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Cmc05g0127351 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0127351
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr05:4645585..4647846
RNA-Seq ExpressionCmc05g0127351
SyntenyCmc05g0127351
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037647.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.4e-1865.56Show/hide
Query:  NATDISHI-SPSSSSSPSPLLISRSDNLSASFRPNTIPLPSHPMTTQAKAGIFKPKTLLSTSLIDWSLTKPTRVKDALATPSWKQAMNDE
        +  D SH+ S SSSSS S L I   D L+ + R NTI LPSHPMTT+AKA IF  K LLSTSLIDWSL + TRVKDALATPSWK +MN+E
Subjt:  NATDISHI-SPSSSSSPSPLLISRSDNLSASFRPNTIPLPSHPMTTQAKAGIFKPKTLLSTSLIDWSLTKPTRVKDALATPSWKQAMNDE
KAA0045871.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.1e-3470Show/hide
Query:  SPFAHYPTSPLTQSPPSSSSQPSIRPTSSSIDSFSLSLSNLNATDISHISPSSSSSPSPLLISRSDNLSASFRPNTIPLPSHPMTTQAKAGIFKPKTLLS
        SP AHYPTS   QSP S  + PS  PTSS ID F L+ SNLNA D S +S SSSSS SPL IS S+ L  +F PNTIPLPSHPMTT+AKAGIFKPKTLLS
Subjt:  SPFAHYPTSPLTQSPPSSSSQPSIRPTSSSIDSFSLSLSNLNATDISHISPSSSSSPSPLLISRSDNLSASFRPNTIPLPSHPMTTQAKAGIFKPKTLLS

Query:  TSLIDWSLTKPTRVKDALATPSWKQAMNDE
        TSLID SLT+ T+VKD LATPSWK+AM++E
Subjt:  TSLIDWSLTKPTRVKDALATPSWKQAMNDE
KAA0054967.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.8e-1991.07Show/hide
Query:  MTTQAKAGIFKPKTLLSTSLIDWSLTKPTRVKDALATPSWKQAMNDEYNALVKNQT
        MTTQAKAGIFKP TLLSTSLIDWSLTKPTRVKDAL TPSWKQA ++EYNALVKNQT
Subjt:  MTTQAKAGIFKPKTLLSTSLIDWSLTKPTRVKDALATPSWKQAMNDEYNALVKNQT
KAA0057476.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.5e-8696.7Show/hide
Query:  MTPISLPQIPAHYHHVLIQLPLLLPHQLIQAQLFPLHLPTPTSSPFAHYPTSPLTQSPPSSSSQPSIRPTSSSIDSFSLSLSNLNATDISHISPSSSSSP
        MTPISLPQIPAHYHHVLIQLPLLLPHQLIQAQLFPLHLPTPT SPF HYPTSPL QSPPSSSSQPSIRPTSSSIDSFSLSLSNLNATDISHISPSSSSSP
Subjt:  MTPISLPQIPAHYHHVLIQLPLLLPHQLIQAQLFPLHLPTPTSSPFAHYPTSPLTQSPPSSSSQPSIRPTSSSIDSFSLSLSNLNATDISHISPSSSSSP

Query:  SPLLISRSDNLSASFRPNTIPLPSHPMTTQAKAGIFKPKTLLSTSLIDWSLTKPTRVKDALATPSWKQAMNDEYNALVKNQT
        SPLLISRSDNLSASFRPNTIPLPS PMTTQAKAGIFKPKTLLST LIDWSLT+PTRVKDALATPSWKQAMNDEYNALVKNQT
Subjt:  SPLLISRSDNLSASFRPNTIPLPSHPMTTQAKAGIFKPKTLLSTSLIDWSLTKPTRVKDALATPSWKQAMNDEYNALVKNQT
TYK13717.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.1e-3470Show/hide
Query:  SPFAHYPTSPLTQSPPSSSSQPSIRPTSSSIDSFSLSLSNLNATDISHISPSSSSSPSPLLISRSDNLSASFRPNTIPLPSHPMTTQAKAGIFKPKTLLS
        SP AHYPTS   QSP S  + PS  PTSS ID F L+ SNLNA D S +S SSSSS SPL IS S+ L  +F PNTIPLPSHPMTT+AKAGIFKPKTLLS
Subjt:  SPFAHYPTSPLTQSPPSSSSQPSIRPTSSSIDSFSLSLSNLNATDISHISPSSSSSPSPLLISRSDNLSASFRPNTIPLPSHPMTTQAKAGIFKPKTLLS

