| GenBank top hits | e value | %identity | Alignment |
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| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 8.5e-92 | 80.66 | Show/hide |
Query: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKVYSNAFLWHLSLGHINLN
++LK+VLY P MKRNLISI+C+LEH+Y ISFE+NE FIL KGI ICSAI ENNLYKLRPTRAN VLNTE+FRT ETQNK+QKV SNA+LWHL LGHINLN
Subjt: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKVYSNAFLWHLSLGHINLN
Query: RIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECETE
RIERLVKS +LNQLEDNSLPPC+SCLEGK K SFTGKGLRAK+ LELVHSD CGPMNVKA+GGYEYFISFIDD+SRYGHVYL+ +KS+SFEKFKE + E
Subjt: RIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECETE
Query: VENESSKTIKTL
VENE KTIKTL
Subjt: VENESSKTIKTL
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| AMY96445.1 gag/pol protein [Momordica dioica] | 9.8e-72 | 66.98 | Show/hide |
Query: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKVYSNAFLWHLSLGHINLN
M L N P MKRNLISI+C+LEH+Y ISFE+NE FIL KGI IC A + YKLRPTRAN VLNT ETQNK+Q S +LWHL LGHINLN
Subjt: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKVYSNAFLWHLSLGHINLN
Query: RIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECETE
RIE+L K LL QLED SLPPC+SCLEGK K FTGKGLRA LLEL+H+D CGPM+VKA+GGY+YF+SF DD SRYG+VYL+++KS+SFEKFKE + E
Subjt: RIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECETE
Query: VENESSKTIKTL
VENE K IKTL
Subjt: VENESSKTIKTL
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 3.2e-75 | 66.82 | Show/hide |
Query: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKV--YSNAFLWHLSLGHIN
M L+N+ P++KRNL+S+SCL+EHMY I+F +NE+FI + G+HICSA LENNLY LRP A VLN E+FRTA TQNKRQ++ +N +LWHL LGHIN
Subjt: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKV--YSNAFLWHLSLGHIN
Query: LNRIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECE
L+RI RLVK+ LLN+L+D SLPPC+SCLEGK K FTGKG RAK LEL+HSD CGPMNVKA+GG+EYFISFIDDYSRYG++YL+++KS++ EKFKE +
Subjt: LNRIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECE
Query: TEVENESSKTIKTL
TEVEN SK IK L
Subjt: TEVENESSKTIKTL
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 4.7e-74 | 66.51 | Show/hide |
Query: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKV--YSNAFLWHLSLGHIN
M L+N+ P++KRNL+S+SCL+EHMY I+F +NE+FI + G+HICSA LENNLY LRP A VLN E+FRTA TQNKRQ++ +N +LWHL LGHIN
Subjt: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKV--YSNAFLWHLSLGHIN
Query: LNRIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECE
L+RI RLVK LLN+L+D SLPPC+SCLEGK K FTGKG RAK LEL+HSD CGPMNVKA+G +EYFISFIDDYSRYG++YL+++KS++ EKFKE +
Subjt: LNRIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECE
Query: TEVENESSKTIK
TEVEN SK IK
Subjt: TEVENESSKTIK
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| KAA0060534.1 gag/pol protein [Cucumis melo var. makuwa] | 6.1e-74 | 66.36 | Show/hide |
Query: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKVYS--NAFLWHLSLGHIN
M L+N+ P++KRNL+S+SCL+EHMY ISF +NE+FI + G+HICS LE+NLY L+P VLN E+FRTA TQNKRQ++ S N +LWHL LGHIN
Subjt: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKVYS--NAFLWHLSLGHIN
Query: LNRIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECE
L+RI RLVK+ LLN+LED+SLPPC+SCLEGK K FTGKG RAK LEL+HSD CGPMNVKA GG+EYFISFIDDYS YG++YLI++KS++ EKFKE +
Subjt: LNRIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECE
Query: TEVENESSKTIKTL
TEVEN SK IK L
Subjt: TEVENESSKTIKTL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A165U314 Gag/pol protein | 4.7e-72 | 66.98 | Show/hide |
Query: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKVYSNAFLWHLSLGHINLN
M L N P MKRNLISI+C+LEH+Y ISFE+NE FIL KGI IC A + YKLRPTRAN VLNT ETQNK+Q S +LWHL LGHINLN
Subjt: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKVYSNAFLWHLSLGHINLN
Query: RIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECETE
RIE+L K LL QLED SLPPC+SCLEGK K FTGKGLRA LLEL+H+D CGPM+VKA+GGY+YF+SF DD SRYG+VYL+++KS+SFEKFKE + E
Subjt: RIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECETE
Query: VENESSKTIKTL
VENE K IKTL
Subjt: VENESSKTIKTL
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| A0A5A7T2V9 Gag/pol protein | 2.3e-74 | 66.51 | Show/hide |
Query: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKV--YSNAFLWHLSLGHIN
M L+N+ P++KRNL+S+SCL+EHMY I+F +NE+FI + G+HICSA LENNLY LRP A VLN E+FRTA TQNKRQ++ +N +LWHL LGHIN
Subjt: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKV--YSNAFLWHLSLGHIN
Query: LNRIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECE
L+RI RLVK LLN+L+D SLPPC+SCLEGK K FTGKG RAK LEL+HSD CGPMNVKA+G +EYFISFIDDYSRYG++YL+++KS++ EKFKE +
Subjt: LNRIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECE
Query: TEVENESSKTIK
TEVEN SK IK
Subjt: TEVENESSKTIK
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| A0A5A7TZD0 Gag/pol protein | 1.6e-75 | 66.82 | Show/hide |
Query: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKV--YSNAFLWHLSLGHIN
M L+N+ P++KRNL+S+SCL+EHMY I+F +NE+FI + G+HICSA LENNLY LRP A VLN E+FRTA TQNKRQ++ +N +LWHL LGHIN
Subjt: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKV--YSNAFLWHLSLGHIN
Query: LNRIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECE
L+RI RLVK+ LLN+L+D SLPPC+SCLEGK K FTGKG RAK LEL+HSD CGPMNVKA+GG+EYFISFIDDYSRYG++YL+++KS++ EKFKE +
Subjt: LNRIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECE
Query: TEVENESSKTIKTL
TEVEN SK IK L
Subjt: TEVENESSKTIKTL
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| A0A5D3BNE1 Gag/pol protein | 3.0e-74 | 66.36 | Show/hide |
Query: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKVYS--NAFLWHLSLGHIN
M L+N+ P++KRNL+S+SCL+EHMY ISF +NE+FI + G+HICS LE+NLY L+P VLN E+FRTA TQNKRQ++ S N +LWHL LGHIN
Subjt: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKVYS--NAFLWHLSLGHIN
Query: LNRIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECE
L+RI RLVK+ LLN+LED+SLPPC+SCLEGK K FTGKG RAK LEL+HSD CGPMNVKA GG+EYFISFIDDYS YG++YLI++KS++ EKFKE +
Subjt: LNRIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECE
Query: TEVENESSKTIKTL
TEVEN SK IK L
Subjt: TEVENESSKTIKTL
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| E2GK51 Gag/pol protein (Fragment) | 4.1e-92 | 80.66 | Show/hide |
Query: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKVYSNAFLWHLSLGHINLN
++LK+VLY P MKRNLISI+C+LEH+Y ISFE+NE FIL KGI ICSAI ENNLYKLRPTRAN VLNTE+FRT ETQNK+QKV SNA+LWHL LGHINLN
Subjt: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKVYSNAFLWHLSLGHINLN
Query: RIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECETE
RIERLVKS +LNQLEDNSLPPC+SCLEGK K SFTGKGLRAK+ LELVHSD CGPMNVKA+GGYEYFISFIDD+SRYGHVYL+ +KS+SFEKFKE + E
