| GenBank top hits | e value | %identity | Alignment |
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| KAA0032043.1 gag/pol protein [Cucumis melo var. makuwa] | 3.2e-89 | 98.84 | Show/hide |
Query: MLAENTTAIKNILKYLTRYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLEVVPNMHLSITLYCD
MLAENTTAIKNILKYLTRYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLEVVPNMHLSITLYCD
Subjt: MLAENTTAIKNILKYLTRYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLEVVPNMHLSITLYCD
Query: NSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLRGL
NSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIV KISSEQNMAD FTKALTAKVFESHLHGLGLRGL
Subjt: NSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLRGL
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| KAA0032291.1 gag/pol protein [Cucumis melo var. makuwa] | 5.0e-74 | 81.87 | Show/hide |
Query: AIKNILKY-----------------LTRYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLEVVPN
A+KNILKY LT +TDSDFQ DKDARKSTSGSVFTLNGGAVVWRSIKQSCIV S M+AEYVAACEA KEAVWLKKFLTDLEVVPN
Subjt: AIKNILKY-----------------LTRYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLEVVPN
Query: MHLSITLYCDNSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLRGL
MHLSITLYCDNSGAVANSR P+SHKRG HIERKYHLIREI+H+GDVIVTKISSEQNMADPFTKAL AKVFESHLH LGL GL
Subjt: MHLSITLYCDNSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLRGL
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| KAA0041899.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa] | 1.3e-74 | 79.57 | Show/hide |
Query: ENTTAIKNILKYLTR-----------------YTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLE
++ TA+KNILKYL R YTDSDFQTDKDARKSTSGS+FTLNGGAV+WRSIKQSCI S M+AEYVA CEA KEAVWLKKF TDLE
Subjt: ENTTAIKNILKYLTR-----------------YTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLE
Query: VVPNMHLSITLYCDNSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLRGL
VVPNMHL ITLYCDNSGAVANSR P+SHKRG HIERKYHLIREIVHRGDVIVTKIS EQN+ADPFTKALTAKVFES LHGLGLRGL
Subjt: VVPNMHLSITLYCDNSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLRGL
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| KAA0059674.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa] | 1.3e-74 | 78.49 | Show/hide |
Query: ENTTAIKNILKYLTR-----------------YTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLE
++ T +KNILKYL R YTDSDFQTDKD+RKSTSGSVFTLNGGAVVWR+IKQSCI S M+AE++ ACEA KEAVWLKKFLTDLE
Subjt: ENTTAIKNILKYLTR-----------------YTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLE
Query: VVPNMHLSITLYCDNSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLRGL
VVPNMHL ITLYCDNSGAVANSR P+SHKRG HIERKYHLIREI+HRGDVIVTKISSEQN+ADPFTKALTAKVFESHLHGLGLR L
Subjt: VVPNMHLSITLYCDNSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLRGL
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| TYK16863.1 gag/pol protein [Cucumis melo var. makuwa] | 6.5e-90 | 99.42 | Show/hide |
Query: MLAENTTAIKNILKYLTRYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLEVVPNMHLSITLYCD
MLAENTTAIKNILKYLTRYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLEVVPNMHLSITLYCD
Subjt: MLAENTTAIKNILKYLTRYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLEVVPNMHLSITLYCD
Query: NSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLRGL
NSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMAD FTKALTAKVFESHLHGLGLRGL
Subjt: NSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLRGL
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7SNZ8 Gag/pol protein | 1.6e-89 | 98.84 | Show/hide |
Query: MLAENTTAIKNILKYLTRYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLEVVPNMHLSITLYCD
MLAENTTAIKNILKYLTRYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLEVVPNMHLSITLYCD
Subjt: MLAENTTAIKNILKYLTRYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLEVVPNMHLSITLYCD
Query: NSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLRGL
NSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIV KISSEQNMAD FTKALTAKVFESHLHGLGLRGL
Subjt: NSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLRGL
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| A0A5A7SRW5 Gag/pol protein | 2.4e-74 | 81.87 | Show/hide |
Query: AIKNILKY-----------------LTRYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLEVVPN
A+KNILKY LT +TDSDFQ DKDARKSTSGSVFTLNGGAVVWRSIKQSCIV S M+AEYVAACEA KEAVWLKKFLTDLEVVPN
Subjt: AIKNILKY-----------------LTRYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLEVVPN
Query: MHLSITLYCDNSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLRGL
MHLSITLYCDNSGAVANSR P+SHKRG HIERKYHLIREI+H+GDVIVTKISSEQNMADPFTKAL AKVFESHLH LGL GL
