; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc05g0129671 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0129671
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr05:7807090..7808079
RNA-Seq ExpressionCmc05g0129671
SyntenyCmc05g0129671
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019158165.1 PREDICTED: uncharacterized protein LOC109154882 [Ipomoea nil]5.1e-12062.61Show/hide
Query:  MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAP
        +T+V N   E +PTR+ N W + IDYRKLN VT KDHFPLPF+DQM+E+L G+SYFCFLDG+ G+++ PIA  DQ +TT TC FGTF ++ MPFGLCNAP
Subjt:  MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAP

Query:  VTFQRCMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDV
         TFQRCM+SIF+D+VG  IEVFMDDFTVYG  F  CL++L LILKR I++NLVL  EKCH M +   VL H++S  GIEVDKAK+D++++ PYPT++++V
Subjt:  VTFQRCMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDV

Query:  RSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLN
        RSFL  A FYRRFIKDFSKI LPL  LL+K+  F  D KC  AFD LK+ LTS+ I+Q PNWN PFEIMCDA+ +A+GAVLGQ +    H  Y+ASRTLN
Subjt:  RSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLN

Query:  SAQANYSITEKEFLSIIFVLHKFHSYIIG
         AQ NYS TEKE L+I+F L KF SY++G
Subjt:  SAQANYSITEKEFLSIIFVLHKFHSYIIG

XP_021603241.1 uncharacterized protein LOC110608326 [Manihot esculenta]8.8e-12062.31Show/hide
Query:  MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAP
        +T+  NS+GE +PTRV N W + IDYRKLN VT KDHFPLPF+DQM+E+L GKS+FC LDGF GFY+ P+A  DQ +TT TC FGTF ++ MPFGLCNAP
Subjt:  MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAP

Query:  VTFQRCMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDV
         TFQRCM+SIF++FV K IEVFMDDFTVYG  F  CL +L  ILKR +++NLVL +EKCH M    ++L H VS  GIEVDKAK+D++++ PYPT ++D+
Subjt:  VTFQRCMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDV

Query:  RSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLN
        RSFL  A FYRRFIKDFS+I  PL  LL+KDVPF  D++C  AF+TLK+KL ++ I+Q PNW+ PFEIMCDA+ YALGAVLGQ +D K H   +ASRTL+
Subjt:  RSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLN

Query:  SAQANYSITEKEFLSIIFVLHKFHSYIIG
         AQ+NY+ TEKE L+I+F L +F SY++G
Subjt:  SAQANYSITEKEFLSIIFVLHKFHSYIIG

XP_021603805.1 uncharacterized protein LOC110608820, partial [Manihot esculenta]2.3e-12062.01Show/hide
Query:  MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAP
        +TIV NS+GE +PTRV N W + +DYRKLN  T KDHFPLPF+DQM+E+L GKS++C LDG+ GFY+ P+A  DQ +TT TC FGTF F+ MPFGLCNAP
Subjt:  MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAP

Query:  VTFQRCMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDV
         TFQRCM+SIF+D+V K IEVFMDDFTVYG  F+ C+ +LE IL R ++TNLVL +EKCH M +H ++L H+VS  GIEVDKAK+D ++N PYPTS++++
Subjt:  VTFQRCMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDV

Query:  RSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLN
        RSFL  A FYRRFIKDFSKIT PL  LL++DVPF  DD C  AF+ +K  L S+ I+Q P+W LPFEIMC+A+ +A+GAVLGQ V N  H  ++ASRTL+
Subjt:  RSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLN

Query:  SAQANYSITEKEFLSIIFVLHKFHSYIIG
        +AQ NYS TEKE L+++F L KF SY++G
Subjt:  SAQANYSITEKEFLSIIFVLHKFHSYIIG

XP_021722788.1 uncharacterized protein LOC110690271 [Chenopodium quinoa]7.4e-11962.61Show/hide
Query:  MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAP
        +T+VEN QGE +PTRV N W + IDYR+LN VT KDHFPLPF+DQMIE+L GKSY+CFLDG+ G+++ PIA  DQ +TT TC FGTF ++ MPFGLCNAP
Subjt:  MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAP

