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Cmc05g0127341 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0127341
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr05:4643792..4644711
RNA-Seq ExpressionCmc05g0127341
SyntenyCmc05g0127341
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]2.8e-2245.32Show/hide
Query:  NSHAHQFGGNSSNQNGKRNNFNGCGRGRGRGNKPTCQVCGKYGHSALICYDRYNKEVAGNVNQNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTN
        +S+   +G N  + +G+R N N         N PTCQ+CGKYGHSAL+CY+R+NKE +  + Q+R  + +      +   F++TQ ++  ATP+TVVD N
Subjt:  NSHAHQFGGNSSNQNGKRNNFNGCGRGRGRGNKPTCQVCGKYGHSALICYDRYNKEVAGNVNQNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTN

Query:  WYVDSGATNHVTSDHSNLWNIDDYSGQGYGSSTAQRNTM
        WY+DSGATNHVT + SN+ N  +YSGQ YG  T  R T+
Subjt:  WYVDSGATNHVTSDHSNLWNIDDYSGQGYGSSTAQRNTM

KAA0057475.1 uncharacterized protein E6C27_scaffold280G003560 [Cucumis melo var. makuwa]5.1e-2493.75Show/hide
Query:  QNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTNWYVDSGATNHVTSDHSNLWNIDDYSG
        +NRGFNPNQNGKQI  DAFITTQKSSSLATPETVVDTN YVDSGATNHVTSDHSNLWNIDDYSG
Subjt:  QNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTNWYVDSGATNHVTSDHSNLWNIDDYSG

TYK05754.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]7.1e-2653.23Show/hide
Query:  HQF-GGNSSNQNGKRNNFN-GCGRGRGRGNKPTCQVCGKYGHSALICYDRYNKEVAGNVNQNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTNWY
        HQF G N +N  G+R  FN G GRG+GRGNKPTCQVC KYGHSAL+CY+R+NKE    + Q+RG   +   K  +    +T Q  +  AT +TV++ NWY
Subjt:  HQF-GGNSSNQNGKRNNFN-GCGRGRGRGNKPTCQVCGKYGHSALICYDRYNKEVAGNVNQNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTNWY

Query:  VDSGATNHVTSDHSNLWNIDDYSG
        +DSGATNH+T ++SNL N  +YSG
Subjt:  VDSGATNHVTSDHSNLWNIDDYSG

XP_016902197.1 PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]1.8e-2147.5Show/hide
Query:  FGGNSSNQNGKRNNFNGCGRGRGRGNKPTCQVCGKYGHSALICYDRYNKEVAGNVNQNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTNWYVDSG
        +G N  + +G+R N N         N PTCQ+CGKYGHSAL+CY+R+NKE +  + QNR  + +      +   F++TQ ++  ATP+TVVD NWY+DSG
Subjt:  FGGNSSNQNGKRNNFNGCGRGRGRGNKPTCQVCGKYGHSALICYDRYNKEVAGNVNQNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTNWYVDSG

Query:  ATNHVTSDHSNLWNIDDYSG
        ATNHVT + SN+ N  +YSG
Subjt:  ATNHVTSDHSNLWNIDDYSG

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]3.3e-2347.37Show/hide
Query:  FGGNSSNQNGKRNNFNGCGRGRGRGNKPTCQVCGKYGHSALICYDRYNKEVAGNVNQNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTNWYVDSG
        +G N  + +G+R N N         N PTCQ+CGKYGHSAL+CY+R+NKE +  + QNR  + +      +   F++TQ ++  ATP+TVVD NWY+DSG
Subjt:  FGGNSSNQNGKRNNFNGCGRGRGRGNKPTCQVCGKYGHSALICYDRYNKEVAGNVNQNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTNWYVDSG

Query:  ATNHVTSDHSNLWNIDDYSGQGYGSSTAQRNTM
        ATNHVT + SN+ N  +YSGQ YG  T  R T+
Subjt:  ATNHVTSDHSNLWNIDDYSGQGYGSSTAQRNTM

TrEMBL top hitse value%identityAlignment
A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X18.8e-2247.5Show/hide
Query:  FGGNSSNQNGKRNNFNGCGRGRGRGNKPTCQVCGKYGHSALICYDRYNKEVAGNVNQNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTNWYVDSG
        +G N  + +G+R N N         N PTCQ+CGKYGHSAL+CY+R+NKE +  + QNR  + +      +   F++TQ ++  ATP+TVVD NWY+DSG
Subjt:  FGGNSSNQNGKRNNFNGCGRGRGRGNKPTCQVCGKYGHSALICYDRYNKEVAGNVNQNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTNWYVDSG

Query:  ATNHVTSDHSNLWNIDDYSG
        ATNHVT + SN+ N  +YSG
Subjt:  ATNHVTSDHSNLWNIDDYSG

A0A1S4E1V2 uncharacterized protein LOC107991581 isoform X31.6e-2347.37Show/hide
Query:  FGGNSSNQNGKRNNFNGCGRGRGRGNKPTCQVCGKYGHSALICYDRYNKEVAGNVNQNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTNWYVDSG
        +G N  + +G+R N N         N PTCQ+CGKYGHSAL+CY+R+NKE +  + QNR  + +      +   F++TQ ++  ATP+TVVD NWY+DSG
Subjt:  FGGNSSNQNGKRNNFNGCGRGRGRGNKPTCQVCGKYGHSALICYDRYNKEVAGNVNQNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTNWYVDSG

