| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0031937.1 retroelement pol polyprotein-like [Cucumis melo var. makuwa] | 2.0e-127 | 99.55 | Show/hide |
Query: QDKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQRIDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYG
+DKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQRIDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYG
Subjt: QDKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQRIDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYG
Query: KAIKQVRSDNAPELKFTTFFEQKGVIHQYSCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPD
KAIKQVRSDNAPELKFTTFFEQKGVIHQYSCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPD
Subjt: KAIKQVRSDNAPELKFTTFFEQKGVIHQYSCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPD
Query: YNSLKVFGSLCYASSLPYNRSKF
YNSLKVFGSLCYASSLPYNRSKF
Subjt: YNSLKVFGSLCYASSLPYNRSKF
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| KAA0042148.1 putative retroelement pol polyprotein [Cucumis melo var. makuwa] | 3.0e-75 | 58.03 | Show/hide |
Query: KKIGSAKLFQGLYILDQP--TYFPSICAV------------------------------TTNKAS------LWHQR-------------------IDIWG
++IGSAKLFQGLYILDQ +P + + T NK S L QR + IWG
Subjt: KKIGSAKLFQGLYILDQP--TYFPSICAV------------------------------TTNKAS------LWHQR-------------------IDIWG
Query: PFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPELKFTTFFEQKGVIHQYSCVQCPQQNSVVERKHQHIL
PFST+T++GY YFLTIVDDAT YT +FMLK SDV+ I+PQFFKLIETQ GK IKQ+RSDNAPELKFT FFEQK +C QQNS VERKHQHIL
Subjt: PFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPELKFTTFFEQKGVIHQYSCVQCPQQNSVVERKHQHIL
Query: NTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPDYNSLKVFGSLCYASSLPYNRSKF
NTAR YFQSQVPL FWG+CILTAIYLINRTPS LLQW+ PFQKLNNT+PDY SL++FGSLCYASSL +NRSKF
Subjt: NTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPDYNSLKVFGSLCYASSLPYNRSKF
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| KAA0068025.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] | 1.2e-108 | 70.41 | Show/hide |
Query: SSLSVQFFTDICIIQDKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQR------------------------------------------
SS S T + DKYTSKKIGSAKLFQGLYILDQPT FPSICAVT NKASLWHQR
Subjt: SSLSVQFFTDICIIQDKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQR------------------------------------------
Query: ---------------IDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPELKFTTFFEQKGVIHQY
+DIWGPFSTETYS YSYFLTIVDDATRYTWVFMLKLKSDVISIIP FFKLIETQYGKAIK+VRSDNA +LKFTTFFEQKGVIHQY
Subjt: ---------------IDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPELKFTTFFEQKGVIHQY
Query: SCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPDYNSLKVFGSLCYASSLPYNRSKF
SCVQ PQQNSVVE+KHQHILNTARALYFQSQVPLNFWGDCI+TA+YLI+RTPS+LLQWK PFQKLNN +PDYNSLKVFGSLCYASSLP+N SKF
Subjt: SCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPDYNSLKVFGSLCYASSLPYNRSKF
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| TYK16758.1 Copia protein [Cucumis melo var. makuwa] | 1.7e-126 | 99.1 | Show/hide |
Query: QDKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQRIDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYG
+DKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQRIDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYG
Subjt: QDKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQRIDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYG
Query: KAIKQVRSDNAPELKFTTFFEQKGVIHQYSCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPD
KAIKQVRSDNAPELKFTTFFEQKGVIHQYSCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKS FQKLNNTIPD
Subjt: KAIKQVRSDNAPELKFTTFFEQKGVIHQYSCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPD
Query: YNSLKVFGSLCYASSLPYNRSKF
YNSLKVFGSLCYASSLPYNRSKF
Subjt: YNSLKVFGSLCYASSLPYNRSKF
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| TYK18103.1 Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa] | 1.2e-108 | 70.41 | Show/hide |
Query: SSLSVQFFTDICIIQDKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQR------------------------------------------
SS S T + DKYTSKKIGSAKLFQGLYILDQPT FPSICAVT NKASLWHQR
Subjt: SSLSVQFFTDICIIQDKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQR------------------------------------------
