; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc05g0129751 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0129751
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr05:7876737..7877492
RNA-Seq ExpressionCmc05g0129751
SyntenyCmc05g0129751
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004672 - protein kinase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019153451.1 PREDICTED: uncharacterized protein LOC109149915 [Ipomoea nil]3.0e-11275.5Show/hide
Query:  KEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQI
        KE+LKL +AGIIYPISDS WVSP+HVVPKKTG+TVV+N  +E+V MR+QNGWRMCID+RKLN  T+KDHFPLPF+DQM+ERLAG+S FCFLDGFS +YQI
Subjt:  KEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQI

Query:  HIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGIV
         IA EDQ+KTTFTC +GT+AFRRMPFGLCNAPGTFQRCMMSIF +FI+ CIEVF+DDFTVYGDSF+ CL +L  +L RCI+ NL LNYEKCHFMVS GIV
Subjt:  HIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGIV

Query:  LGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF
        LGH++ +KGIEVDKAK D+I  LPYPT +++VRSF+G  GFYRRFIKDF
Subjt:  LGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF

XP_031112037.1 uncharacterized protein LOC116016008 [Ipomoea triloba]2.1e-11376.71Show/hide
Query:  KEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQI
        KEVLKL +AGIIYPISDS WVSP+HVVPKKTG+TVVKN   E+V MR+QNGWRMCID+RKLN  T+KDHFPLPF+DQM+ERLAG+S FCFLDGFS +YQI
Subjt:  KEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQI

Query:  HIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGIV
         IA EDQ+KTTFTC +GT+AFRRMPFGLCNAPGTFQRCMMSIF +FI+ CIEVF+DDFTVYGDSF+ CL +L  +L RCI+ NL LNYEKCHFMVS GIV
Subjt:  HIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGIV

Query:  LGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF
        LGH++S+KGIEVDKAK D+I  LPYPT +++VRSF+G  GFYRRFIKDF
Subjt:  LGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF

XP_031392309.1 uncharacterized protein LOC116204368 [Punica granatum]3.0e-11274Show/hide
Query:  MKEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQ
        MKE+LKL + GIIYPISDS WVSPIHVVPKKTG+T+VKN+  E+V  R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLAG+SYFCFLDG+S +YQ
Subjt:  MKEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQ

Query:  IHIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGI
        I +A EDQ+KTTFTC +GT+A+RRMPFGLC+APGTFQRCMMSIF D I+ CIEVF+DDFTVYGDSFD CL +L  +L+RCIE+NL LNYEKCHFMV+HGI
Subjt:  IHIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGI

Query:  VLGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF
        VLGH++SS+GIEVDK+K D+I  LPYP+ ++ +RSF+G  GFYRRFIKDF
Subjt:  VLGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF

XP_031393661.1 uncharacterized protein LOC116205261 [Punica granatum]8.8e-11273.6Show/hide
Query:  MKEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQ
        MKE+LKL + GIIYPISDS WVSPIHVVPKKTG+T+VKN+  E+V  R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLAG+SYFCFLDG+S +YQ
Subjt:  MKEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQ

Query:  IHIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGI
        I +A EDQ+KTTFTC +GT+A+RRMPFGLC+APGTFQRCMMSIF D I+ CIEVF+DDFTV+GDSFD CL +L  +L+RCIE+NL LNYEKCHFMV+HGI
Subjt:  IHIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGI

Query:  VLGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF
        VLGH++SS+GIEVDK+K D+I  LPYP+ ++ +RSF+G  GFYRRFIKDF
Subjt:  VLGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF

XP_031402684.1 uncharacterized protein LOC116212259 [Punica granatum]8.8e-11273.6Show/hide
Query:  MKEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQ
        MKE+LKL + GIIYPISDS WVSPIHVVPKKTG+T+VKN+  E+V  R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLAG+SYFCFLDG+S +YQ
Subjt:  MKEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQ

Query:  IHIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGI
        I +A EDQ+KTTFTC +GT+A+RRMPFGLC+APGTFQRCMMSIF D I+ CIEVF+DDFTV+GDSFD CL +L  +L+RCIE+NL LNYEKCHFMV+HGI
Subjt:  IHIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGI

Query:  VLGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF
        VLGH++SS+GIEVDK+K D+I  LPYP+ ++ +RSF+G  GFYRRFIKDF
Subjt:  VLGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF

TrEMBL top hitse value%identityAlignment
A0A0L9TXH6 Reverse transcriptase2.1e-11172.29Show/hide
Query:  KEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQI
        KEV KL  AGIIYPISDS WVSPIHVVPKKTG+TV+KN+  E++  R+QN WR+CIDYR+LN+ T+KDHFPLPF+DQM+ERLAG+S++CFLDGFS ++QI
Subjt:  KEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQI

Query:  HIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGIV
        +I+ EDQ+KTTFTC +GT+A+RRMPFGLCNAPGTFQRCM+SIF DF++ CIEVF+DDFTVYG SFD CL SL+ +L RCI+TNL LN+EKCHFMV  G+V
Subjt:  HIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGIV

Query:  LGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF
        LGH++SSKGIEVD AK  VI +LPYP+C+++VRSF+G  GFYRRFIKDF
Subjt:  LGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF

A0A6P8D4X0 Reverse transcriptase4.2e-11273.6Show/hide
Query:  MKEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQ
        MKE+LKL + GIIYPISDS WVSPIHVVPKKTG+T+VKN+  E+V  R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLAG+SYFCFLDG+S +YQ
Subjt:  MKEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQ

Query:  IHIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGI
        I +A EDQ+KTTFTC +GT+A+RRMPFGLC+APGTFQRCMMSIF D I+ CIEVF+DDFTV+GDSFD CL +L  +L+RCIE+NL LNYEKCHFMV+HGI
Subjt:  IHIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGI

Query:  VLGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF
        VLGH++SS+GIEVDK+K D+I  LPYP+ ++ +RSF+G  GFYRRFIKDF
Subjt:  VLGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF

A0A6P8DCT8 Reverse transcriptase1.5e-11274Show/hide
Query:  MKEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQ
        MKE+LKL + GIIYPISDS WVSPIHVVPKKTG+T+VKN+  E+V  R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLAG+SYFCFLDG+S +YQ
Subjt:  MKEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQ

Query:  IHIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGI
        I +A EDQ+KTTFTC +GT+A+RRMPFGLC+APGTFQRCMMSIF D I+ CIEVF+DDFTVYGDSFD CL +L  +L+RCIE+NL LNYEKCHFMV+HGI
Subjt:  IHIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGI

Query:  VLGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF
        VLGH++SS+GIEVDK+K D+I  LPYP+ ++ +RSF+G  GFYRRFIKDF
Subjt:  VLGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF

A0A6P8DJV3 Reverse transcriptase4.2e-11273.6Show/hide
Query:  MKEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQ
        MKE+LKL + GIIYPISDS WVSPIHVVPKKTG+T+VKN+  E+V  R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLAG+SYFCFLDG+S +YQ
Subjt:  MKEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQ

Query:  IHIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGI
        I +A EDQ+KTTFTC +GT+A+RRMPFGLC+APGTFQRCMMSIF D I+ CIEVF+DDFTV+GDSFD CL +L  +L+RCIE+NL LNYEKCHFMV+HGI
Subjt:  IHIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGI

Query:  VLGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF
        VLGH++SS+GIEVDK+K D+I  LPYP+ ++ +RSF+G  GFYRRFIKDF
Subjt:  VLGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF

A0A6P8E830 Reverse transcriptase4.2e-11273.6Show/hide
Query:  MKEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQ
        MKE+LKL + GIIYPISDS WVSPIHVVPKKTG+T+VKN+  E+V  R+QNGWR+CIDYRKLN  T+KDHFPLPF+DQM+ERLAG+SYFCFLDG+S +YQ
Subjt:  MKEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQ

Query:  IHIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGI
        I +A EDQ+KTTFTC +GT+A+RRMPFGLC+APGTFQRCMMSIF D I+ CIEVF+DDFTV+GDSFD CL +L  +L+RCIE+NL LNYEKCHFMV+HGI
Subjt:  IHIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGI

Query:  VLGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF
        VLGH++SS+GIEVDK+K D+I  LPYP+ ++ +RSF+G  GFYRRFIKDF
Subjt:  VLGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.68.1e-4439.11Show/hide
Query:  EVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQIH
        ++  + N GII   S+S + SPI VVPK       K D S       +  +R+ IDYRKLNE+T  D  P+P +D+++ +L   +YF  +D    F+QI 
Subjt:  EVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQIH

Query:  IACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGIVL
        +  E   KT F+  +G Y + RMPFGL NAP TFQRCM  I    + K   V++DD  V+  S D  L SL L+  +  + NL L  +KC F+      L
Subjt:  IACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGIVL

Query:  GHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF
        GH+++  GI+ +  K + IQK P PT  K++++F+G  G+YR+FI +F
Subjt:  GHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF

P10394 Retrovirus-related Pol polyprotein from transposon 4121.3e-3637.1Show/hide
Query:  EVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQIH
        +V KL    I+ P S S + SP+ +VPKK+     K              WR+ IDYR++N+    D FPLP +D ++++L    YF  LD  S F+QI 
Subjt:  EVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQIH

Query:  IACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGIVL
        +    +  T+F+   G+Y F R+PFGL  AP +FQR M   F         +++DD  V G S    L +L  +  +C E NL L+ EKC F +     L
Subjt:  IACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGIVL

Query:  GHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF
        GH  + KGI  D  K+DVIQ  P P      R F+    +YRRFIK+F
Subjt:  GHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF

P10401 Retrovirus-related Pol polyprotein from transposon gypsy1.1e-3536.29Show/hide
Query:  EVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQIH
        EV +L   GII P S S + SP  VV KK G     N              R+ ID+RKLNE T  D +P+P +  ++  L    +F  LD  S ++QI+
Subjt:  EVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQIH

Query:  IACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGIVL
        +A  D++KT+F+ + G Y F R+PFGL NA   FQR +  +  + I K   V+VDD  ++ ++    +  ++ +L   I+ N+ ++ EK  F       L
Subjt:  IACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGIVL

Query:  GHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF
        G +VS  G + D  K   IQ+ P P C+  VRSF+G   +YR FIKDF
Subjt:  GHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF

P20825 Retrovirus-related Pol polyprotein from transposon 2971.3e-4136.69Show/hide
Query:  EVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQIH
        +V ++ N G+I   S+S + SP  VVPKK   +               N +R+ IDYRKLNE+T  D +P+P +D+++ +L    YF  +D    F+QI 
Subjt:  EVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQIH

Query:  IACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGIVL
        +  E   KT F+   G Y + RMPFGL NAP TFQRCM +I    + K   V++DD  ++  S    L S++L+  +  + NL L  +KC F+      L
Subjt:  IACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGIVL

Query:  GHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF
        GH+V+  GI+ +  K   I   P PT  K++R+F+G  G+YR+FI ++
Subjt:  GHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF

Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus4.2e-4036.14Show/hide
Query:  KEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQI
        +++ +L   GII P S+S + SPI +VPKK      K              +RM +D+++LN VT  D +P+P ++  +  L    YF  LD  S F+QI
Subjt:  KEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQI

Query:  HIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGIV
        H+   D  KT F+   G Y F R+PFGL NAP  FQR +  I  + I K   V++DD  V+ + +D    +L L+L    + NL +N EK HF+ +    
Subjt:  HIACEDQKKTTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGIV

Query:  LGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF
        LG++V++ GI+ D  K   I ++P PT +K+++ F+G   +YR+FI+D+
Subjt:  LGHLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein4.8e-0730.12Show/hide
Query:  LTSLELILNRCIETNLFLNYEKCHFMVSHGIVLG--HLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF
        +  L ++L    +   + N +KC F       LG  H++S +G+  D AK + +   P P    ++R F+G  G+YRRF+K++
Subjt:  LTSLELILNRCIETNLFLNYEKCHFMVSHGIVLG--HLVSSKGIEVDKAKFDVIQKLPYPTCLKDVRSFIGSVGFYRRFIKDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAGGTACTAAAGCTAAAAAATGCTGGAATTATCTACCCCATCTCGGATAGTACATGGGTAAGTCCAATTCATGTGGTCCCAAAGAAGACCGGGGTGACCGTTGT
AAAGAACGACACAAGTGAGATGGTTTCGATGCGAATGCAAAATGGTTGGAGAATGTGCATAGATTACCGAAAACTCAATGAGGTAACAAAAAAGGATCATTTCCCCTTAC
CATTTCTTGATCAAATGATAGAACGCTTAGCGGGTAGATCATATTTTTGTTTCTTAGATGGATTTTCTAGTTTTTACCAAATTCATATAGCATGTGAAGACCAAAAGAAA
ACAACTTTTACTTGTGATTATGGAACTTATGCATTTAGGCGTATGCCATTTGGTCTTTGTAATGCACCGGGTACATTCCAACGTTGCATGATGAGCATATTTTTCGACTT
TATTAAAAAATGCATTGAAGTTTTCGTGGATGATTTCACAGTTTATGGTGATAGTTTTGATGCATGTTTAACCAGTCTAGAATTAATTCTAAATAGATGCATAGAAACTA
ACCTTTTCTTGAATTATGAAAAGTGTCATTTCATGGTGTCTCATGGTATAGTTTTAGGACACTTAGTGTCTTCAAAAGGAATAGAGGTAGATAAAGCAAAATTTGATGTT
ATACAAAAATTGCCATATCCAACATGTTTAAAAGATGTTAGATCCTTCATTGGTAGTGTCGGCTTTTATAGACGGTTTATAAAAGATTTTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAGGTACTAAAGCTAAAAAATGCTGGAATTATCTACCCCATCTCGGATAGTACATGGGTAAGTCCAATTCATGTGGTCCCAAAGAAGACCGGGGTGACCGTTGT
AAAGAACGACACAAGTGAGATGGTTTCGATGCGAATGCAAAATGGTTGGAGAATGTGCATAGATTACCGAAAACTCAATGAGGTAACAAAAAAGGATCATTTCCCCTTAC
CATTTCTTGATCAAATGATAGAACGCTTAGCGGGTAGATCATATTTTTGTTTCTTAGATGGATTTTCTAGTTTTTACCAAATTCATATAGCATGTGAAGACCAAAAGAAA
ACAACTTTTACTTGTGATTATGGAACTTATGCATTTAGGCGTATGCCATTTGGTCTTTGTAATGCACCGGGTACATTCCAACGTTGCATGATGAGCATATTTTTCGACTT
TATTAAAAAATGCATTGAAGTTTTCGTGGATGATTTCACAGTTTATGGTGATAGTTTTGATGCATGTTTAACCAGTCTAGAATTAATTCTAAATAGATGCATAGAAACTA
ACCTTTTCTTGAATTATGAAAAGTGTCATTTCATGGTGTCTCATGGTATAGTTTTAGGACACTTAGTGTCTTCAAAAGGAATAGAGGTAGATAAAGCAAAATTTGATGTT
ATACAAAAATTGCCATATCCAACATGTTTAAAAGATGTTAGATCCTTCATTGGTAGTGTCGGCTTTTATAGACGGTTTATAAAAGATTTTTTTTAA
Protein sequenceShow/hide protein sequence
MKEVLKLKNAGIIYPISDSTWVSPIHVVPKKTGVTVVKNDTSEMVSMRMQNGWRMCIDYRKLNEVTKKDHFPLPFLDQMIERLAGRSYFCFLDGFSSFYQIHIACEDQKK
TTFTCDYGTYAFRRMPFGLCNAPGTFQRCMMSIFFDFIKKCIEVFVDDFTVYGDSFDACLTSLELILNRCIETNLFLNYEKCHFMVSHGIVLGHLVSSKGIEVDKAKFDV
IQKLPYPTCLKDVRSFIGSVGFYRRFIKDFF