| GenBank top hits | e value | %identity | Alignment |
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| KAA0032046.1 gag/pol protein [Cucumis melo var. makuwa] | 7.9e-85 | 98.75 | Show/hide |
Query: DLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAIANSREPR
DLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHL ITLYCDNSGA+ANSREPR
Subjt: DLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAIANSREPR
Query: SYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLYCL
SYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLYCL
Subjt: SYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLYCL
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| KAA0032291.1 gag/pol protein [Cucumis melo var. makuwa] | 7.9e-77 | 88.41 | Show/hide |
Query: MLVYGSKDLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAI
MLVYGSKDLI T +TDSDFQ +KDARKSTSGSVFTLNGGAVVWRSIKQSCIV STME EYVA C+AAKEA+WLKKF TDLE+ PNMHLSITLYCDNSGA+
Subjt: MLVYGSKDLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAI
Query: ANSREPRSYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGL
ANSREPRS+KRGKHIERKYHLIREI+H+GDVIVTKISSEQNMADPFTKAL AKVFESHLH LGL
Subjt: ANSREPRSYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGL
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| KAA0036988.1 gag/pol protein [Cucumis melo var. makuwa] | 2.7e-77 | 86.83 | Show/hide |
Query: MLVYGSKDLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAI
MLVYGSKDLI T YTDSDFQ+NK ARKSTSGSVFTLNGGAVVWRSIKQSCI DST+E EYVA C+AAKEA+WLKKF TDLEI PNMHLSITLYCDNSGA+
Subjt: MLVYGSKDLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAI
Query: ANSREPRSYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLYCL
ANSREPRS+KRGKHIER YHLIREIVH+G+V+VT ISSEQNMADPFTKALTAKVFESHL+GLGL+ L
Subjt: ANSREPRSYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLYCL
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| KAA0041899.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa] | 3.6e-77 | 87.8 | Show/hide |
Query: MLVYGSKDLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAI
MLVYGSKDLI T YTDSDFQ++KDARKSTSGS+FTLNGGAV+WRSIKQSCI +STME EYVATC+AAKEA+WLKKF TDLE+ PNMHL ITLYCDNSGA+
Subjt: MLVYGSKDLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAI
Query: ANSREPRSYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGL
ANSREPRS+KRGKHIERKYHLIREIVHRGDVIVTKIS EQN+ADPFTKALTAKVFES LHGLGL
Subjt: ANSREPRSYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGL
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| KAA0059674.1 retrovirus-related pol polyprotein from transposon tnt 1-94 [Cucumis melo var. makuwa] | 1.2e-77 | 85.63 | Show/hide |
Query: MLVYGSKDLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAI
MLVYGSKDLI T YTDSDFQ++KD+RKSTSGSVFTLNGGAVVWR+IKQSCI DSTME E++ C+AAKEA+WLKKF TDLE+ PNMHL ITLYCDNSGA+
Subjt: MLVYGSKDLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAI
Query: ANSREPRSYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLYCL
ANSREPRS+KRGKHIERKYHLIREI+HRGDVIVTKISSEQN+ADPFTKALTAKVFESHLHGLGL L
Subjt: ANSREPRSYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLYCL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SPW4 Gag/pol protein | 3.8e-85 | 98.75 | Show/hide |
Query: DLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAIANSREPR
DLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHL ITLYCDNSGA+ANSREPR
Subjt: DLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAIANSREPR
Query: SYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLYCL
SYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLYCL
Subjt: SYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLYCL
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| A0A5A7SRW5 Gag/pol protein | 3.8e-77 | 88.41 | Show/hide |
Query: MLVYGSKDLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAI
MLVYGSKDLI T +TDSDFQ +KDARKSTSGSVFTLNGGAVVWRSIKQSCIV STME EYVA C+AAKEA+WLKKF TDLE+ PNMHLSITLYCDNSGA+
Subjt: MLVYGSKDLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAI
Query: ANSREPRSYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGL
ANSREPRS+KRGKHIERKYHLIREI+H+GDVIVTKISSEQNMADPFTKAL AKVFESHLH LGL
Subjt: ANSREPRSYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGL
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| A0A5A7T2H7 Gag/pol protein | 1.3e-77 | 86.83 | Show/hide |
Query: MLVYGSKDLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAI
MLVYGSKDLI T YTDSDFQ+NK ARKSTSGSVFTLNGGAVVWRSIKQSCI DST+E EYVA C+AAKEA+WLKKF TDLEI PNMHLSITLYCDNSGA+
Subjt: MLVYGSKDLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAI
Query: ANSREPRSYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLYCL
ANSREPRS+KRGKHIER YHLIREIVH+G+V+VT ISSEQNMADPFTKALTAKVFESHL+GLGL+ L
Subjt: ANSREPRSYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLYCL
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| A0A5A7TKJ0 Retrovirus-related pol polyprotein from transposon tnt 1-94 | 1.7e-77 | 87.8 | Show/hide |
Query: MLVYGSKDLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAI
MLVYGSKDLI T YTDSDFQ++KDARKSTSGS+FTLNGGAV+WRSIKQSCI +STME EYVATC+AAKEA+WLKKF TDLE+ PNMHL ITLYCDNSGA+
Subjt: MLVYGSKDLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAI
Query: ANSREPRSYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGL
ANSREPRS+KRGKHIERKYHLIREIVHRGDVIVTKIS EQN+ADPFTKALTAKVFES LHGLGL
Subjt: ANSREPRSYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGL
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| A0A5A7UX57 Retrovirus-related pol polyprotein from transposon tnt 1-94 | 5.9e-78 | 85.63 | Show/hide |
Query: MLVYGSKDLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAI
MLVYGSKDLI T YTDSDFQ++KD+RKSTSGSVFTLNGGAVVWR+IKQSCI DSTME E++ C+AAKEA+WLKKF TDLE+ PNMHL ITLYCDNSGA+
Subjt: MLVYGSKDLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAI
Query: ANSREPRSYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLYCL
ANSREPRS+KRGKHIERKYHLIREI+HRGDVIVTKISSEQN+ADPFTKALTAKVFESHLHGLGL L
Subjt: ANSREPRSYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGLYCL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.4e-20 | 36.84 | Show/hide |
Query: YTDSDFQSNKDARKSTSGSVFTL-NGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAIANSREPRSYKRG
Y DSD+ ++ RKST+G +F + + + W + +Q+ + S+ E EY+A +A +EA+WLK T + I + I +Y DN G I+ + P +KR
Subjt: YTDSDFQSNKDARKSTSGSVFTL-NGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAIANSREPRSYKRG
Query: KHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGL
KHI+ KYH RE V + + I +E +AD FTK L A F LGL
Subjt: KHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGL
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| P0CV72 Secreted RxLR effector protein 161 | 3.3e-09 | 48.33 | Show/hide |
Query: YTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWL
Y+D+D+ + ++R+STSG +F LNGG V WRS KQ + S+ E EY+A +A +EA+WL
Subjt: YTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.8e-27 | 40.65 | Show/hide |
Query: LVYGSKDLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAIA
L +G D I YTD+D + D RKS++G +FT +GGA+ W+S Q C+ ST E EY+A + KE IWLK+F +L + ++ +YCD+ AI
Subjt: LVYGSKDLIFTRYTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAIA
Query: NSREPRSYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFE
S+ + R KHI+ +YH IRE+V + V KIS+ +N AD TK + FE
Subjt: NSREPRSYKRGKHIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFE
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.2e-16 | 32.45 | Show/hide |
Query: YTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAIANSREPRSYKRGK
Y+D+D+ +KD ST+G + L + W S KQ +V S+ E EY + + E W+ T+L I + +YCDN GA P + R K
Subjt: YTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAIANSREPRSYKRGK
Query: HIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGL
HI YH IR V G + V +S+ +AD TK L+ F++ +G+
Subjt: HIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 3.1e-15 | 31.79 | Show/hide |
Query: YTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAIANSREPRSYKRGK
Y+D+D+ + D ST+G + L + W S KQ +V S+ E EY + + E W+ T+L I + +YCDN GA P + R K
Subjt: YTDSDFQSNKDARKSTSGSVFTLNGGAVVWRSIKQSCIVDSTMEVEYVATCKAAKEAIWLKKFFTDLEIFPNMHLSITLYCDNSGAIANSREPRSYKRGK
Query: HIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGL
HI YH IR V G + V +S+ +AD TK L+ F++ +G+
Subjt: HIERKYHLIREIVHRGDVIVTKISSEQNMADPFTKALTAKVFESHLHGLGL
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