Subjt: RIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECETE
Query: VENESSKTIKTL
VENE KTIKTL
Subjt: VENESSKTIKTL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.0e-11 | 28.43 | Show/hide |
Query: LKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKVYSNAFLWHLSLGHIN----
L++VL+ + NL+S+ L E I F+ + I + G+ + + + +LN + + K +N LWH GHI+
Subjt: LKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKVYSNAFLWHLSLGHIN----
Query: --LNRIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLE----LVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFE
+ R LLN LE S C+ CL GK ++ F K L+ K ++ +VHSD CGP+ YF+ F+D ++ Y YLI+ KSD F
Subjt: --LNRIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLE----LVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFE
Query: KFKE
F++
Subjt: KFKE
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.3e-23 | 31.92 | Show/hide |
Query: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKG-IHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKVYSNAFLWHLSLGHINL
++LK+V + P ++ NLIS L Y S+ N+ + L KG + I + LY+ N E+ + E + ++ + LWH +GH++
Subjt: MLLKNVLYAPQMKRNLISISCLLEHMYRISFEINESFILRKG-IHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKVYSNAFLWHLSLGHINL
Query: NRIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECET
++ L K L++ + ++ PCD CL GK +++SF R +L+LV+SD CGPM +++ GG +YF++FIDD SR VY+++ K F+ F++
Subjt: NRIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFKECET
Query: EVENESSKTIKTL
VE E+ + +K L
Subjt: EVENESSKTIKTL
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| P93293 Uncharacterized mitochondrial protein AtMg00300 | 7.4e-06 | 36.62 | Show/hide |
Query: LWHLSLGHINLNRIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNV
LWH L H++ +E LVK L+ + +SL C+ C+ GKT++++F+ K L+ VHSD G +V
Subjt: LWHLSLGHINLNRIERLVKSRLLNQLEDNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNV
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 9.7e-06 | 24.37 | Show/hide |
Query: LYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFR-TAETQNKRQKVYSNAF-LWHLSLGHINLNRIER
L+ P + +L+S+S L F N + G + + + Y L +++ + + + T NK + V + L H LGH N I++
Subjt: LYAPQMKRNLISISCLLEHMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFR-TAETQNKRQKVYSNAF-LWHLSLGHINLNRIER
Query: LVKSRLLNQLEDNSLP-------PCDSCLEGKTNKISFTGKGLRAKIL-----LELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSD
+K + L+++ + C CL GK+ K KG R K + +H+D GP++ K YFISF D+ +R+ VY + ++ +
Subjt: LVKSRLLNQLEDNSLP-------PCDSCLEGKTNKISFTGKGLRAKIL-----LELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSD
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.5e-09 | 24.07 | Show/hide |
Query: LKNVLYAPQMKRNLISISCLLE------HMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKVYSNAFLWHLSLGH
L N+LY P + +NLIS+ L + SF++ + L G+ + ++ LY+ + V LF + ++ WH LGH
Subjt: LKNVLYAPQMKRNLISISCLLE------HMYRISFEINESFILRKGIHICSAILENNLYKLRPTRANFVLNTELFRTAETQNKRQKVYSNAFLWHLSLGH
Query: INLNRIERLVKSRLLNQLE-DNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFK
+ + ++ + L+ L + C CL K+NK+ F+ + + LE ++SD + + Y Y++ F+D ++RY +Y ++ KS E F
Subjt: INLNRIERLVKSRLLNQLE-DNSLPPCDSCLEGKTNKISFTGKGLRAKILLELVHSDHCGPMNVKAKGGYEYFISFIDDYSRYGHVYLIQNKSDSFEKFK
Query: ECETEVENESSKTIKT
+ +EN I T
Subjt: ECETEVENESSKTIKT
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