Query:  VTFQRCMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDV
         TFQRCM+SIF++FV  ++EVFMDDFTVYG  F  CL+ L ++LKR ID+NLVL  EKCH M    IVL H+VS  GIEVDKAKID +Q+ PYPT++++V
Subjt:  VTFQRCMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDV

Query:  RSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLN
        RSFL  A FYRRFI+ FSK+   +  LL+KDV F  DD C  AFD LK KL S+ I+Q P+W+LPFEIMCDA+ YA+GAVLGQ V    H  Y+AS TLN
Subjt:  RSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLN

Query:  SAQANYSITEKEFLSIIFVLHKFHSYIIG
        SAQ NY+ TEKE L+++F L KF SY++G
Subjt:  SAQANYSITEKEFLSIIFVLHKFHSYIIG

XP_023758997.1 uncharacterized protein LOC111907462 [Lactuca sativa]2.8e-11862.01Show/hide
Query:  MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAP
        +T+VEN++G  +PTRV N W + IDYRKLN  T KDHFPLPF+DQM+E+L GKS++C LDG+ GF++ P+A  DQ +TT TC FGTF ++ MPFGLCNAP
Subjt:  MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAP

Query:  VTFQRCMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDV
         TFQRCM+SIF+++V   IEVFMDDFTVYG  F  CL +L  ILKR I+TNLVL FEKCH M S  ++L H+VS  GIEVDKAKID++Q+ PYPT +++V
Subjt:  VTFQRCMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDV

Query:  RSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLN
        RSFL  A FYRRFIKDFSKIT P+  LL+K+V F  ++ C  AFD LK+ LTS+ I+Q PNW+LPFEIMCDA+ YA+GAVLGQ      H  Y+ASRTL+
Subjt:  RSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLN

Query:  SAQANYSITEKEFLSIIFVLHKFHSYIIG
        +AQ+NYS TEKE L+I+F L KF  Y++G
Subjt:  SAQANYSITEKEFLSIIFVLHKFHSYIIG

TrEMBL top hitse value%identityAlignment
A0A251UM01 Putative reverse transcriptase domain, Ribonuclease H-like domain protein4.4e-11760.79Show/hide
Query:  MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAP
        +T+ EN QGE +PTRV N W + IDYRKLN  T KDHFPLPF+DQM+E+L GK+++C LDG+ GF++ P+A  DQ +TT TC FGTF ++ MPFGLCNAP
Subjt:  MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAP

Query:  VTFQRCMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDV
         TFQRCM+SIF+D+V + IEVFMDDFTVYG  F  CL +L  IL+R I+TNLVL +EKCH M    I+L H+VS  G+EVDKAKID++++ PYP S+++V
Subjt:  VTFQRCMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDV

Query:  RSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLN
        RSFL  A FYRRFIKDFSKIT P+  LL+KDV FV  + C  AFDTLK+ L ++ I+Q P+W+LPFEIMCDA+ +A+GAVLGQ  D   H  Y+AS+TL+
Subjt:  RSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLN

Query:  SAQANYSITEKEFLSIIFVLHKFHSYIIG
         AQ+NYS TEKE L+I+F L KF  Y++G
Subjt:  SAQANYSITEKEFLSIIFVLHKFHSYIIG

A0A2H9ZWR7 RNA-directed DNA polymerase like2.2e-11661.09Show/hide
Query:  MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAP
        +TI++N + E +PTRV +SW + IDYRKLN  T KDHFPLPF+DQM+E+L G S++CFLDG+ G+ + PIA  DQ +TT TC FGTF FK MPFGLCNAP
Subjt:  MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAP

Query:  VTFQRCMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDV
         TFQRCML+IF+D V   IEVF+DDF+V+G  F +CL +L  ILKR I+ NL L +EKCH M    IVL H+VS  GIEVDKAK+DL+ N P PTSLK+V
Subjt:  VTFQRCMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDV

Query:  RSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLN
        RSFL  A FYRRFIKDFSKI  PL+NLL KD+PF    +C+ +F+ LK  L SS IL+ P W  PFE+MCDA+ YALGA+LGQ +DNK H  ++AS TLN
Subjt:  RSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLN

Query:  SAQANYSITEKEFLSIIFVLHKFHSYIIG
         AQ NY++TEKEFL+++F   KF SY++G
Subjt:  SAQANYSITEKEFLSIIFVLHKFHSYIIG

A0A445FCZ8 Reverse transcriptase9.8e-11761.4Show/hide
Query:  MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAP
        +T++ N +GE IPTRV NSW + IDYR+LN+VT KDHFPLPF+DQM+E L GKS++CFLDGF G+ +  IA  DQ +TT TC FGTF ++ MPFGLCNAP
Subjt:  MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAP

Query:  VTFQRCMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDV
         TFQRCM+SIF+DF+   IEVFMDDFTVYG  F  CLNSLE +L R I+TNLVL FEKCH M    IVL H++S  GIEVD AKI ++   PYP+ +++V
Subjt:  VTFQRCMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDV

Query:  RSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLN
        RSFL  A FYRRFI+DFSK+ LPL NLL+K+V F  +D+C  AFD LK  LT++ I+Q P+W  PFE+MCDA+ YALGAVL Q +D      Y+ASRTL+
Subjt:  RSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLN

Query:  SAQANYSITEKEFLSIIFVLHKFHSYIIG
         AQANY+ TEKE L+I+F L KF SY++G
Subjt:  SAQANYSITEKEFLSIIFVLHKFHSYIIG

A0A6P6GDJ4 Reverse transcriptase8.8e-11862.31Show/hide
Query:  MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAP
        MT+ EN + E IPTR+   W + IDYRKLN+ T KDHFPLPF+DQM+E+L GK Y+CFLDG+ G+ +  IA  DQ +TT TC +GTF ++ MPFGLCNAP
Subjt:  MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAP

Query:  VTFQRCMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDV
         TFQRCM+SIF+D V   IE+FMDDF+V+G  F  CL +L  +L R  +TNLVL +EKCH M    IVL H VS  GIEVDKAKI++++  P PTS+K +
Subjt:  VTFQRCMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDV

Query:  RSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLN
        RSFL  A FYRRFIKDFSKIT PL NLL KDVPFV DD+CMHAF+ LK+KL  + I+ TPNWNLPFEIMCDA+ YA+GAVLGQ  D KLH  Y+ASRTLN
Subjt:  RSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLN

Query:  SAQANYSITEKEFLSIIFVLHKFHSYIIG
         AQ NY+ TEKE L+I+F   KF +Y++G
Subjt:  SAQANYSITEKEFLSIIFVLHKFHSYIIG

A0A6P8DCT8 Reverse transcriptase1.3e-11660.49Show/hide
Query:  MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAP
        +T+V+N +GE +PTRV N W + IDYRKLN  T KDHFPLPF+DQM+E+L GKSYFCFLDG+ G+Y+  +A  DQ +TT TC FGTF ++ MPFGLC+AP
Subjt:  MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAP

Query:  VTFQRCMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDV
         TFQRCM+SIF+D +   IEVFMDDFTVYG  F  CL +L  +L R I++NLVL +EKCH M +H IVL H++S  GIEVDK+K+DL+ N PYP++++ +
Subjt:  VTFQRCMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDV

Query:  RSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLN
        RSFL  A FYRRFIKDFSKI  PL +LL+KD  FV    C  AFD LK+ LTS+ I+Q P+W LPFEIM DA+ YA+GAVLGQ +D + H  Y+AS+TL+
Subjt:  RSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLN

Query:  SAQANYSITEKEFLSIIFVLHKFHSYIIG
        +AQ NYS TEKE L+I+F L KF SY++G
Subjt:  SAQANYSITEKEFLSIIFVLHKFHSYIIG

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.64.5e-5035.6Show/hide
Query:  IFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAPVTFQRCMLSIFTDFVGKWIEV
        I IDYRKLNE+T+ D  P+P +D+++ +LG  +YF  +D   GF++  +      +T  + + G +++  MPFGL NAP TFQRCM  I    + K   V
Subjt:  IFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAPVTFQRCMLSIFTDFVGKWIEV

Query:  FMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDVRSFLHSARFYRRFIKDFSKIT
        ++DD  V+       L SL L+ ++    NL L+ +KC  +   +  L H+++  GI+ +  KI+ +Q +P PT  K++++FL    +YR+FI +F+ I 
Subjt:  FMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDVRSFLHSARFYRRFIKDFSKIT

Query:  LPLTNLLKKDVPF-VIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLNSAQANYSITEKEFLSIIFVL
         P+T  LKK++     + +   AF  LK  ++   IL+ P++   F +  DA+  ALGAVL Q      H   + SRTLN  + NYS  EKE L+I++  
Subjt:  LPLTNLLKKDVPF-VIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLNSAQANYSITEKEFLSIIFVL

Query:  HKFHSYIIG
          F  Y++G
Subjt:  HKFHSYIIG

P10394 Retrovirus-related Pol polyprotein from transposon 4123.9e-4634.7Show/hide
Query:  PTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAPVTFQRCMLSIFT
        P      W + IDYR++N+  L D FPLP +D +++QLG   YF  LD   GF++  +    +  T+ +   G++ F  +PFGL  AP +FQR M   F+
Subjt:  PTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAPVTFQRCMLSIFT

Query:  DFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDVRSFLHSARFYRR
                ++MDD  V G    + L +L  +  +  + NL L  EKC         L H  +  GI  D  K D++QN+P P      R F+    +YRR
Subjt:  DFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDVRSFLHSARFYRR

Query:  FIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLNSAQANYSITEKE
        FIK+F+  +  +T L KK+VPF   D+C  AF  LK +L + ++LQ P+++  F I  DA+  A GAVL Q  +       +ASR     ++N S TE+E
Subjt:  FIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLNSAQANYSITEKE

Query:  FLSIIFVLHKFHSYIIG
          +I + +  F  YI G
Subjt:  FLSIIFVLHKFHSYIIG

P10401 Retrovirus-related Pol polyprotein from transposon gypsy1.7e-4131.87Show/hide
Query:  IFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAPVTFQRCMLSIFTDFVGKWIEV
        + ID+RKLNE T+ D +P+P +  ++  LG   +F  LD   G+++  +A  D+ +T+ +   G ++F  +PFGL NA   FQR +  +  + +GK   V
Subjt:  IFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAPVTFQRCMLSIFTDFVGKWIEV

Query:  FMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDVRSFLHSARFYRRFIKDFSKIT
        ++DD  ++  +    +  ++ +LK  ID N+ +  EK          L  +VS  G + D  K+  +Q +P P  +  VRSFL  A +YR FIKDF+ I 
Subjt:  FMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDVRSFLHSARFYRRFIKDFSKIT

Query:  LPLTNLLK-----------KDVPFVIDDKCMHAFDTLKDKLTSSS-ILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLNSAQANYSIT
         P+T++LK           K +P   ++   +AF  L++ L S   IL+ P++  PF++  DA+   +GAVL Q    +       SRTL   + NY+  
Subjt:  LPLTNLLK-----------KDVPFVIDDKCMHAFDTLKDKLTSSS-ILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLNSAQANYSIT

Query:  EKEFLSIIFVLHKFHSYIIG
        E+E L+I++ L K  +++ G
Subjt:  EKEFLSIIFVLHKFHSYIIG

P20825 Retrovirus-related Pol polyprotein from transposon 2972.8e-5235.35Show/hide
Query:  SNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAPVTFQRCMLSIFTDFVG
        +N + + IDYRKLNE+T+ D +P+P +D+++ +LG   YF  +D   GF++  +      +T  + + G +++  MPFGL NAP TFQRCM +I    + 
Subjt:  SNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAPVTFQRCMLSIFTDFVG

Query:  KWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDVRSFLHSARFYRRFIKD
        K   V++DD  ++       LNS++L+  +  D NL L+ +KC  +   +  L H+V+  GI+ +  K+  + ++P PT  K++R+FL    +YR+FI +
Subjt:  KWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDVRSFLHSARFYRRFIKD

Query:  FSKITLPLTNLLKKDVPFVIDD-KCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLNSAQANYSITEKEFLS
        ++ I  P+T+ LKK         + + AF+ LK  +    ILQ P++   F +  DA+  ALGAVL Q      H   F SRTLN  + NYS  EKE L+
Subjt:  FSKITLPLTNLLKKDVPFVIDD-KCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLNSAQANYSITEKEFLS

Query:  IIFVLHKFHSYIIG
        I++    F  Y++G
Subjt:  IIFVLHKFHSYIIG

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus3.8e-4933.75Show/hide
Query:  IDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAPVTFQRCMLSIFTDFVGKWIEVFM
        +D+++LN VT+ D +P+P ++  +  LG   YF  LD   GF++  +   D  +T  +   G ++F  +PFGL NAP  FQR +  I  + +GK   V++
Subjt:  IDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAPVTFQRCMLSIFTDFVGKWIEVFM

Query:  DDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDVRSFLHSARFYRRFIKDFSKITLP
        DD  V+  D+     +L L+L      NL +  EK H + +    L ++V+  GI+ D  K+  +   P PTS+K+++ FL    +YR+FI+D++K+  P
Subjt:  DDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDVRSFLHSARFYRRFIKDFSKITLP

Query:  LTNLLK-----------KDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLNSAQANYSITEKE
        LTNL +             VP  +D+  + +F+ LK  L SS IL  P +  PF +  DA+ +A+GAVL Q    +     + SR+LN  + NY+  EKE
Subjt:  LTNLLK-----------KDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLNSAQANYSITEKE

Query:  FLSIIFVLHKFHSYIIG
         L+II+ L    +Y+ G
Subjt:  FLSIIFVLHKFHSYIIG

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein1.3e-1237.11Show/hide
Query:  RHLVSFMGIEVDKAKIDLVQNFPYPTSLKDVRSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPF
        RH++S  G+  D AK++ +  +P P +  ++R FL    +YRRF+K++ KI  PLT LLKK+      +    AF  LK  +T+  +L  P+  LPF
Subjt:  RHLVSFMGIEVDKAKIDLVQNFPYPTSLKDVRSFLHSARFYRRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCATTGTGGAAAATAGCCAAGGTGAGTTCATTCCTACTCGTGTTTCAAATAGTTGGTGCATATTTATTGATTATAGAAAGCTAAATGAGGTAACTCTTAAA
GATCACTTCCCTTTACCTTTTCTAGATCAAATGATTGAACAACTAGGAGGGAAATCTTACTTTTGCTTTCTAGATGGATTCTTTGGATTTTATCGAACACCCATT
GCATGTGTAGACCAATATAGGACCACAATTACATGTGAATTTGGAACTTTTGATTTTAAAATAATGCCCTTTGGACTATGTAATGCTCCTGTAACATTTCAAAGA
TGCATGTTAAGCATATTCACTGATTTCGTAGGAAAATGGATAGAAGTGTTCATGGATGATTTCACAGTTTATGGGTACGATTTTTATTATTGCTTGAATAGTTTA
GAGTTGATTTTAAAGAGATCCATTGATACTAACTTAGTGCTTAAATTTGAAAAGTGTCATTCAATGGCCTCTCACAGTATAGTACTACGACACTTAGTATCATTT
ATGGGAATAGAAGTTGACAAAGCCAAAATTGATCTAGTTCAAAACTTCCCCTACCCCACTTCTTTAAAAGATGTTAGATCATTTTTGCATAGTGCCAGATTTTAT
AGAAGGTTCATAAAAGACTTTTCTAAGATAACTTTGCCTTTGACAAATTTACTTAAAAAAGATGTCCCTTTTGTAATTGATGACAAATGCATGCATGCTTTTGAT
ACTTTGAAAGATAAATTGACTTCTTCTTCAATCTTGCAAACACCTAATTGGAACTTACCATTTGAAATAATGTGTGATGCAAATTATTATGCATTAGGTGCAGTG
CTAGGACAAATAGTAGATAACAAATTGCATGCTACATATTTCGCATCTCGAACTCTGAACTCTGCTCAAGCTAATTACTCCATAACTGAAAAAGAGTTTTTGTCT
ATAATCTTTGTTCTTCATAAGTTCCATAGCTACATAATTGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGACCATTGTGGAAAATAGCCAAGGTGAGTTCATTCCTACTCGTGTTTCAAATAGTTGGTGCATATTTATTGATTATAGAAAGCTAAATGAGGTAACTCTTAAA
GATCACTTCCCTTTACCTTTTCTAGATCAAATGATTGAACAACTAGGAGGGAAATCTTACTTTTGCTTTCTAGATGGATTCTTTGGATTTTATCGAACACCCATT
GCATGTGTAGACCAATATAGGACCACAATTACATGTGAATTTGGAACTTTTGATTTTAAAATAATGCCCTTTGGACTATGTAATGCTCCTGTAACATTTCAAAGA
TGCATGTTAAGCATATTCACTGATTTCGTAGGAAAATGGATAGAAGTGTTCATGGATGATTTCACAGTTTATGGGTACGATTTTTATTATTGCTTGAATAGTTTA
GAGTTGATTTTAAAGAGATCCATTGATACTAACTTAGTGCTTAAATTTGAAAAGTGTCATTCAATGGCCTCTCACAGTATAGTACTACGACACTTAGTATCATTT
ATGGGAATAGAAGTTGACAAAGCCAAAATTGATCTAGTTCAAAACTTCCCCTACCCCACTTCTTTAAAAGATGTTAGATCATTTTTGCATAGTGCCAGATTTTAT
AGAAGGTTCATAAAAGACTTTTCTAAGATAACTTTGCCTTTGACAAATTTACTTAAAAAAGATGTCCCTTTTGTAATTGATGACAAATGCATGCATGCTTTTGAT
ACTTTGAAAGATAAATTGACTTCTTCTTCAATCTTGCAAACACCTAATTGGAACTTACCATTTGAAATAATGTGTGATGCAAATTATTATGCATTAGGTGCAGTG
CTAGGACAAATAGTAGATAACAAATTGCATGCTACATATTTCGCATCTCGAACTCTGAACTCTGCTCAAGCTAATTACTCCATAACTGAAAAAGAGTTTTTGTCT
ATAATCTTTGTTCTTCATAAGTTCCATAGCTACATAATTGGATAA
Protein sequenceShow/hide protein sequence
MTIVENSQGEFIPTRVSNSWCIFIDYRKLNEVTLKDHFPLPFLDQMIEQLGGKSYFCFLDGFFGFYRTPIACVDQYRTTITCEFGTFDFKIMPFGLCNAPVTFQR
CMLSIFTDFVGKWIEVFMDDFTVYGYDFYYCLNSLELILKRSIDTNLVLKFEKCHSMASHSIVLRHLVSFMGIEVDKAKIDLVQNFPYPTSLKDVRSFLHSARFY
RRFIKDFSKITLPLTNLLKKDVPFVIDDKCMHAFDTLKDKLTSSSILQTPNWNLPFEIMCDANYYALGAVLGQIVDNKLHATYFASRTLNSAQANYSITEKEFLS
IIFVLHKFHSYIIG