGG +
Subjt:  GGGGAI

XP_031743856.1 small ubiquitin-related modifier 1-like [Cucumis sativus]9.0e-4285.98Show/hide
Query:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG
        MST MNNG DEETTRK +PKPESEYVNLKVNGQDGS+VYFRI KK+E++KLM SYC+RQELEFSTI FL+DGHPIAGTQTAEELGLEDGDEIDAMKHH G
Subjt:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG

Query:  GGG-GAI
        GGG GAI
Subjt:  GGG-GAI

XP_038888534.1 small ubiquitin-related modifier 1-like isoform X1 [Benincasa hispida]2.4e-3475.47Show/hide
Query:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG
        MS +  N SDEET RK E KP+SEYVNLKVNGQDGSEVYFRI K+++L KLM SYCKRQ LE  TI FL+DGH IAGTQTAEEL +EDGDEIDAMKHH G
Subjt:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG

Query:  GGGGAI
        G  GAI
Subjt:  GGGGAI

TrEMBL top hitse value%identityAlignment
A0A5A7V249 Small ubiquitin-related modifier 13.0e-5199.06Show/hide
Query:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG
        MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTI FLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG
Subjt:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG

Query:  GGGGAI
        GGGGAI
Subjt:  GGGGAI

A0A5N6QIF0 Small ubiquitin-related modifier6.1e-2050.49Show/hide
Query:  STSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG
        +T+   G      ++ E KP  +++NLKV GQDG+EV+FRI + ++L KLM +YC RQ +EF++I FL DG  + G QT +EL +EDGDEIDAM H  GG
Subjt:  STSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG

Query:  GGG
        G G
Subjt:  GGG

A0A6J1D1W9 small ubiquitin-related modifier 1-like4.4e-2666.32Show/hide
Query:  EETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGGA
        EE+TRK E +P+ EYVN+KVNGQDGSEVYFR+ KK++L KLM SYC+RQ  +   + FL+DGH I G QT E+L L+DGDEIDAM HH GGGGGA
Subjt:  EETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGGA

A0A6J1GLF8 Small ubiquitin-related modifier7.2e-2966.36Show/hide
Query:  MSTSMNNGSDEETTRKNEPKP-ESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHY
        MST+M+  + E   RK E +P    YVN+KVNGQDGSEVYFRI K+++LSKLM +YCKRQ LE  TI FL+DGH IAG QTA+ELG+EDGD+IDAMKHH 
Subjt:  MSTSMNNGSDEETTRKNEPKP-ESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHY

Query:  GGGGGAI
        GGGGG +
Subjt:  GGGGGAI

A0A6J1I0U8 small ubiquitin-related modifier 1-like isoform X25.9e-3170.19Show/hide
Query:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG
        MST+M+  + E  TRK E +P + YVN+KVNGQDGSEVYFRI K+++LSKLM  YCKRQ LE  TI FL+DGH IAG QTA+ELG+EDGDEIDAMKHH G
Subjt:  MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYG

Query:  GGGG
        GGGG
Subjt:  GGGG

SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt31.8e-1648.86Show/hide
Query:  TRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG
        T + + KP +E++NLKV GQD +EV+F+I K +E SKLM  YC RQ    +++ FLVDG  I   QT  EL +EDGD+I+A+    GG
Subjt:  TRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG

P55852 Small ubiquitin-related modifier 11.3e-1951.72Show/hide
Query:  EPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGG
        +P     ++NLKV GQDG+EV+FRI + ++L KLM +YC RQ ++ ++I FL DG  +   QT +EL +EDGDEIDAM H  GG GG
Subjt:  EPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGG

P55857 Small ubiquitin-related modifier 12.9e-1955.84Show/hide
Query:  YVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG
        ++NLKV GQDG+EV+FRI + ++L KLM +YC RQ ++ + I FL DG  + G QT +EL +EDGDEIDAM H  GG
Subjt:  YVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG

Q6DI05 Small ubiquitin-related modifier 34.8e-1448.78Show/hide
Query:  KPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG
        K E++++NLKV GQDGS V F+I + + LSKLM +YC+RQ L    I F  DG PI  T T  +L +ED D ID  +   GG
Subjt:  KPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG

Q9FLP6 Small ubiquitin-related modifier 24.5e-2052.22Show/hide
Query:  TRKNEPKP-ESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGG
        T + + KP +  ++NLKV GQDG+EV+FRI + ++L KLM +YC RQ ++F++I FL DG  +   QT +EL +EDGDEIDAM H  GGG
Subjt:  TRKNEPKP-ESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGG

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 19.3e-2151.72Show/hide
Query:  EPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGG
        +P     ++NLKV GQDG+EV+FRI + ++L KLM +YC RQ ++ ++I FL DG  +   QT +EL +EDGDEIDAM H  GG GG
Subjt:  EPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGG

AT5G55160.1 small ubiquitin-like modifier 23.2e-2152.22Show/hide
Query:  TRKNEPKP-ESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGG
        T + + KP +  ++NLKV GQDG+EV+FRI + ++L KLM +YC RQ ++F++I FL DG  +   QT +EL +EDGDEIDAM H  GGG
Subjt:  TRKNEPKP-ESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGG

