; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc05g0129351 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0129351
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag/pol protein
Genome locationCMiso1.1chr05:7285732..7286550
RNA-Seq ExpressionCmc05g0129351
SyntenyCmc05g0129351
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032016.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa]6.7e-14297.3Show/hide
Query:  YKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFRRTKDYMLVYSSKD
        YKMQNSKKALLPYRYGIHLSKEQCPKTPQEV+DMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFRRTKDYMLV  SKD
Subjt:  YKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFRRTKDYMLVYSSKD

Query:  LILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCDNSGAVTNSREPRS
        LILTGYTDF FQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCDNSGAVTNSREPRS
Subjt:  LILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCDNSGAVTNSREPRS

Query:  HKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRGL
        HKH KHIE+KYHLMREIIHRGDVTVTKISSEQNMADPFTK LTTKVFERHLHGLGLRGL
Subjt:  HKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRGL

KAA0033024.1 gag/pol protein [Cucumis melo var. makuwa]2.8e-13287.13Show/hide
Query:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR
        MSQTSYIDKMLSRYKMQNSKK LL YRYGIHLSKEQCPKTPQEVEDMSNIPYAS   SLMYAMLCTRSDICYSV IVSRYQSNP RDHWT VKNILKY R
Subjt:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR

Query:  RTKDYMLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCD
        RTKDYMLVY S+DLILTGYT+ DFQTDKDARKSTS SVFTLN GAV WRSIKQSCI DS +EA+Y+ ACEAAKE +WLKKFLTDLEVVPNM LPITLYCD
Subjt:  RTKDYMLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCD

Query:  NSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRGL
        NSGAV NSREPRSHK GKHIEQK+HL+REI+HRGDVT+TKIS EQNMADPFTKALTTKVFE HLHGLGL  L
Subjt:  NSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRGL

KAA0058854.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-13587.87Show/hide
Query:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR
        MSQTSYIDKMLSRYKMQNSKK LLPYRYGIHLSKEQCPKTPQEVEDMSNIPYA A+GSLMYAMLC R DICYSV IVS YQSNP RDHWT VKNI+KY R
Subjt:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR

Query:  RTKDYMLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCD
        RTKDYM VY SKDLILT YTD DFQTDKDARKSTSGSVF LNGGAVVWRSIKQSCI DSTME +Y+AACEAAKE +WLKKFLTDLEVVPNM LPITLYCD
Subjt:  RTKDYMLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCD

Query:  NSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRGL
        NSGAV NSREPRSHKHGKHIE+KYHL+R+I+HRGDVTVTKISSE+NMADPF KALT K+FE HLHGLGLRGL
Subjt:  NSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRGL

KAA0067716.1 gag/pol protein [Cucumis melo var. makuwa]7.5e-13386.72Show/hide
Query:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR
        MSQTSYIDKMLSR+KMQNSKK LLPYRYGIHLSKEQCPKT Q+V+DMSNIPYASA+GSLMYAMLCTR +ICYSVGIVSRYQSNP RDHWTAVKNILKY R
Subjt:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR

Query:  RTKDYMLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCD
        RTK+YMLVY SKDLILTGY D+DFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCI DSTME EY+AA EA KE +WLKKFLTDLEVVPNMH+PITLYCD
Subjt:  RTKDYMLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCD

Query:  NSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRG
        NSG V NSREPRSHK GKHIE+KYHL+REI+HRGDVTVTK+ SEQNMA PFTKALT KVF  HL GL LRG
Subjt:  NSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRG

TYK23767.1 gag/pol protein [Cucumis melo var. makuwa]1.2e-13587.87Show/hide
Query:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR
        MSQTSYIDKMLSRYKMQNSKK LLPYRYGIHLSKEQCPKTPQEVEDMSNIPYA A+GSLMYAMLC R DICYSV IVS YQSNP RDHWT VKNI+KY R
Subjt:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR

Query:  RTKDYMLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCD
        RTKDYM VY SKDLILT YTD DFQTDKDARKSTSGSVF LNGGAVVWRSIKQSCI DSTME +Y+AACEAAKE +WLKKFLTDLEVVPNM LPITLYCD
Subjt:  RTKDYMLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCD

Query:  NSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRGL
        NSGAV NSREPRSHKHGKHIE+KYHL+R+I+HRGDVTVTKISSE+NMADPF KALT K+FE HLHGLGLRGL
Subjt:  NSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRGL

