| GenBank top hits | e value | %identity | Alignment |
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| KAA0036644.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 7.7e-67 | 94.81 | Show/hide |
Query: MKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNS
MKDLGEA VILGVKIRKNKT LSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGD+VSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHN
Subjt: MKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNS
Query: DRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
+RYHWDALRHLLRYLKGTIDYCLHF KFPAVL GY
Subjt: DRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
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| KAA0049695.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.0e-74 | 93.38 | Show/hide |
Query: MELVTDTKFFLSSHFEMKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVSQPEYAKIIGSVMYLMNYTRP
MEL+TDTKFFLSSHFEMKDLGEA VILGVKIRKNKT LSLCQSHYVEKILKKFD FDVSPVRTPFDASKHL KNKGD+VSQPEYAKIIGSVMYLMNYTRP
Subjt: MELVTDTKFFLSSHFEMKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVSQPEYAKIIGSVMYLMNYTRP
Query: DIAYAVSRLSRYTHNSDRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
DIAYAVSRLSRYTHN DRYHWD LRHLLRYLKGTIDYCL+FNKFPAVL GY
Subjt: DIAYAVSRLSRYTHNSDRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
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| KAA0049794.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.8e-66 | 92.59 | Show/hide |
Query: MKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNS
MKDLGEA ILGVKIRKNKT LSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGD+VSQPEYAKIIG+VMYLMNYTRPDIAYA+SRLSRYTHN
Subjt: MKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNS
Query: DRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
+RYHWDALRHLLRYLKGTIDYCLHFNKFP VL GY
Subjt: DRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
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| TYK06518.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 4.2e-89 | 94.8 | Show/hide |
Query: MVGADCILICLYVDDMLIFGTNMELVTDTKFFLSSHFEMKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDN
MVGADCILICLYVDDMLIFGTNMEL+TDTK+FLSSHFEMKDLGEA VILGVKIRKNKT LSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGD+
Subjt: MVGADCILICLYVDDMLIFGTNMELVTDTKFFLSSHFEMKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDN
Query: VSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNSDRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
VSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHN +RYHWDALRHLLRYLKGTIDYCLHF KFPAVL GY
Subjt: VSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNSDRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
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| TYK22837.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 5.0e-66 | 93.33 | Show/hide |
Query: MKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNS
MKDLGEA VILGVKIRKNKT LSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGD+VSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHN
Subjt: MKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNS
Query: DRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
+RYHWDALR LLRYLKGTIDYCLHFNKFP +L GY
Subjt: DRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SZD1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.7e-67 | 94.81 | Show/hide |
Query: MKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNS
MKDLGEA VILGVKIRKNKT LSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGD+VSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHN
Subjt: MKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNS
Query: DRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
+RYHWDALRHLLRYLKGTIDYCLHF KFPAVL GY
Subjt: DRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
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| A0A5A7U3G0 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.9e-66 | 92.59 | Show/hide |
Query: MKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNS
MKDLGEA ILGVKIRKNKT LSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGD+VSQPEYAKIIG+VMYLMNYTRPDIAYA+SRLSRYTHN
Subjt: MKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNS
Query: DRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
+RYHWDALRHLLRYLKGTIDYCLHFNKFP VL GY
Subjt: DRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
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| A0A5A7U7W6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.9e-75 | 93.38 | Show/hide |
Query: MELVTDTKFFLSSHFEMKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVSQPEYAKIIGSVMYLMNYTRP
MEL+TDTKFFLSSHFEMKDLGEA VILGVKIRKNKT LSLCQSHYVEKILKKFD FDVSPVRTPFDASKHL KNKGD+VSQPEYAKIIGSVMYLMNYTRP
Subjt: MELVTDTKFFLSSHFEMKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVSQPEYAKIIGSVMYLMNYTRP
Query: DIAYAVSRLSRYTHNSDRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
DIAYAVSRLSRYTHN DRYHWD LRHLLRYLKGTIDYCL+FNKFPAVL GY
Subjt: DIAYAVSRLSRYTHNSDRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
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| A0A5D3C5T2 Ty1-copia retrotransposon protein | 2.0e-89 | 94.8 | Show/hide |
Query: MVGADCILICLYVDDMLIFGTNMELVTDTKFFLSSHFEMKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDN
MVGADCILICLYVDDMLIFGTNMEL+TDTK+FLSSHFEMKDLGEA VILGVKIRKNKT LSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGD+
Subjt: MVGADCILICLYVDDMLIFGTNMELVTDTKFFLSSHFEMKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDN
Query: VSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNSDRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
VSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHN +RYHWDALRHLLRYLKGTIDYCLHF KFPAVL GY
Subjt: VSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNSDRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
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| A0A5D3DGL6 Ty1-copia retrotransposon protein | 2.4e-66 | 93.33 | Show/hide |
Query: MKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNS
MKDLGEA VILGVKIRKNKT LSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGD+VSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHN
Subjt: MKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNS
Query: DRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
+RYHWDALR LLRYLKGTIDYCLHFNKFP +L GY
Subjt: DRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.3e-21 | 37.74 | Show/hide |
Query: ILICLYVDDMLIFGTNMELVTDTKFFLSSHFEMKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVSQPEY
I + LYVDD++I +M + + K +L F M DL E +G++I + + L QS YV+KIL KF+ + + V TP + + + D
Subjt: ILICLYVDDMLIFGTNMELVTDTKFFLSSHFEMKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVSQPEY
Query: AKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNSDRYHWDALRHLLRYLKGTIDYCLHFNK
+IG +MY+M TRPD+ AV+ LSRY+ ++ W L+ +LRYLKGTID L F K
Subjt: AKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNSDRYHWDALRHLLRYLKGTIDYCLHFNK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-29 | 42.13 | Show/hide |
Query: ILICLYVDDMLIFGTNMELVTDTKFFLSSHFEMKDLGEAYVILGVKIRKNKTI--LSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNK-------
I++ LYVDDMLI G + L+ K LS F+MKDLG A ILG+KI + +T L L Q Y+E++L++F+ + PV TP + HLK +K
Subjt: ILICLYVDDMLIFGTNMELVTDTKFFLSSHFEMKDLGEAYVILGVKIRKNKTI--LSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNK-------
Query: --GDNVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNSDRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
N+++ Y+ +GS+MY M TRPDIA+AV +SR+ N + HW+A++ +LRYL+GT CL F +L GY
Subjt: --GDNVSQPEYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNSDRYHWDALRHLLRYLKGTIDYCLHFNKFPAVLGGY
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| P92519 Uncharacterized mitochondrial protein AtMg00810 | 3.3e-20 | 35.67 | Show/hide |
Query: ICLYVDDMLIFGTNMELVTDTKFFLSSHFEMKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVSQPEYAK
+ LYVDD+L+ G++ L+ F LSS F MKDLG + LG++I+ + + L L Q+ Y E+IL D P+ TP + + ++
Subjt: ICLYVDDMLIFGTNMELVTDTKFFLSSHFEMKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVSQPEYAK
Query: IIGSVMYLMNYTRPDIAYAVSRLSRYTHNSDRYHWDALRHLLRYLKGTIDYCLHFNK
I+G++ YL TRPDI+YAV+ + + H +D L+ +LRY+KGTI + L+ +K
Subjt: IIGSVMYLMNYTRPDIAYAVSRLSRYTHNSDRYHWDALRHLLRYLKGTIDYCLHFNK
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.5e-22 | 37.2 | Show/hide |
Query: GADCILICLYVDDMLIFGTNMELVTDTKFFLSSHFEMKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVS
G + + +YVDD+LI G + L+ +T LS F +KD E + LG++ ++ T L L Q Y+ +L + + PV TP S L G ++
Subjt: GADCILICLYVDDMLIFGTNMELVTDTKFFLSSHFEMKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVS
Query: QP-EYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNSDRYHWDALRHLLRYLKGTIDYCLHFNK
P EY I+GS+ YL +TRPDI+YAV+RLS++ H H AL+ +LRYL GT ++ + K
Subjt: QP-EYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNSDRYHWDALRHLLRYLKGTIDYCLHFNK
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.6e-22 | 37.2 | Show/hide |
Query: GADCILICLYVDDMLIFGTNMELVTDTKFFLSSHFEMKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVS
G I + +YVDD+LI G + L+ T LS F +K+ + + LG++ ++ L L Q Y +L + + PV TP S L + G +
Subjt: GADCILICLYVDDMLIFGTNMELVTDTKFFLSSHFEMKDLGEAYVILGVKIRKNKTILSLCQSHYVEKILKKFDSFDVSPVRTPFDASKHLKKNKGDNVS
Query: QP-EYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNSDRYHWDALRHLLRYLKGTIDYCLHFNK
P EY I+GS+ YL +TRPD++YAV+RLS+Y H HW+AL+ +LRYL GT D+ + K
Subjt: QP-EYAKIIGSVMYLMNYTRPDIAYAVSRLSRYTHNSDRYHWDALRHLLRYLKGTIDYCLHFNK
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