AT5G55160.2 small ubiquitin-like modifier 21.9e-1845.63Show/hide
Query:  TRKNEPKP-ESEYVNLKVNGQ-------------DGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHY
        T + + KP +  ++NLKV GQ             DG+EV+FRI + ++L KLM +YC RQ ++F++I FL DG  +   QT +EL +EDGDEIDAM H  
Subjt:  TRKNEPKP-ESEYVNLKVNGQ-------------DGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHY

Query:  GGG
        GGG
Subjt:  GGG

AT5G55170.1 small ubiquitin-like modifier 39.3e-1341.24Show/hide
Query:  MNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG
        M+N  D+    K   + +  +V LKV  QDG EV F+  K + L KLMY YC R+ L+     F+ +G  I G +T +EL +EDGD IDA +   GG
Subjt:  MNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG

AT5G55856.1 Ubiquitin-like superfamily protein7.2e-1345.24Show/hide
Query:  EPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG
        +P   S ++ +KV  QD   VYFRI +  EL K+M++Y  +  +E ST+ FL DG+ I   QT  ELGLED DEI+A     GG
Subjt:  EPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACATCGATGAACAACGGCAGCGATGAAGAAACAACCCGAAAAAACGAACCAAAACCCGAGTCGGAGTACGTCAACCTCAAAGTGAATGGCCAGGATGGG
AGCGAAGTGTATTTCAGGATTTCTAAGAAATCCGAACTCAGCAAACTCATGTATTCTTACTGTAAAAGACAAGAGTTAGAGTTCAGTACCATTGTTTTTCTCGTG
GACGGCCATCCCATTGCTGGAACCCAAACCGCGGAAGAGCTGGGGTTGGAAGATGGAGATGAAATTGATGCCATGAAACACCACTACGGCGGCGGCGGCGGAGCA
ATCTGA
mRNA sequenceShow/hide mRNA sequence
AATGCACCGATCAAATCAAAACTATTTCTTCTCCCAAAAAGAAAAAGTAGAAAAATACCATTTTGTTTTCTAAGTGTTTATACCAAACTAAAATGATGTGTTTCA
CTGATTAAACAATGTTTAAGAAACCCCTAATCCGTTGATTTAGTTCAAATATCTATGAGATAAACATTGTGAAAGATGTGTTCCTCCCCGTCCACCATATGCCAT
TTCTTTTTCATGTTTTTGCCTTCATCAATTCTCAATCATCCAATTCTCTTCAAAACCCATTGCAAAATCCCTCCCTTTTCACCTCCGAATTCCGTTTCAACAAGC
TTCAGGCTAAATTTGTAAGTTCGGTCGTCGTTTTCCACCTCAACTCCGACGTCTCTGCCACCGAGGACGCCGCATTCCGTTCCTGGATTTATCTCCTGTATTCAG
AACGAGAGAAAGGTCTAAGAAAGAAGCGAGTTTTTTGTTCAGAAGCTCACGCTGGTATTTGGGTCTTTTGTTTAGTATAAAGTTATAAACCCCGTCTAGAGTAGA
TGGAGATGAAGGAGACAAAACAAGAGAGAGAAAAAGGAAGAGGAAGAAAGAGTAGAGGAAGGGAGGAACGTTAAAAGAAATATATTTTCATCTGTAGACCCAAAA
AGCAAGTTGGAAACCCGAAAACCCCCAGAAATGAACAAAGGAAAACAAGACTGGTGACGTACAGCCAACAGACGTTTCTACTCAGCCCAACGCTTGAAATGAAAG
GAAAGAAAAAAACAGAATAGGCTTTGTTCATACTCTCTCTTGAGTTCTGATTCAGAAATTTGAGCTTTAAAAAATGTCCACATCGATGAACAACGGCAGCGATGA
AGAAACAACCCGAAAAAACGAACCAAAACCCGAGTCGGAGTACGTCAACCTCAAAGTGAATGGCCAGGATGGGAGCGAAGTGTATTTCAGGATTTCTAAGAAATC
CGAACTCAGCAAACTCATGTATTCTTACTGTAAAAGACAAGAGTTAGAGTTCAGTACCATTGTTTTTCTCGTGGACGGCCATCCCATTGCTGGAACCCAAACCGC
GGAAGAGCTGGGGTTGGAAGATGGAGATGAAATTGATGCCATGAAACACCACTACGGCGGCGGCGGCGGAGCAATCTGAGTTTTTCATTTCTGTGGAAAAATGGT
GATCAAGCGATCTCTGTCTTTTGGTTAAAACGGTGACGTTTGGTCTTAGTGTTAAATCTCATGTTTGTTTTATGTTTGCATTTTGTTTATATATATATATATAGC
AAAATCTATCCAATTTTTTTTAGTTCATTTAAGTTCTTGCTAATTTCATTTTCTTTCTGTGCTATCCATCAAAATTTCTCAAAAAGAATATATATATCAAGTGCC
CCTTATCTACATTTGGATGGATAGTATTGAAACTTTATCGAAAGTGACCTAGATGATGCCTATTTCCGACTAGTC
Protein sequenceShow/hide protein sequence
MSTSMNNGSDEETTRKNEPKPESEYVNLKVNGQDGSEVYFRISKKSELSKLMYSYCKRQELEFSTIVFLVDGHPIAGTQTAEELGLEDGDEIDAMKHHYGGGGGA
I