| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0032046.1 gag/pol protein [Cucumis melo var. makuwa] | 2.7e-59 | 99.15 | Show/hide |
Query: VGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL
VGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL
Subjt: VGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL
Query: MYGMLYTRPDICYSVGM
MYGMLYTRP+ICYSVGM
Subjt: MYGMLYTRPDICYSVGM
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| KAA0067819.1 gag/pol protein [Cucumis melo var. makuwa] | 5.9e-59 | 88.72 | Show/hide |
Query: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
MYVDDILLIGNDVG+LTDIKKWLA QFQMKDLGNAQYVLG +IVRNRKNK LAMSQTSYIDKMLSRYKMQNSKKG+LPY GIHLSKEQCPKTPQEVEDM
Subjt: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
Query: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
SNI YA A+GSLMY ML T PDICYSVG+VSRY
Subjt: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 4.1e-60 | 90.15 | Show/hide |
Query: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
+YVDDILLIGNDVG+L DIKKWLAMQFQMKDLGNAQYVLG +IVRNRKNK LAMSQTSYIDKMLSRYKM NSKKG+LPYR GIHLSKEQCPKTPQEVEDM
Subjt: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
Query: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSR
SNIPYASAVGSLMY ML TRP+ICYSVG+VSR
Subjt: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSR
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| TYK11050.1 gag/pol protein [Cucumis melo var. makuwa] | 2.0e-59 | 87.97 | Show/hide |
Query: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
+YVDDILLIGNDVG+LTDIK+WLA QFQMKDLGNAQYVLG +IVRN KNK LAMSQTSYIDKMLSRYKMQNSKKG+LPYR GIHLSKEQCPKTPQEVEDM
Subjt: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
Query: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
SNIPYASA+GSLMY ML TR DICYSVG+V+RY
Subjt: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
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| TYK29680.1 putative polyprotein [Cucumis melo var. makuwa] | 3.5e-59 | 87.22 | Show/hide |
Query: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
+Y DDILLIGND+G+LTDIK+WLA QFQMK LGNAQYVLG +IVRN+KNK LAMSQTSYIDKMLSRYKMQNSKKG+LPYR GIHLSKEQCPKTPQEVEDM
Subjt: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
Query: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
SNIPYASAVGSLMY ML TRP+ICYSVG+VSRY
Subjt: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SPW4 Gag/pol protein | 1.3e-59 | 99.15 | Show/hide |
Query: VGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL
VGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL
Subjt: VGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDMSNIPYASAVGSL
Query: MYGMLYTRPDICYSVGM
MYGMLYTRP+ICYSVGM
Subjt: MYGMLYTRPDICYSVGM
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| A0A5A7VRN6 Gag/pol protein | 2.9e-59 | 88.72 | Show/hide |
Query: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
MYVDDILLIGNDVG+LTDIKKWLA QFQMKDLGNAQYVLG +IVRNRKNK LAMSQTSYIDKMLSRYKMQNSKKG+LPY GIHLSKEQCPKTPQEVEDM
Subjt: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
Query: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
SNI YA A+GSLMY ML T PDICYSVG+VSRY
Subjt: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
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| A0A5D3BX45 Gag/pol protein | 2.0e-60 | 90.15 | Show/hide |
Query: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
+YVDDILLIGNDVG+L DIKKWLAMQFQMKDLGNAQYVLG +IVRNRKNK LAMSQTSYIDKMLSRYKM NSKKG+LPYR GIHLSKEQCPKTPQEVEDM
Subjt: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
Query: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSR
SNIPYASAVGSLMY ML TRP+ICYSVG+VSR
Subjt: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSR
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| A0A5D3CI71 Gag/pol protein | 9.9e-60 | 87.97 | Show/hide |
Query: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
+YVDDILLIGNDVG+LTDIK+WLA QFQMKDLGNAQYVLG +IVRN KNK LAMSQTSYIDKMLSRYKMQNSKKG+LPYR GIHLSKEQCPKTPQEVEDM
Subjt: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
Query: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
SNIPYASA+GSLMY ML TR DICYSVG+V+RY
Subjt: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
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| A0A5D3E2A3 Putative polyprotein | 1.7e-59 | 87.22 | Show/hide |
Query: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
+Y DDILLIGND+G+LTDIK+WLA QFQMK LGNAQYVLG +IVRN+KNK LAMSQTSYIDKMLSRYKMQNSKKG+LPYR GIHLSKEQCPKTPQEVEDM
Subjt: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
Query: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
SNIPYASAVGSLMY ML TRP+ICYSVG+VSRY
Subjt: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 3.3e-12 | 32.85 | Show/hide |
Query: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHL----SKEQCPKTPQE
+YVDD+++ D+ + + K++L +F+M DL ++ +G +I +++KI +SQ++Y+ K+LS++ M+N P I+ S E C
Subjt: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHL----SKEQCPKTPQE
Query: VEDMSNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
N P S +G LMY ML TRPD+ +V ++SRY
Subjt: VEDMSNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.3e-31 | 48.87 | Show/hide |
Query: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
+YVDD+L++G D G + +K L+ F MKDLG AQ +LG KIVR R ++ L +SQ YI+++L R+ M+N+K P + LSK+ CP T +E +M
Subjt: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
Query: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
+ +PY+SAVGSLMY M+ TRPDI ++VG+VSR+
Subjt: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
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| P25600 Putative transposon Ty5-1 protein YCL074W | 1.2e-06 | 31.58 | Show/hide |
Query: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
+YVDD+L+ +K+ L + MKDLG LG I N + +S YI K S ++ K P C SK T ++D+
Subjt: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
Query: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
+ PY S VG L++ RPDI Y V ++SR+
Subjt: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.0e-08 | 35.34 | Show/hide |
Query: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
+YVDDIL+ GND L + L+ +F +KD Y LG I R L +SQ YI +L+R M +K P LS K E
Subjt: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
Query: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
Y VGSL Y + +TRPDI Y+V +S++
Subjt: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.7e-09 | 33.83 | Show/hide |
Query: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
+YVDDIL+ GND L L+ +F +K+ + Y LG I R + L +SQ Y +L+R M +K P L+ K P E
Subjt: MYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGNAQYVLGSKIVRNRKNKILAMSQTSYIDKMLSRYKMQNSKKGMLPYRCGIHLSKEQCPKTPQEVEDM
Query: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
Y VGSL Y + +TRPD+ Y+V +S+Y
Subjt: SNIPYASAVGSLMYGMLYTRPDICYSVGMVSRY
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