Query:  TSLIDWSLTKPTRVKDALATPSWKQAMNDE
        TSLID SLT+ T+VKD LATPSWK+AM++E
Subjt:  TSLIDWSLTKPTRVKDALATPSWKQAMNDE
TrEMBL top hitse value%identityAlignment
A0A5A7T7W3 Putative mitochondrial protein1.2e-1865.56Show/hide
Query:  NATDISHI-SPSSSSSPSPLLISRSDNLSASFRPNTIPLPSHPMTTQAKAGIFKPKTLLSTSLIDWSLTKPTRVKDALATPSWKQAMNDE
        +  D SH+ S SSSSS S L I   D L+ + R NTI LPSHPMTT+AKA IF  K LLSTSLIDWSL + TRVKDALATPSWK +MN+E
Subjt:  NATDISHI-SPSSSSSPSPLLISRSDNLSASFRPNTIPLPSHPMTTQAKAGIFKPKTLLSTSLIDWSLTKPTRVKDALATPSWKQAMNDE
A0A5A7TWM4 Putative mitochondrial protein1.5e-3470Show/hide
Query:  SPFAHYPTSPLTQSPPSSSSQPSIRPTSSSIDSFSLSLSNLNATDISHISPSSSSSPSPLLISRSDNLSASFRPNTIPLPSHPMTTQAKAGIFKPKTLLS
        SP AHYPTS   QSP S  + PS  PTSS ID F L+ SNLNA D S +S SSSSS SPL IS S+ L  +F PNTIPLPSHPMTT+AKAGIFKPKTLLS
Subjt:  SPFAHYPTSPLTQSPPSSSSQPSIRPTSSSIDSFSLSLSNLNATDISHISPSSSSSPSPLLISRSDNLSASFRPNTIPLPSHPMTTQAKAGIFKPKTLLS

Query:  TSLIDWSLTKPTRVKDALATPSWKQAMNDE
        TSLID SLT+ T+VKD LATPSWK+AM++E
Subjt:  TSLIDWSLTKPTRVKDALATPSWKQAMNDE
A0A5D3CP94 Putative mitochondrial protein1.5e-3470Show/hide
Query:  SPFAHYPTSPLTQSPPSSSSQPSIRPTSSSIDSFSLSLSNLNATDISHISPSSSSSPSPLLISRSDNLSASFRPNTIPLPSHPMTTQAKAGIFKPKTLLS
        SP AHYPTS   QSP S  + PS  PTSS ID F L+ SNLNA D S +S SSSSS SPL IS S+ L  +F PNTIPLPSHPMTT+AKAGIFKPKTLLS
Subjt:  SPFAHYPTSPLTQSPPSSSSQPSIRPTSSSIDSFSLSLSNLNATDISHISPSSSSSPSPLLISRSDNLSASFRPNTIPLPSHPMTTQAKAGIFKPKTLLS

