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Cmc05g0129091 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0129091
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRNase H domain-containing protein
Genome locationCMiso1.1chr05:6830508..6834825
RNA-Seq ExpressionCmc05g0129091
SyntenyCmc05g0129091
Gene Ontology termsGO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031982.1 hypothetical protein E6C27_scaffold134G00730 [Cucumis melo var. makuwa]3.2e-3086.84Show/hide
Query:  MDVACSPNNKGNGYGVVLRNDKGEIVVAQAFCRGESFLVEASKIMVIMFGLHLVEGLGCFEVWVQSDAEVVVKKTK
        +DVACSPNNKGNGYGVVLRNDKGEIV+AQAFCRGESFLVEA KIM IMFGLHLVEGLGCFEVWVQSDAE+  +K +
Subjt:  MDVACSPNNKGNGYGVVLRNDKGEIVVAQAFCRGESFLVEASKIMVIMFGLHLVEGLGCFEVWVQSDAEVVVKKTK

ONI12089.1 hypothetical protein PRUPE_4G143500 [Prunus persica]8.7e-0432.89Show/hide
Query:  MDVACSPNNKGNGYGVVLRNDKGEIVVAQAFCRGESFLVEASKIMVIMFGLHLVEGLGCFEVWVQSDAEVVVKKTK
        +D A  P     G G V+RNDKGE++ A A     +   + ++IM  +FG+      GC  + ++SD++ VV   K
Subjt:  MDVACSPNNKGNGYGVVLRNDKGEIVVAQAFCRGESFLVEASKIMVIMFGLHLVEGLGCFEVWVQSDAEVVVKKTK

TrEMBL top hitse value%identityAlignment
A0A251PKK0 RNase H domain-containing protein4.2e-0432.89Show/hide
Query:  MDVACSPNNKGNGYGVVLRNDKGEIVVAQAFCRGESFLVEASKIMVIMFGLHLVEGLGCFEVWVQSDAEVVVKKTK
        +D A  P     G G V+RNDKGE++ A A     +   + ++IM  +FG+      GC  + ++SD++ VV   K
Subjt:  MDVACSPNNKGNGYGVVLRNDKGEIVVAQAFCRGESFLVEASKIMVIMFGLHLVEGLGCFEVWVQSDAEVVVKKTK

A0A5A7SLR6 RNase H domain-containing protein1.5e-3086.84Show/hide
Query:  MDVACSPNNKGNGYGVVLRNDKGEIVVAQAFCRGESFLVEASKIMVIMFGLHLVEGLGCFEVWVQSDAEVVVKKTK
        +DVACSPNNKGNGYGVVLRNDKGEIV+AQAFCRGESFLVEA KIM IMFGLHLVEGLGCFEVWVQSDAE+  +K +
Subjt:  MDVACSPNNKGNGYGVVLRNDKGEIVVAQAFCRGESFLVEASKIMVIMFGLHLVEGLGCFEVWVQSDAEVVVKKTK

M5WZF6 RNase H domain-containing protein (Fragment)4.2e-0432.89Show/hide
Query:  MDVACSPNNKGNGYGVVLRNDKGEIVVAQAFCRGESFLVEASKIMVIMFGLHLVEGLGCFEVWVQSDAEVVVKKTK
        +D A  P     G G V+RNDKGE++ A A     +   + ++IM  +FG+      GC  + ++SD++ VV   K