Query: ---------------IDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPELKFTTFFEQKGVIHQY
+DIWGPFSTETYS YSYFLTIVDDATRYTWVFMLKLKSDVISIIP FFKLIETQYGKAIK+VRSDNA +LKFTTFFEQKGVIHQY
Subjt: ---------------IDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPELKFTTFFEQKGVIHQY
Query: SCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPDYNSLKVFGSLCYASSLPYNRSKF
SCVQ PQQNSVVE+KHQHILNTARALYFQSQVPLNFWGDCI+TA+YLI+RTPS+LLQWK PFQKLNN +PDYNSLKVFGSLCYASSLP+N SKF
Subjt: SCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPDYNSLKVFGSLCYASSLPYNRSKF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SRC2 Retroelement pol polyprotein-like | 9.5e-128 | 99.55 | Show/hide |
Query: QDKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQRIDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYG
+DKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQRIDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYG
Subjt: QDKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQRIDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYG
Query: KAIKQVRSDNAPELKFTTFFEQKGVIHQYSCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPD
KAIKQVRSDNAPELKFTTFFEQKGVIHQYSCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPD
Subjt: KAIKQVRSDNAPELKFTTFFEQKGVIHQYSCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPD
Query: YNSLKVFGSLCYASSLPYNRSKF
YNSLKVFGSLCYASSLPYNRSKF
Subjt: YNSLKVFGSLCYASSLPYNRSKF
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| A0A5A7VQN7 Cysteine-rich RLK (Receptor-like protein kinase) 8 | 5.8e-109 | 70.41 | Show/hide |
Query: SSLSVQFFTDICIIQDKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQR------------------------------------------
SS S T + DKYTSKKIGSAKLFQGLYILDQPT FPSICAVT NKASLWHQR
Subjt: SSLSVQFFTDICIIQDKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQR------------------------------------------
Query: ---------------IDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPELKFTTFFEQKGVIHQY
+DIWGPFSTETYS YSYFLTIVDDATRYTWVFMLKLKSDVISIIP FFKLIETQYGKAIK+VRSDNA +LKFTTFFEQKGVIHQY
Subjt: ---------------IDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPELKFTTFFEQKGVIHQY
Query: SCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPDYNSLKVFGSLCYASSLPYNRSKF
SCVQ PQQNSVVE+KHQHILNTARALYFQSQVPLNFWGDCI+TA+YLI+RTPS+LLQWK PFQKLNN +PDYNSLKVFGSLCYASSLP+N SKF
Subjt: SCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPDYNSLKVFGSLCYASSLPYNRSKF
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| A0A5D3CZP1 Copia protein | 8.1e-127 | 99.1 | Show/hide |
Query: QDKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQRIDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYG
+DKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQRIDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYG
Subjt: QDKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQRIDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYG
Query: KAIKQVRSDNAPELKFTTFFEQKGVIHQYSCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPD
KAIKQVRSDNAPELKFTTFFEQKGVIHQYSCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKS FQKLNNTIPD
Subjt: KAIKQVRSDNAPELKFTTFFEQKGVIHQYSCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPD
Query: YNSLKVFGSLCYASSLPYNRSKF
YNSLKVFGSLCYASSLPYNRSKF
Subjt: YNSLKVFGSLCYASSLPYNRSKF
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| A0A5D3D1N3 Cysteine-rich RLK (Receptor-like protein kinase) 8 | 5.8e-109 | 70.41 | Show/hide |
Query: SSLSVQFFTDICIIQDKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQR------------------------------------------
SS S T + DKYTSKKIGSAKLFQGLYILDQPT FPSICAVT NKASLWHQR
Subjt: SSLSVQFFTDICIIQDKYTSKKIGSAKLFQGLYILDQPTYFPSICAVTTNKASLWHQR------------------------------------------
Query: ---------------IDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPELKFTTFFEQKGVIHQY
+DIWGPFSTETYS YSYFLTIVDDATRYTWVFMLKLKSDVISIIP FFKLIETQYGKAIK+VRSDNA +LKFTTFFEQKGVIHQY
Subjt: ---------------IDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPELKFTTFFEQKGVIHQY
Query: SCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPDYNSLKVFGSLCYASSLPYNRSKF