Query:  TSLIDWSLTKPTRVKDALATPSWKQAMNDE
        TSLID SLT+ T+VKD LATPSWK+AM++E
Subjt:  TSLIDWSLTKPTRVKDALATPSWKQAMNDE
A0A5D3DGN1 Putative mitochondrial protein2.3e-1991.07Show/hide
Query:  MTTQAKAGIFKPKTLLSTSLIDWSLTKPTRVKDALATPSWKQAMNDEYNALVKNQT
        MTTQAKAGIFKP TLLSTSLIDWSLTKPTRVKDAL TPSWKQA ++EYNALVKNQT
Subjt:  MTTQAKAGIFKPKTLLSTSLIDWSLTKPTRVKDALATPSWKQAMNDEYNALVKNQT
A0A5D3E2Q4 Putative mitochondrial protein1.7e-8696.7Show/hide
Query:  MTPISLPQIPAHYHHVLIQLPLLLPHQLIQAQLFPLHLPTPTSSPFAHYPTSPLTQSPPSSSSQPSIRPTSSSIDSFSLSLSNLNATDISHISPSSSSSP
        MTPISLPQIPAHYHHVLIQLPLLLPHQLIQAQLFPLHLPTPT SPF HYPTSPL QSPPSSSSQPSIRPTSSSIDSFSLSLSNLNATDISHISPSSSSSP
Subjt:  MTPISLPQIPAHYHHVLIQLPLLLPHQLIQAQLFPLHLPTPTSSPFAHYPTSPLTQSPPSSSSQPSIRPTSSSIDSFSLSLSNLNATDISHISPSSSSSP

Query:  SPLLISRSDNLSASFRPNTIPLPSHPMTTQAKAGIFKPKTLLSTSLIDWSLTKPTRVKDALATPSWKQAMNDEYNALVKNQT
        SPLLISRSDNLSASFRPNTIPLPS PMTTQAKAGIFKPKTLLST LIDWSLT+PTRVKDALATPSWKQAMNDEYNALVKNQT
Subjt:  SPLLISRSDNLSASFRPNTIPLPSHPMTTQAKAGIFKPKTLLSTSLIDWSLTKPTRVKDALATPSWKQAMNDEYNALVKNQT
SwissProt top hitse value%identityAlignment
Q94HW2 Retrovirus-related Pol polyprotein from transposon RE11.6e-0430.12Show/hide
Query:  SSPFAHYPTSPLTQSPPSSSSQPSIRPTSSSIDSFSLSLSNLN----------ATDISHISPSSSSSPSPLLISRSDNLSAS-----FRP----------
        SS  + +P+SP   +P  +  QP+ +PT +   + S   ++ N          A  +S  + SSSSSPSP   + S + S +       P          
Subjt:  SSPFAHYPTSPLTQSPPSSSSQPSIRPTSSSIDSFSLSLSNLN----------ATDISHISPSSSSSPSPLLISRSDNLSAS-----FRP----------