Query:  ATNHVTSDHSNLWNIDDYSGQGYGSSTAQRNTM
        ATNHVT + SN+ N  +YSGQ YG  T  R T+
Subjt:  ATNHVTSDHSNLWNIDDYSGQGYGSSTAQRNTM

A0A5A7SIT7 Uncharacterized protein1.4e-2245.32Show/hide
Query:  NSHAHQFGGNSSNQNGKRNNFNGCGRGRGRGNKPTCQVCGKYGHSALICYDRYNKEVAGNVNQNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTN
        +S+   +G N  + +G+R N N         N PTCQ+CGKYGHSAL+CY+R+NKE +  + Q+R  + +      +   F++TQ ++  ATP+TVVD N
Subjt:  NSHAHQFGGNSSNQNGKRNNFNGCGRGRGRGNKPTCQVCGKYGHSALICYDRYNKEVAGNVNQNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTN

Query:  WYVDSGATNHVTSDHSNLWNIDDYSGQGYGSSTAQRNTM
        WY+DSGATNHVT + SN+ N  +YSGQ YG  T  R T+
Subjt:  WYVDSGATNHVTSDHSNLWNIDDYSGQGYGSSTAQRNTM

A0A5D3C373 Retrovirus-related Pol polyprotein from transposon TNT 1-943.5e-2653.23Show/hide
Query:  HQF-GGNSSNQNGKRNNFN-GCGRGRGRGNKPTCQVCGKYGHSALICYDRYNKEVAGNVNQNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTNWY
        HQF G N +N  G+R  FN G GRG+GRGNKPTCQVC KYGHSAL+CY+R+NKE    + Q+RG   +   K  +    +T Q  +  AT +TV++ NWY
Subjt:  HQF-GGNSSNQNGKRNNFN-GCGRGRGRGNKPTCQVCGKYGHSALICYDRYNKEVAGNVNQNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTNWY

Query:  VDSGATNHVTSDHSNLWNIDDYSG
        +DSGATNH+T ++SNL N  +YSG
Subjt:  VDSGATNHVTSDHSNLWNIDDYSG

A0A5D3E3L7 Uncharacterized protein2.5e-2493.75Show/hide
Query:  QNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTNWYVDSGATNHVTSDHSNLWNIDDYSG
        +NRGFNPNQNGKQI  DAFITTQKSSSLATPETVVDTN YVDSGATNHVTSDHSNLWNIDDYSG
Subjt:  QNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTNWYVDSGATNHVTSDHSNLWNIDDYSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACTAGAGAACTCTCATGCTCATCAGTTTGGTGGAAATAGTTCTAACCAAAATGGAAAGCGAAACAATTTTAATGGCTGCGGACGTGGTCGAGGAAGAGGTAACAA
ACCTACATGTCAGGTATGTGGAAAATATGGTCACTCAGCTTTGATTTGCTATGATAGATACAATAAAGAAGTTGCTGGAAATGTAAATCAGAATAGAGGATTTAATCCAA
ATCAGAATGGAAAACAAATTCATGCTGATGCCTTTATTACCACCCAGAAATCATCTTCATTAGCCACACCTGAGACTGTAGTTGATACAAACTGGTATGTCGATAGTGGT
GCTACAAATCATGTTACATCTGATCATTCAAATCTGTGGAATATTGATGATTATTCAGGCCAAGGATATGGGTCGAGTACTGCTCAAAGGAACACTATGTGA
mRNA sequenceShow/hide mRNA sequence
GGGCAATGTTATCTCAAATCCCTCTGTCAATATAGCGCAAAATAGACTGAATGACACTAGAGAACTCTCATGCTCATCAGTTTGGTGGAAATAGTTCTAACCAAAATGGA
AAGCGAAACAATTTTAATGGCTGCGGACGTGGTCGAGGAAGAGGTAACAAACCTACATGTCAGGTATGTGGAAAATATGGTCACTCAGCTTTGATTTGCTATGATAGATA
CAATAAAGAAGTTGCTGGAAATGTAAATCAGAATAGAGGATTTAATCCAAATCAGAATGGAAAACAAATTCATGCTGATGCCTTTATTACCACCCAGAAATCATCTTCAT
TAGCCACACCTGAGACTGTAGTTGATACAAACTGGTATGTCGATAGTGGTGCTACAAATCATGTTACATCTGATCATTCAAATCTGTGGAATATTGATGATTATTCAGGC
CAAGGATATGGGTCGAGTACTGCTCAAAGGAACACTATGTGATGGCTTATATCATCTTGAAGGTGTGGCTGTGAAGTCGGTTGGTGAGTTGGAGCATAGTGATAGTAGTA
AGAAAAGCACATAAATAATGCATCAATTTTAGTGTTGTCTGAAAAAGTCAGTAGTAGTATTGGTGCTTCCAAAACTGTTTGGCATAGACGTCTGGGTCACCCATCTATGA
AGATTTTAAATTCTTTACTTAAAGATTGTAATCTGCCTGTTAATGATAATGAAG
Protein sequenceShow/hide protein sequence
MTLENSHAHQFGGNSSNQNGKRNNFNGCGRGRGRGNKPTCQVCGKYGHSALICYDRYNKEVAGNVNQNRGFNPNQNGKQIHADAFITTQKSSSLATPETVVDTNWYVDSG
ATNHVTSDHSNLWNIDDYSGQGYGSSTAQRNTM