TrEMBL top hitse value%identityAlignment
A0A5A7SP86 Gag/pol protein1.4e-13287.13Show/hide
Query:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR
        MSQTSYIDKMLSRYKMQNSKK LL YRYGIHLSKEQCPKTPQEVEDMSNIPYAS   SLMYAMLCTRSDICYSV IVSRYQSNP RDHWT VKNILKY R
Subjt:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR

Query:  RTKDYMLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCD
        RTKDYMLVY S+DLILTGYT+ DFQTDKDARKSTS SVFTLN GAV WRSIKQSCI DS +EA+Y+ ACEAAKE +WLKKFLTDLEVVPNM LPITLYCD
Subjt:  RTKDYMLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCD

Query:  NSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRGL
        NSGAV NSREPRSHK GKHIEQK+HL+REI+HRGDVT+TKIS EQNMADPFTKALTTKVFE HLHGLGL  L
Subjt:  NSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRGL

A0A5A7UUR4 Gag/pol protein6.0e-13687.87Show/hide
Query:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR
        MSQTSYIDKMLSRYKMQNSKK LLPYRYGIHLSKEQCPKTPQEVEDMSNIPYA A+GSLMYAMLC R DICYSV IVS YQSNP RDHWT VKNI+KY R
Subjt:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR

Query:  RTKDYMLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCD
        RTKDYM VY SKDLILT YTD DFQTDKDARKSTSGSVF LNGGAVVWRSIKQSCI DSTME +Y+AACEAAKE +WLKKFLTDLEVVPNM LPITLYCD
Subjt:  RTKDYMLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCD

Query:  NSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRGL
        NSGAV NSREPRSHKHGKHIE+KYHL+R+I+HRGDVTVTKISSE+NMADPF KALT K+FE HLHGLGLRGL
Subjt:  NSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRGL

A0A5A7VMF5 Gag/pol protein3.6e-13386.72Show/hide
Query:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR
        MSQTSYIDKMLSR+KMQNSKK LLPYRYGIHLSKEQCPKT Q+V+DMSNIPYASA+GSLMYAMLCTR +ICYSVGIVSRYQSNP RDHWTAVKNILKY R
Subjt:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR

Query:  RTKDYMLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCD
        RTK+YMLVY SKDLILTGY D+DFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCI DSTME EY+AA EA KE +WLKKFLTDLEVVPNMH+PITLYCD
Subjt:  RTKDYMLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCD

Query:  NSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRG
        NSG V NSREPRSHK GKHIE+KYHL+REI+HRGDVTVTK+ SEQNMA PFTKALT KVF  HL GL LRG
Subjt:  NSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRG

A0A5D3CYG9 Retrovirus-related pol polyprotein from transposon tnt 1-943.3e-14297.3Show/hide
Query:  YKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFRRTKDYMLVYSSKD
        YKMQNSKKALLPYRYGIHLSKEQCPKTPQEV+DMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFRRTKDYMLV  SKD
Subjt:  YKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFRRTKDYMLVYSSKD

Query:  LILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCDNSGAVTNSREPRS
        LILTGYTDF FQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCDNSGAVTNSREPRS
Subjt:  LILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCDNSGAVTNSREPRS

Query:  HKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRGL
        HKH KHIE+KYHLMREIIHRGDVTVTKISSEQNMADPFTK LTTKVFERHLHGLGLRGL
Subjt:  HKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRGL

A0A5D3DJL5 Gag/pol protein6.0e-13687.87Show/hide
Query:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR
        MSQTSYIDKMLSRYKMQNSKK LLPYRYGIHLSKEQCPKTPQEVEDMSNIPYA A+GSLMYAMLC R DICYSV IVS YQSNP RDHWT VKNI+KY R
Subjt:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR

Query:  RTKDYMLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCD
        RTKDYM VY SKDLILT YTD DFQTDKDARKSTSGSVF LNGGAVVWRSIKQSCI DSTME +Y+AACEAAKE +WLKKFLTDLEVVPNM LPITLYCD
Subjt:  RTKDYMLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCD

Query:  NSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRGL
        NSGAV NSREPRSHKHGKHIE+KYHL+R+I+HRGDVTVTKISSE+NMADPF KALT K+FE HLHGLGLRGL
Subjt:  NSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRGL

SwissProt top hitse value%identityAlignment
P04146 Copia protein5.5e-3833.94Show/hide
Query:  MSQTSYIDKMLSRYKMQNSKKALLP----YRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNIL
        +SQ++Y+ K+LS++ M+N      P      Y +  S E C           N P  S +G LMY MLCTR D+  +V I+SRY S    + W  +K +L
Subjt:  MSQTSYIDKMLSRYKMQNSKKALLP----YRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNIL

Query:  KYFRRTKDYMLVYSSK---DLILTGYTDFDFQTDKDARKSTSGSVFTL-NGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMH
        +Y + T D  L++      +  + GY D D+   +  RKST+G +F + +   + W + +Q+ +  S+ EAEY+A  EA +E +WLK  LT + +   + 
Subjt:  KYFRRTKDYMLVYSSK---DLILTGYTDFDFQTDKDARKSTSGSVFTL-NGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMH

Query:  LPITLYCDNSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGL
         PI +Y DN G ++ +  P  HK  KHI+ KYH  RE +    + +  I +E  +AD FTK L    F      LGL
Subjt:  LPITLYCDNSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGL

P0CV72 Secreted RxLR effector protein 1613.4e-2745.11Show/hide
Query:  MSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFRRTKDYMLVYSSKDLI-LTGYTDFDFQTDKDARKSTSGSVFTLNGGA
        M N+PY SAVG++MY M+ TR D+  +VG++S++ S+P   HW A+K +L+Y + T+ Y L ++      L GY+D D+  D ++R+STSG +F LNGG 
Subjt:  MSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFRRTKDYMLVYSSKDLI-LTGYTDFDFQTDKDARKSTSGSVFTLNGGA

Query:  VVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWL
        V WRS KQ  +  S+ E EY+A  EA +E +WL
Subjt:  VVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.8e-6045.59Show/hide
Query:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR
        +SQ  YI+++L R+ M+N+K    P    + LSK+ CP T +E  +M+ +PY+SAVGSLMYAM+CTR DI ++VG+VSR+  NP ++HW AVK IL+Y R
Subjt:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR

Query:  RTKDYMLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCD
         T    L +   D IL GYTD D   D D RKS++G +FT +GGA+ W+S  Q C+  ST EAEYIAA E  KE IWLK+FL +L +    ++   +YCD
Subjt:  RTKDYMLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCD

Query:  NSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFE
        +  A+  S+    H   KHI+ +YH +RE++    + V KIS+ +N AD  TK +    FE
Subjt:  NSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFE

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.3e-2831.85Show/hide
Query:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR
        +SQ  YI  +L+R  M  +K    P      LS     K     E      Y   VGSL Y +  TR DI Y+V  +S++   P  +H  A+K IL+Y  
Subjt:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR

Query:  RTKDY-MLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYC
         T ++ + +     L L  Y+D D+  DKD   ST+G +  L    + W S KQ  +V S+ EAEY +    + E  W+   LT+L +   +  P  +YC
Subjt:  RTKDY-MLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYC

Query:  DNSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGL
        DN GA      P  H   KHI   YH +R  +  G + V  +S+   +AD  TK L+   F+     +G+
Subjt:  DNSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGL

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.5e-3031.85Show/hide
Query:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR
        +SQ  Y   +L+R  M  +K    P      L+     K P   E      Y   VGSL Y +  TR D+ Y+V  +S+Y   P  DHW A+K +L+Y  
Subjt:  MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFR

Query:  RTKDY-MLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYC
         T D+ + +     L L  Y+D D+  D D   ST+G +  L    + W S KQ  +V S+ EAEY +    + E  W+   LT+L +   +  P  +YC
Subjt:  RTKDY-MLVYSSKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYC

Query:  DNSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGL
        DN GA      P  H   KHI   YH +R  +  G + V  +S+   +AD  TK L+   F+     +G+
Subjt:  DNSGAVTNSREPRSHKHGKHIEQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGL

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 86.7e-2335.75Show/hide
Query:  YASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFRRTKDYMLVYSSK-DLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRS
        Y   +G LMY  + TR DI ++V  +S++   P   H  AV  IL Y + T    L YSS+ ++ L  ++D  FQ+ KD R+ST+G    L    + W+S
Subjt:  YASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFRRTKDYMLVYSSK-DLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRS

Query:  IKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCDNSGAVTNSREPRSHKHGKHIEQKYHLMRE
         KQ  +  S+ EAEY A   A  E +WL +F  +L++   +  P  L+CDN+ A+  +     H+  KHIE   H +RE
Subjt:  IKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCDNSGAVTNSREPRSHKHGKHIEQKYHLMRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAAACATCTTATATAGACAAAATGTTGTCTAGATATAAGATGCAGAATTCCAAAAAGGCTCTGCTGCCGTATAGATATGGAATTCATTTATCAAAAGAACAATG
TCCAAAGACACCTCAAGAAGTTGAGGATATGAGTAACATTCCCTATGCCTCTGCTGTTGGGAGTCTGATGTATGCAATGTTATGTACTAGATCTGACATTTGTTACTCAG
TGGGGATTGTTAGTAGATATCAGTCCAATCCTGAACGTGATCATTGGACAGCCGTTAAGAATATTCTAAAATATTTTAGAAGAACAAAAGACTACATGCTTGTGTATAGT
TCTAAGGATCTGATCCTTACTGGATACACTGACTTCGATTTTCAAACTGATAAAGATGCTAGAAAGTCTACATCAGGATCAGTTTTCACTCTGAACGGAGGAGCAGTAGT
ATGGAGAAGCATAAAACAATCTTGTATTGTTGACTCCACTATGGAAGCTGAATATATAGCTGCCTGTGAAGCAGCAAAGGAAGAAATATGGCTTAAAAAGTTCTTAACAG
ATTTGGAAGTTGTCCCAAATATGCATCTGCCAATCACCTTGTATTGTGACAACAGTGGTGCAGTTACAAATTCACGAGAACCTAGAAGTCATAAACATGGAAAGCACATT
GAACAAAAGTACCATCTTATGAGGGAAATCATACATCGAGGAGACGTTACAGTAACAAAAATCTCCTCCGAGCAAAACATGGCTGATCCGTTTACAAAAGCTCTCACGAC
TAAAGTGTTTGAGAGGCACCTACATGGTTTAGGTCTACGTGGTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAAACATCTTATATAGACAAAATGTTGTCTAGATATAAGATGCAGAATTCCAAAAAGGCTCTGCTGCCGTATAGATATGGAATTCATTTATCAAAAGAACAATG
TCCAAAGACACCTCAAGAAGTTGAGGATATGAGTAACATTCCCTATGCCTCTGCTGTTGGGAGTCTGATGTATGCAATGTTATGTACTAGATCTGACATTTGTTACTCAG
TGGGGATTGTTAGTAGATATCAGTCCAATCCTGAACGTGATCATTGGACAGCCGTTAAGAATATTCTAAAATATTTTAGAAGAACAAAAGACTACATGCTTGTGTATAGT
TCTAAGGATCTGATCCTTACTGGATACACTGACTTCGATTTTCAAACTGATAAAGATGCTAGAAAGTCTACATCAGGATCAGTTTTCACTCTGAACGGAGGAGCAGTAGT
ATGGAGAAGCATAAAACAATCTTGTATTGTTGACTCCACTATGGAAGCTGAATATATAGCTGCCTGTGAAGCAGCAAAGGAAGAAATATGGCTTAAAAAGTTCTTAACAG
ATTTGGAAGTTGTCCCAAATATGCATCTGCCAATCACCTTGTATTGTGACAACAGTGGTGCAGTTACAAATTCACGAGAACCTAGAAGTCATAAACATGGAAAGCACATT
GAACAAAAGTACCATCTTATGAGGGAAATCATACATCGAGGAGACGTTACAGTAACAAAAATCTCCTCCGAGCAAAACATGGCTGATCCGTTTACAAAAGCTCTCACGAC
TAAAGTGTTTGAGAGGCACCTACATGGTTTAGGTCTACGTGGTTTGTAA
Protein sequenceShow/hide protein sequence
MSQTSYIDKMLSRYKMQNSKKALLPYRYGIHLSKEQCPKTPQEVEDMSNIPYASAVGSLMYAMLCTRSDICYSVGIVSRYQSNPERDHWTAVKNILKYFRRTKDYMLVYS
SKDLILTGYTDFDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEAEYIAACEAAKEEIWLKKFLTDLEVVPNMHLPITLYCDNSGAVTNSREPRSHKHGKHI
EQKYHLMREIIHRGDVTVTKISSEQNMADPFTKALTTKVFERHLHGLGLRGL