Subjt:  MDVACSPNNKGNGYGVVLRNDKGEIVVAQAFCRGESFLVEASKIMVIMFGLHLVEGLGCFEVWVQSDAEVVVKKTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTTGCATGTAGTCCGAACAACAAGGGTAATGGGTATGGTGTTGTGCTTCGCAATGATAAGGGTGAAATTGTTGTGGCTCAAGCTTTTTGTAGAGGTGAA
AGCTTTCTGGTGGAAGCGAGCAAGATCATGGTAATAATGTTTGGTCTTCACTTGGTTGAAGGTCTTGGGTGTTTTGAGGTTTGGGTTCAATCAGATGCAGAGGTT
GTGGTGAAAAAAACTAAAAGTCCATTGATTTCACATTTTCTCATTTTGGGGTTCTCTATGCCAAAGTTGTTGACTTAA
mRNA sequenceShow/hide mRNA sequence
TGTTGGCTTAAGTGGGGTGATAGGACCTCAAAGTGATCCCCCAACAAAGCATCCACGCAACGACAGAAAAACACAATCTAGGGTATAAAAATGAGAAGGGTGACT
GGGTTGGAATGTTGACGGATTGCATTACATTAGTTAATTTTTCTTTGCTTGTTAACCGGGTGCCAACTAAAACCTTTTATCCAAAAAGGGGAATGAATTTTGGGG
ATCCTATATCCTTTATTCTATGTGCTGAAAGTTTCTTGGCTTTGCTTCTCAAAGGTAGCAGAACGTCAAAGCTTATAAGGTGTCAGATTGCCAGGAGTTCCCCAA
GCATATCTCATCTTTTCTTTGCATATGATAGTCTTTTGTTTTACAAGGCAAGTCCTAAGGCTTGTTGCTTAATTAAAAAGATTCTTAAAATTTATGAAGCTGGCT
TGGGCCAATGAGTAAAGTCTAACAAATTTTAAATGTTGTTTAGCCCAAATGTGAATAGAGATCGTGGGTTATATTAGGGAAACATTCTTGGAGTCAAGGTGTTTT
CGGATCTTGGTCAATATTTGGGCCTTATTGCTCAGGTTTGCAGAAAGAGGAGTCGATATTTTCATTTCATCGAGGAGTAAATTCAAAAATGTGTTGCCGTTTGGA
AAGGGAAACTTTTTTCAGTGGGAGGAAGGAGGTTTTGATAAAAGCATTGGCACAAGCCCTTCTCGCTTACACAATATCCTGCCTAAAATTGCCAAAGGGGGTTTA
CAATCAGCTTGTTCAATATGTGGCTCGGTCTTAGTAGGGATCATCTGGAAATCAATGTAAAATTCATTGGTTTAAATGGGATGCCCTTTTCAAACCCAAAATTAA
TGCAGGCCTCGAATTTTTGGATTTGGAGGGTTTTAATCAAGCCTTTTTAACAATGACAGCTTGAAGATTTTTGCAATAGCCCTGATCTATTGTTGCTCAAGTGTT
TAGAGGAAAATGTTTCCATAATGAGGGATTTTTGGAGGCTAAGGAGGGTTATCTTCCATCTCATGTATTGAGGAGTATTTTGTGGAGCACTTCTTGTGAAAGGAA
CCAAAACGCAAATTGGCACTAGAAAGGAAACCTCACTATTTTGCAATCCTTGGATTCTCAGAGAGCATAGTTTTAAACCTTTAACTCATATGCCTTTTGGTCATG
AACATTTAAAGGTTGCTCATGTCATTAATGATGAGGAGTGGAATCTGAATGAATTGAGGAAATGGCTCAATGAGGACAATATTATGACTGTGTTAGGCATTTTAC
AAAAAAAAAAATGGTATGTCCTCAACTTTTAGTGCATATAAATTATTTTCACAATCTAGGCTTGCCCCCTCTTCCTCTTACAGTGCCAGGGAAATATGATGGAAG
AAGACGGGGGTCTCTCATCTTCTTACAAAGTCAAAATTTCTTACGGAAAGTGTTTCATTTGACATTGGCTACAAGAGTTAATTTACTTAAAAGACAGATTGTGGA