Query:  -NTIPLPSHPMTTQAKAGIFKPKTLLSTSLIDWSLTKPTRVKDALATPSWKQAMNDEYNALVKNQT
         N  PL +H M T+AKAGI KP    S ++   + ++P     AL    W+ AM  E NA + N T
Subjt:  -NTIPLPSHPMTTQAKAGIFKPKTLLSTSLIDWSLTKPTRVKDALATPSWKQAMNDEYNALVKNQT
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCCAATTTCACTTCCTCAAATCCCAGCCCATTATCACCATGTACTAATCCAGCTGCCACTTCTTCTTCCTCACCAGCTGATCCAGGCCCAGTTATTTCCTCTCCA
TTTGCCCACTCCAACCTCGAGTCCTTTCGCCCACTATCCTACATCTCCACTGACCCAATCTCCTCCTTCATCATCGTCCCAACCTTCCATCCGTCCTACTTCTTCATCGA
TTGACTCTTTCTCCCTCAGCCTGTCTAATTTAAATGCTACCGACATATCCCATATTTCTCCTTCTTCTTCCTCGTCTCCAAGTCCTTTGTTGATCTCCCGTTCTGACAAC
TTATCTGCCAGTTTCCGCCCAAATACCATACCTTTACCCTCTCATCCTATGACTACTCAAGCTAAAGCGGGTATATTCAAACCAAAAACCCTTCTCTCCACGTCCTTGAT
TGACTGGTCACTCACAAAGCCGACGAGGGTTAAGGATGCTTTGGCTACTCCCTCTTGGAAACAAGCGATGAACGATGAGTATAATGCTCTAGTCAAAAATCAAACATAA
mRNA sequenceShow/hide mRNA sequence
ATGACCCCAATTTCACTTCCTCAAATCCCAGCCCATTATCACCATGTACTAATCCAGCTGCCACTTCTTCTTCCTCACCAGCTGATCCAGGCCCAGTTATTTCCTCTCCA
TTTGCCCACTCCAACCTCGAGTCCTTTCGCCCACTATCCTACATCTCCACTGACCCAATCTCCTCCTTCATCATCGTCCCAACCTTCCATCCGTCCTACTTCTTCATCGA
TTGACTCTTTCTCCCTCAGCCTGTCTAATTTAAATGCTACCGACATATCCCATATTTCTCCTTCTTCTTCCTCGTCTCCAAGTCCTTTGTTGATCTCCCGTTCTGACAAC
TTATCTGCCAGTTTCCGCCCAAATACCATACCTTTACCCTCTCATCCTATGACTACTCAAGCTAAAGCGGGTATATTCAAACCAAAAACCCTTCTCTCCACGTCCTTGAT
TGACTGGTCACTCACAAAGCCGACGAGGGTTAAGGATGCTTTGGCTACTCCCTCTTGGAAACAAGCGATGAACGATGAGTATAATGCTCTAGTCAAAAATCAAACATAAC
AGCTAGTTCCACCATCTTCAGATTTGAATGTAATTGGCAGTAAGTGGGCTTTTAGAATTAAGAGGAACTCAGATGGGACGATCCAACGGTATAAGGCACGACTTGTTGCT
AAGAGATTTCACCAAAACCCGGGTGTTGATTTCTTTGAAACATTCAGTTTGATCGTTAAGGCTACAACCATTCGACTAGTACTCAGCTTGGTCGTTTCGAAAGGTTGCTT
TCTCTGATGCCGATTGGGCTTCGAATATTGATGATCGCAAGTCTGTTGCTGCATATTGTGTTTTTGTGGGTAATAATTTGGATTCTTGGTCTTCAAAGAAACAAAATGTT
GTAGCTCGTTCAAGCACCGAATCAGAATATCGTGCATTAGCCCATGCTACATCAGAAATTGTTTGGCTCACACAACTACTTTCTGAACTCTCTATTTCGGTTCATCCTAA
ACCTATTTTAATATTAATGTAGGGGCGCTTGCAACCAATCCTGTCTTTCATGCTAGAACCAAGCACATTGAGATAGATGTGCATTTCGTTCATGATCAAGTTCTTTGCGG
TGCACTTGAAGTTCGATATATACCTTCATCAGATCAATTGGCAGATTGTCTTACAAAGCCTCTTACTCATTCTCATTTTTACTATTTGAGGTCCAAACTCGGGGTAATTG
AATTACCCTCTCGTTTGAGGGGGAATGTCAGAGAAGGTTACCACACAAGCAGTACACATGGATCCTCAACAAATGCCACCTCAGCACCATCACAGAATTATCAAAAGATT
CCAAAACATTCAAATTGTTAGAAATTAGTTGAGGAAGATTTCTTTACCAATGACTTGCTTACACTTGTGTAAATTGTATTGGGTCTTTACTATTATTTTATTACTTACCT
TTCCAACATTCTAGGGTTTACCATTGTATAAATATATCATTATCTTCATTTATTAAGACAAGAGAGAAAAAGAGTAA
Protein sequenceShow/hide protein sequence
MTPISLPQIPAHYHHVLIQLPLLLPHQLIQAQLFPLHLPTPTSSPFAHYPTSPLTQSPPSSSSQPSIRPTSSSIDSFSLSLSNLNATDISHISPSSSSSPSPLLISRSDN
LSASFRPNTIPLPSHPMTTQAKAGIFKPKTLLSTSLIDWSLTKPTRVKDALATPSWKQAMNDEYNALVKNQT