| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 1.5e-107 | 81.3 | Show/hide |
Query: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLI---------------
MKDLG AQY+LGIQIVRNRKNKTLAMSQ SYIDK+LSRYKMQNS KG L +R+GIHLSKEQCPKTPQEV+DM NIPY+SAVGSL+
Subjt: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLI---------------
Query: ----YQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEA
YQSNP RDHWTAVKNILKYLRRT++YMLVYG+KDLILTGYTDSDFQ+DKDARKSTSGSVFTLNGGAVVWRS++Q+CIADSTME EYVAACEAAKEA
Subjt: ----YQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEA
Query: VWLKKFLTDLEVVPNMHLPITIYFDNSGAVANSREPRSPKRGKHIE
VWL+KFLTDLEVVPNMHLPIT+Y DNSGAVANS+EPRS KRGKHIE
Subjt: VWLKKFLTDLEVVPNMHLPITIYFDNSGAVANSREPRSPKRGKHIE
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| KAA0033336.1 gag/pol protein [Cucumis melo var. makuwa] | 7.6e-123 | 98.68 | Show/hide |
Query: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLIYQSNPERDHWTAVKN
MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYAS VGSLIYQSNP RDHWTAVKN
Subjt: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLIYQSNPERDHWTAVKN
Query: ILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEAVWLKKFLTDLEVVPNMHLP
ILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEAVWLKKFLTDLEVVPNMHLP
Subjt: ILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEAVWLKKFLTDLEVVPNMHLP
Query: ITIYFDNSGAVANSREPRSPKRGKHIE
ITIYFDNSGAVANSREPRSPKRGKHI+
Subjt: ITIYFDNSGAVANSREPRSPKRGKHIE
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| KAA0050132.1 gag/pol protein [Cucumis melo var. makuwa] | 1.3e-109 | 84.96 | Show/hide |
Query: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLI---------------
MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSY+DKMLSRYKMQN K LLSYRYGIHLSKEQCPKTPQEV+DMSNI YA AVGSL+
Subjt: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLI---------------
Query: ----YQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEA
YQSNP RDHWTA+KNILKYLRRTKDYMLVYGSKDLIL GYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSI+QSCIADSTMEVEYVAACEAAK+A
Subjt: ----YQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEA
Query: VWLKKFLTDLEVVPNMHLPITIYFDNSGAVANSREPRSPKRGKHIE
VWLKKFLTDLE VPNMHL IT+Y DNSGAVANSREPRS KRGKHIE
Subjt: VWLKKFLTDLEVVPNMHLPITIYFDNSGAVANSREPRSPKRGKHIE
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 4.8e-109 | 83.74 | Show/hide |
Query: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLIY--------------
MKDLGNAQYVLG+QIVRNRKNKTLAMSQTSYIDKMLSRYKM NS KGLL YRYGIHLSKEQCPKTPQEV+DMSNIPYASAVGSL+Y
Subjt: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLIY--------------
Query: -----QSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEA
QS P RDHWT VKNILKYLRRTKDYMLVYGSKDLILTGYTD FQTDKDARKSTSG VFT+NGGAVVWRSI+QSCIADSTME EYVA CEAAKEA
Subjt: -----QSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEA
Query: VWLKKFLTDLEVVPNMHLPITIYFDNSGAVANSREPRSPKRGKHIE
VWLKKFLTDLEVVPNMHLP T+Y DNSGAV NSREPRS KRGKHIE
Subjt: VWLKKFLTDLEVVPNMHLPITIYFDNSGAVANSREPRSPKRGKHIE
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| TYK21571.1 gag/pol protein [Cucumis melo var. makuwa] | 7.6e-123 | 98.68 | Show/hide |
Query: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLIYQSNPERDHWTAVKN
MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYAS VGSLIYQSNP RDHWTAVKN
Subjt: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLIYQSNPERDHWTAVKN
Query: ILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEAVWLKKFLTDLEVVPNMHLP
ILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEAVWLKKFLTDLEVVPNMHLP
Subjt: ILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEAVWLKKFLTDLEVVPNMHLP
Query: ITIYFDNSGAVANSREPRSPKRGKHIE
ITIYFDNSGAVANSREPRSPKRGKHI+
Subjt: ITIYFDNSGAVANSREPRSPKRGKHIE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7STL2 Gag/pol protein | 3.7e-123 | 98.68 | Show/hide |
Query: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLIYQSNPERDHWTAVKN
MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYAS VGSLIYQSNP RDHWTAVKN
Subjt: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLIYQSNPERDHWTAVKN
Query: ILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEAVWLKKFLTDLEVVPNMHLP
ILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEAVWLKKFLTDLEVVPNMHLP
Subjt: ILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEAVWLKKFLTDLEVVPNMHLP
Query: ITIYFDNSGAVANSREPRSPKRGKHIE
ITIYFDNSGAVANSREPRSPKRGKHI+
Subjt: ITIYFDNSGAVANSREPRSPKRGKHIE
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| A0A5A7U2R8 Gag/pol protein | 6.1e-110 | 84.96 | Show/hide |
Query: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLI---------------
MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSY+DKMLSRYKMQN K LLSYRYGIHLSKEQCPKTPQEV+DMSNI YA AVGSL+
Subjt: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLI---------------
Query: ----YQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEA
YQSNP RDHWTA+KNILKYLRRTKDYMLVYGSKDLIL GYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSI+QSCIADSTMEVEYVAACEAAK+A
Subjt: ----YQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEA
Query: VWLKKFLTDLEVVPNMHLPITIYFDNSGAVANSREPRSPKRGKHIE
VWLKKFLTDLE VPNMHL IT+Y DNSGAVANSREPRS KRGKHIE
Subjt: VWLKKFLTDLEVVPNMHLPITIYFDNSGAVANSREPRSPKRGKHIE
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| A0A5D3BX45 Gag/pol protein | 2.3e-109 | 83.74 | Show/hide |
Query: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLIY--------------
MKDLGNAQYVLG+QIVRNRKNKTLAMSQTSYIDKMLSRYKM NS KGLL YRYGIHLSKEQCPKTPQEV+DMSNIPYASAVGSL+Y
Subjt: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLIY--------------
Query: -----QSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEA
QS P RDHWT VKNILKYLRRTKDYMLVYGSKDLILTGYTD FQTDKDARKSTSG VFT+NGGAVVWRSI+QSCIADSTME EYVA CEAAKEA
Subjt: -----QSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEA
Query: VWLKKFLTDLEVVPNMHLPITIYFDNSGAVANSREPRSPKRGKHIE
VWLKKFLTDLEVVPNMHLP T+Y DNSGAV NSREPRS KRGKHIE
Subjt: VWLKKFLTDLEVVPNMHLPITIYFDNSGAVANSREPRSPKRGKHIE
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| A0A5D3DD25 Gag/pol protein | 3.7e-123 | 98.68 | Show/hide |
Query: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLIYQSNPERDHWTAVKN
MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYAS VGSLIYQSNP RDHWTAVKN
Subjt: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLIYQSNPERDHWTAVKN
Query: ILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEAVWLKKFLTDLEVVPNMHLP
ILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEAVWLKKFLTDLEVVPNMHLP
Subjt: ILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEAVWLKKFLTDLEVVPNMHLP
Query: ITIYFDNSGAVANSREPRSPKRGKHIE
ITIYFDNSGAVANSREPRSPKRGKHI+
Subjt: ITIYFDNSGAVANSREPRSPKRGKHIE
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| E2GK51 Gag/pol protein (Fragment) | 7.5e-108 | 81.3 | Show/hide |
Query: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLI---------------