GGAGGGTTGGTGTGTGTGCTGTGGGATGCAATATGAAATAAAGAAGCATATTTTTTTCAACAGTAGTAGAACAAAGAAAGTATGATGATGGTGTTTGACAAATAT
TTTGTGTGATAGTCAATATAAGGTGTCTATGAATGACTTTCTTGTGAATTTAGCTAAAGAAGCTTTCTACTACTGATTTTCTGTGTTTTGGCATAGTGTGCTGAT
TTATTTGGGAGGACCGAAACAAATAAAATTGAGGTTTTTTGGTAGCACCCGTTACGAAGAAGATTGAATGGAATGAAGATTAAATTCTAGAGGTGCAAGTTGCAG
TTGGTAGATGAGGTGGGCATTCTGATTTCAAGTCTAATGTGCAAGTTTGAATAAGCCTACATTTGGGTAGGGTGGCTGATAACTTTGTTTCTGGTTGGCGTCGAC
CATAGTATGGATGTTGCATGTAGTCCGAACAACAAGGGTAATGGGTATGGTGTTGTGCTTCGCAATGATAAGGGTGAAATTGTTGTGGCTCAAGCTTTTTGTAGA
GGTGAAAGCTTTCTGGTGGAAGCGAGCAAGATCATGGTAATAATGTTTGGTCTTCACTTGGTTGAAGGTCTTGGGTGTTTTGAGGTTTGGGTTCAATCAGATGCA
GAGGTTGTGGTGAAAAAAACTAAAAGTCCATTGATTTCACATTTTCTCATTTTGGGGTTCTCTATGCCAAAGTTGTTGACTTAATGTCCAGATTGAAGGTGAGAA
GGTTCAAGTATATTTCCAAGAAGGCTCCCTATTTCCATGAAGAGTAAGAGGGTTACTCATAATCTTACTTCTTTTGCTTTGTCTTATGATATGACTTGTTGGTTA
GATCACCTTCCATTTTGGATAGATGTGGTGATTAGGGTTGAAATGTAATTGTTTCTTTGTTTGAAGTGATAATCTGTTAAAAAAAATTAAATTTAGAATATCATT
GGATAAAATTCAAAATTATTTCTAACAAATCAATTAGTTTTAAAAATATTTTAAAAAAAAATTGTTAACGACGTGTATTAAGCATAGAATAGTTCAACTTGGGGG
TTTTTTTTTCTATATTACTTTGAGAAACATTTTTCCATTCTATATGCAACTAGGGATTTAAGGACACAAAAACTCCTACGTATGCAACTGGTATACACGAATTTA
ATCCTAATTTCTGCTTATGTTTACCTAACAACAAACAAAAAGTGAATGAGTTTTCTAAACCACTTTTTCTTTTCGAACCTCTGAACTACCTATGTTCATAATTTC
CCCCTTGTTTCGTTTCAGTGGCGAGGTGCAACAAACATTATTCTAAATCTAATATTCATATTCGTATTTCGTTTAGGCGTTGGTGGTGCGGTCATTGCGCATGTT
ATATCGCATAAAGCTTTATTTATATGTTGATTCAATTACACAACATATAGAGATTTTTCCTCCTATTATTCTTCCATTTACTTTTTATTTTGTAGATATCTAATT
GCACTTATTCTTTTTTGAGATCAATGGGACAAATTGATCAGAACCTCCTAGTATCAAACATTTGCAATTTAGTCGGCTTCAGAAAAATGTATGCTCAAATAACGT
ACTAAGCTTCTCACCTCTCAGTCATCATCGAAGGTTCATCAGTGAGTAGTAACTCAACATGATCCCAAGGAAATAGGGTGATTGGTGGCTACAAAAGATTCGTGA
TGGGTCATCACAATGATCACAATACCAATATACCAATAGACAACCTGTTGGATTTGATATACACTATTAAGATGTTTTGCTTGTGGTCACATTTTGTTTATCTAA
TGAAATTGTATTAACTTCATTTTGTCCATATGTTCATTTGT
Protein sequenceShow/hide protein sequence
MDVACSPNNKGNGYGVVLRNDKGEIVVAQAFCRGESFLVEASKIMVIMFGLHLVEGLGCFEVWVQSDAEVVVKKTKSPLISHFLILGFSMPKLLT