Subjt: MHLSITLYCDNSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLRGL
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| A0A5A7TKJ0 Retrovirus-related pol polyprotein from transposon tnt 1-94 | 6.3e-75 | 79.57 | Show/hide |
Query: ENTTAIKNILKYLTR-----------------YTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLE
++ TA+KNILKYL R YTDSDFQTDKDARKSTSGS+FTLNGGAV+WRSIKQSCI S M+AEYVA CEA KEAVWLKKF TDLE
Subjt: ENTTAIKNILKYLTR-----------------YTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLE
Query: VVPNMHLSITLYCDNSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLRGL
VVPNMHL ITLYCDNSGAVANSR P+SHKRG HIERKYHLIREIVHRGDVIVTKIS EQN+ADPFTKALTAKVFES LHGLGLRGL
Subjt: VVPNMHLSITLYCDNSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLRGL
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| A0A5A7UX57 Retrovirus-related pol polyprotein from transposon tnt 1-94 | 6.3e-75 | 78.49 | Show/hide |
Query: ENTTAIKNILKYLTR-----------------YTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLE
++ T +KNILKYL R YTDSDFQTDKD+RKSTSGSVFTLNGGAVVWR+IKQSCI S M+AE++ ACEA KEAVWLKKFLTDLE
Subjt: ENTTAIKNILKYLTR-----------------YTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLE
Query: VVPNMHLSITLYCDNSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLRGL
VVPNMHL ITLYCDNSGAVANSR P+SHKRG HIERKYHLIREI+HRGDVIVTKISSEQN+ADPFTKALTAKVFESHLHGLGLR L
Subjt: VVPNMHLSITLYCDNSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLRGL
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| A0A5D3CY71 Gag/pol protein | 3.1e-90 | 99.42 | Show/hide |
Query: MLAENTTAIKNILKYLTRYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLEVVPNMHLSITLYCD
MLAENTTAIKNILKYLTRYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLEVVPNMHLSITLYCD
Subjt: MLAENTTAIKNILKYLTRYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLEVVPNMHLSITLYCD
Query: NSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLRGL
NSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMAD FTKALTAKVFESHLHGLGLRGL
Subjt: NSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLRGL
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 4.3e-20 | 37.5 | Show/hide |
Query: YTDSDFQTDKDARKSTSGSVFTL-NGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAVANSRVPKSHKRG
Y DSD+ + RKST+G +F + + + W + +Q+ + S +AEY+A EAV+EA+WLK LT + + + I +Y DN G ++ + P HKR
Subjt: YTDSDFQTDKDARKSTSGSVFTL-NGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAVANSRVPKSHKRG
Query: NHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGL
HI+ KYH RE V + + I +E +AD FTK L A F LGL
Subjt: NHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGL
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| P0CV72 Secreted RxLR effector protein 161 | 5.3e-10 | 50.79 | Show/hide |
Query: LTRYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWL
L Y+D+D+ D ++R+STSG +F LNGG V WRS KQ + S + EY+A EA +EAVWL
Subjt: LTRYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.4e-25 | 41.78 | Show/hide |
Query: LTRYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAVANSRVPKSHK
L YTD+D D D RKS++G +FT +GGA+ W+S Q C+ S +AEY+AA E KE +WLK+FL +L + ++ +YCD+ A+ S+ H
Subjt: LTRYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDLEVVPNMHLSITLYCDNSGAVANSRVPKSHK
Query: RGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFE
R HI+ +YH IRE+V + V KIS+ +N AD TK + FE
Subjt: RGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFE
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.2e-16 | 30.98 | Show/hide |
Query: ENTTAIKNILKYLT------------------RYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDL
E+ A+K IL+YL Y+D+D+ DKD ST+G + L + W S KQ +V S +AEY + E W+ LT+L
Subjt: ENTTAIKNILKYLT------------------RYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDL
Query: EVVPNMHLSITLYCDNSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGL
+ + +YCDN GA P H R HI YH IR V G + V +S+ +AD TK L+ F++ +G+
Subjt: EVVPNMHLSITLYCDNSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.2e-15 | 29.35 | Show/hide |
Query: ENTTAIKNILKYLT------------------RYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDL
++ A+K +L+YL Y+D+D+ D D ST+G + L + W S KQ +V S +AEY + E W+ LT+L
Subjt: ENTTAIKNILKYLT------------------RYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQSCIVFSIMDAEYVAACEAVKEAVWLKKFLTDL
Query: EVVPNMHLSITLYCDNSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGL
+ + +YCDN GA P H R HI YH IR V G + V +S+ +AD TK L+ F++ +G+
Subjt: EVVPNMHLSITLYCDNSGAVANSRVPKSHKRGNHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGL
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