SCVQ PQQNSVVE+KHQHILNTARALYFQSQVPLNFWGDCI+TA+YLI+RTPS+LLQWK PFQKLNN +PDYNSLKVFGSLCYASSLP+N SKF
Subjt: SCVQCPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPDYNSLKVFGSLCYASSLPYNRSKF
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| A0A5D3DT02 Putative retroelement pol polyprotein | 1.4e-75 | 58.03 | Show/hide |
Query: KKIGSAKLFQGLYILDQP--TYFPSICAV------------------------------TTNKAS------LWHQR-------------------IDIWG
++IGSAKLFQGLYILDQ +P + + T NK S L QR + IWG
Subjt: KKIGSAKLFQGLYILDQP--TYFPSICAV------------------------------TTNKAS------LWHQR-------------------IDIWG
Query: PFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPELKFTTFFEQKGVIHQYSCVQCPQQNSVVERKHQHIL
PFST+T++GY YFLTIVDDAT YT +FMLK SDV+ I+PQFFKLIETQ GK IKQ+RSDNAPELKFT FFEQK +C QQNS VERKHQHIL
Subjt: PFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPELKFTTFFEQKGVIHQYSCVQCPQQNSVVERKHQHIL
Query: NTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPDYNSLKVFGSLCYASSLPYNRSKF
NTAR YFQSQVPL FWG+CILTAIYLINRTPS LLQW+ PFQKLNNT+PDY SL++FGSLCYASSL +NRSKF
Subjt: NTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPDYNSLKVFGSLCYASSLPYNRSKF
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 3.7e-20 | 32.04 | Show/hide |
Query: KASLWHQRIDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPEL---KFTTFFEQKGVIHQYSCVQ
K L+ D+ GP + T +YF+ VD T Y +++K KSDV S+ F E + + + DN E + F +KG+ + +
Subjt: KASLWHQRIDIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPEL---KFTTFFEQKGVIHQYSCVQ
Query: CPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLL--QWKSPFQKLNNTIPDYNSLKVFGSLCY
PQ N V ER + I AR + +++ +FWG+ +LTA YLINR PS+ L K+P++ +N P L+VFG+ Y
Subjt: CPQQNSVVERKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLL--QWKSPFQKLNNTIPDYNSLKVFGSLCY
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.5e-29 | 35.56 | Show/hide |
Query: DIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPEL---KFTTFFEQKGVIHQYSCVQCPQQNSVVE
D+ GP E+ G YF+T +DDA+R WV++LK K V + +F L+E + G+ +K++RSDN E +F + G+ H+ + PQ N V E
Subjt: DIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPEL---KFTTFFEQKGVIHQYSCVQCPQQNSVVE
Query: RKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPDYNSLKVFGSLCYASSLPYNRSK
R ++ I+ R++ +++P +FWG+ + TA YLINR+PS L ++ P + N Y+ LKVFG +A R+K
Subjt: RKHQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPDYNSLKVFGSLCYASSLPYNRSK
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| P47024 Transposon Ty4-J Gag-Pol polyprotein | 4.3e-08 | 26.85 | Show/hide |
Query: IDIWGPFSTETYSGYSYFLTIVDDATRY--TWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPEL---KFTTFFEQKGVIHQYSCVQCPQQNS
+DI+GP S+ Y L +VD+ TRY T K +++ + + + +ETQ+ + ++++ SD E + +F KG+ H + Q N
Subjt: IDIWGPFSTETYSGYSYFLTIVDDATRY--TWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPEL---KFTTFFEQKGVIHQYSCVQCPQQNS
Query: VVERKHQHILNTARALYFQSQVPLNFWGDCILTAI----YLINRTPSKL
ER + I+ A L QS + + FW + +A YL +++ KL
Subjt: VVERKHQHILNTARALYFQSQVPLNFWGDCILTAI----YLINRTPSKL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 8.0e-31 | 39.33 | Show/hide |
Query: DIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPE-LKFTTFFEQKGVIHQYSCVQCPQQNSVVERK
D+W ++ Y Y++ VD TRYTW++ LK KS V F L+E ++ I SDN E + +F Q G+ H S P+ N + ERK
Subjt: DIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPE-LKFTTFFEQKGVIHQYSCVQCPQQNSVVERK
Query: HQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPDYNSLKVFGSLCYASSLPYNRSK
H+HI+ T L + +P +W A+YLINR P+ LLQ +SPFQKL T P+Y+ L+VFG CY PYN+ K
Subjt: HQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPDYNSLKVFGSLCYASSLPYNRSK
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 5.7e-29 | 39.33 | Show/hide |
Query: DIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPE-LKFTTFFEQKGVIHQYSCVQCPQQNSVVERK
D+W + Y Y++ VD TRYTW++ LK KS V F L+E ++ I + SDN E + + Q G+ H S P+ N + ERK
Subjt: DIWGPFSTETYSGYSYFLTIVDDATRYTWVFMLKLKSDVISIIPQFFKLIETQYGKAIKQVRSDNAPE-LKFTTFFEQKGVIHQYSCVQCPQQNSVVERK
Query: HQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPDYNSLKVFGSLCYASSLPYNRSK
H+HI+ L + VP +W A+YLINR P+ LLQ +SPFQKL P+Y LKVFG CY PYNR K
Subjt: HQHILNTARALYFQSQVPLNFWGDCILTAIYLINRTPSKLLQWKSPFQKLNNTIPDYNSLKVFGSLCYASSLPYNRSK
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