MKDLG AQY+LGIQIVRNRKNKTLAMSQ SYIDK+LSRYKMQNS KG L +R+GIHLSKEQCPKTPQEV+DM NIPY+SAVGSL+
Subjt: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLI---------------
Query: ----YQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEA
YQSNP RDHWTAVKNILKYLRRT++YMLVYG+KDLILTGYTDSDFQ+DKDARKSTSGSVFTLNGGAVVWRS++Q+CIADSTME EYVAACEAAKEA
Subjt: ----YQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEA
Query: VWLKKFLTDLEVVPNMHLPITIYFDNSGAVANSREPRSPKRGKHIE
VWL+KFLTDLEVVPNMHLPIT+Y DNSGAVANS+EPRS KRGKHIE
Subjt: VWLKKFLTDLEVVPNMHLPITIYFDNSGAVANSREPRSPKRGKHIE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.6e-22 | 30.2 | Show/hide |
Query: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQN----SIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLI-----------
M DL ++ +GI+I + + +SQ++Y+ K+LS++ M+N S Y + S E C N P S +G L+
Subjt: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQN----SIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLI-----------
Query: --------YQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLI----LTGYTDSDFQTDKDARKSTSGSVFTL-NGGAVVWRSIQQSCIADSTMEVEYV
Y S + W +K +L+YL+ T D L++ K+L + GY DSD+ + RKST+G +F + + + W + +Q+ +A S+ E EY+
Subjt: --------YQSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLI----LTGYTDSDFQTDKDARKSTSGSVFTL-NGGAVVWRSIQQSCIADSTMEVEYV
Query: AACEAAKEAVWLKKFLTDLEVVPNMHLPITIYFDNSGAVANSREPRSPKRGKHIE
A EA +EA+WLK LT + + + PI IY DN G ++ + P KR KHI+
Subjt: AACEAAKEAVWLKKFLTDLEVVPNMHLPITIYFDNSGAVANSREPRSPKRGKHIE
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| P0CV72 Secreted RxLR effector protein 161 | 1.3e-19 | 41.35 | Show/hide |
Query: MSNIPYASAVGSLIY-------------------QSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLI-LTGYTDSDFQTDKDARKSTSGSVFTLNGGA
M N+PY SAVG+++Y S+P HW A+K +L+YL+ T+ Y L + L GY+D+D+ D ++R+STSG +F LNGG
Subjt: MSNIPYASAVGSLIY-------------------QSNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLI-LTGYTDSDFQTDKDARKSTSGSVFTLNGGA
Query: VVWRSIQQSCIADSTMEVEYVAACEAAKEAVWL
V WRS +Q +A S+ E EY+A EA +EAVWL
Subjt: VVWRSIQQSCIADSTMEVEYVAACEAAKEAVWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.0e-46 | 41.46 | Show/hide |
Query: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLIYQ-------------
MKDLG AQ +LG++IVR R ++ L +SQ YI+++L R+ M+N+ + LSK+ CP T +E +M+ +PY+SAVGSL+Y
Subjt: MKDLGNAQYVLGIQIVRNRKNKTLAMSQTSYIDKMLSRYKMQNSIKGLLSYRYGIHLSKEQCPKTPQEVKDMSNIPYASAVGSLIYQ-------------
Query: ------SNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEA
NP ++HW AVK IL+YLR T L +G D IL GYTD+D D D RKS++G +FT +GGA+ W+S Q C+A ST E EY+AA E KE
Subjt: ------SNPERDHWTAVKNILKYLRRTKDYMLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEA
Query: VWLKKFLTDLEVVPNMHLPITIYFDNSGAVANSREPRSPKRGKHIE
+WLK+FL +L + ++ +Y D+ A+ S+ R KHI+
Subjt: VWLKKFLTDLEVVPNMHLPITIYFDNSGAVANSREPRSPKRGKHIE
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.8e-13 | 33.1 | Show/hide |
Query: YQSNPERDHWTAVKNILKYLRRTKDY-MLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEAVWL
Y P DHW A+K +L+YL T D+ + + L L Y+D+D+ D D ST+G + L + W S +Q + S+ E EY + + E W+
Subjt: YQSNPERDHWTAVKNILKYLRRTKDY-MLVYGSKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIQQSCIADSTMEVEYVAACEAAKEAVWL
Query: KKFLTDLEVVPNMHLPITIYFDNSGAVANSREPRSPKRGKHI
LT+L + + P IY DN GA P R KHI
Subjt: KKFLTDLEVVPNMHLPITIYFDNSGAVANSREPRSPKRGKHI
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