; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc05g0130921 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0130921
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr05:9836779..9837816
RNA-Seq ExpressionCmc05g0130921
SyntenyCmc05g0130921
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR041588 - Integrase zinc-binding domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035204.1 reverse transcriptase [Cucumis melo var. makuwa]2.4e-18492.17Show/hide
Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRK
        MQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDC ILYHPGKANVVADAL RK
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRK

Query:  VAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLT
        VAHSAALITKQ PLLRDFER EIA+SVGEVT+QLAQLSVQPTLRQ+II AQL +PYLVEKRR+VETGQGE+FSISSDDGL FEGR CVPEDS VKTELL+
Subjt:  VAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLT

Query:  EAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH
        EAHSSPFTMH  STKMYQDLRSVYWWRNMKREVADF+SRCLVCQQVKAPRQRPAGLLQPLSVPGWKWES+SMDFI GLPKTL+GYTVIWVVVDRLTKSAH
Subjt:  EAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH

Query:  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK
        FVPGKSTY ASKWGQLYMTEIVRLHGVPVSI+SDRD RFTSKFWK
Subjt:  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK

KAA0035890.1 pol protein [Cucumis melo var. makuwa]1.4e-18492.75Show/hide
Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRK
        MQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDC ILYHPGKANVVADAL RK
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRK

Query:  VAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLT
        VAHSAALITKQ PLLRDFER EIA+SVGEVT+QLAQLSVQPTLRQ+II AQLN+PYL EKRR+VETGQGEDFSISSDDGL FEGR CVPEDSAVK ELLT
Subjt:  VAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLT

Query:  EAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH
        EAHSSPFTMH  STKMYQDLRSVYWWR MKREVADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWES+SMDFI GLPKTL+GYTVIWVVVDRLTKSAH
Subjt:  EAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH

Query:  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK
        FVPGKSTY ASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWK
Subjt:  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK

KAA0040942.1 pol protein [Cucumis melo var. makuwa]5.3e-18492.46Show/hide
Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRK
        MQQGKVVAYASRQLK HEQNYPTHDLELAAVV ALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDC ILYHPGKANVVADAL RK
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRK

Query:  VAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLT
        VAHSAALITKQ PLLRDFER EIA+SVGEVT+QLAQLSVQPTLRQ+II AQLN+PYL EKRR+VETGQGEDFSISSDDGL FEGR CVPEDSAVKTELLT
Subjt:  VAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLT

Query:  EAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH
        EAHSSPFTMH  STKMYQDLRSVYWWR MKREVADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWES+SMDFI GLPKTL+G+TVIWVVVDRLTKSAH
Subjt:  EAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH

Query:  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK
        FVPGKSTY ASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWK
Subjt:  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK

KAA0045309.1 pol protein [Cucumis melo var. makuwa]1.8e-18492.46Show/hide
Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRK
        MQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDC ILYHPGKANVVAD+L RK
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRK

Query:  VAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLT
        VAHSAALITKQ PLLRDFER EIA+SVGEVT+QLAQLSVQPTLRQ+II AQLN+PYL EKRR+VETGQGEDFSISSDDGL FEGR CVPEDSAVKTELLT
Subjt:  VAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLT

Query:  EAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH
        EAHSSPFTMH  STKMYQDLRSVYWWR MKREVADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWES+SMDFI GLPKTL+GYTVIWVVVDRLTKSAH
Subjt:  EAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH

Query:  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK
        FVPGKSTY ASKWGQLY+TEIVRLHGVPVSI+SDRDARFTSKFWK
Subjt:  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK

KAA0063098.1 pol protein [Cucumis melo var. makuwa]1.8e-18492.46Show/hide
Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRK
        MQQGKVVAYASRQLK+HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDC ILYHPGKANVVADAL RK
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRK

Query:  VAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLT
        VAHSAALITKQ PLLRDFER EI +SVGEVT+QLAQLSVQPTLRQ+II AQLN+PYL EKRR+VETGQGEDFSISSDDGL FEGR CVPEDSAVKTELLT
Subjt:  VAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLT

Query:  EAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH
        EAHSSPFTMH  STKMYQDLRSVYWWR MKREVADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWES+SMDFI GLPKT +GYTVIWVVVDRLTKSAH
Subjt:  EAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH

Query:  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK
        FVPGKSTY ASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWK
Subjt:  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK

TrEMBL top hitse value%identityAlignment
A0A5A7SVA8 Reverse transcriptase1.1e-18492.17Show/hide
Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRK
        MQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDC ILYHPGKANVVADAL RK
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRK

Query:  VAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLT
        VAHSAALITKQ PLLRDFER EIA+SVGEVT+QLAQLSVQPTLRQ+II AQL +PYLVEKRR+VETGQGE+FSISSDDGL FEGR CVPEDS VKTELL+
Subjt:  VAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLT

Query:  EAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH
        EAHSSPFTMH  STKMYQDLRSVYWWRNMKREVADF+SRCLVCQQVKAPRQRPAGLLQPLSVPGWKWES+SMDFI GLPKTL+GYTVIWVVVDRLTKSAH
Subjt:  EAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH

Query:  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK
        FVPGKSTY ASKWGQLYMTEIVRLHGVPVSI+SDRD RFTSKFWK
Subjt:  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK

A0A5A7SXW6 Reverse transcriptase6.7e-18592.75Show/hide
Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRK
        MQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDC ILYHPGKANVVADAL RK
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRK

Query:  VAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLT
        VAHSAALITKQ PLLRDFER EIA+SVGEVT+QLAQLSVQPTLRQ+II AQLN+PYL EKRR+VETGQGEDFSISSDDGL FEGR CVPEDSAVK ELLT
Subjt:  VAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLT

Query:  EAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH
        EAHSSPFTMH  STKMYQDLRSVYWWR MKREVADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWES+SMDFI GLPKTL+GYTVIWVVVDRLTKSAH
Subjt:  EAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH

Query:  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK
        FVPGKSTY ASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWK
Subjt:  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK

A0A5A7TBV4 Pol protein2.6e-18492.46Show/hide
Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRK
        MQQGKVVAYASRQLK HEQNYPTHDLELAAVV ALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDC ILYHPGKANVVADAL RK
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRK

Query:  VAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLT
        VAHSAALITKQ PLLRDFER EIA+SVGEVT+QLAQLSVQPTLRQ+II AQLN+PYL EKRR+VETGQGEDFSISSDDGL FEGR CVPEDSAVKTELLT
Subjt:  VAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLT

Query:  EAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH
        EAHSSPFTMH  STKMYQDLRSVYWWR MKREVADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWES+SMDFI GLPKTL+G+TVIWVVVDRLTKSAH
Subjt:  EAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH

Query:  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK
        FVPGKSTY ASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWK
Subjt:  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK

A0A5A7TVN9 Reverse transcriptase8.8e-18592.46Show/hide
Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRK
        MQQGKVVAYASRQLK HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDC ILYHPGKANVVAD+L RK
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRK

Query:  VAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLT
        VAHSAALITKQ PLLRDFER EIA+SVGEVT+QLAQLSVQPTLRQ+II AQLN+PYL EKRR+VETGQGEDFSISSDDGL FEGR CVPEDSAVKTELLT
Subjt:  VAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLT

Query:  EAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH
        EAHSSPFTMH  STKMYQDLRSVYWWR MKREVADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWES+SMDFI GLPKTL+GYTVIWVVVDRLTKSAH
Subjt:  EAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH

Query:  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK
        FVPGKSTY ASKWGQLY+TEIVRLHGVPVSI+SDRDARFTSKFWK
Subjt:  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK

A0A5A7V646 Reverse transcriptase8.8e-18592.46Show/hide
Query:  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRK
        MQQGKVVAYASRQLK+HEQNYPTHDLELAAVVFALKIWRHYLYGEKIQI+TDHKSLKYFFTQKELNMRQRRWLELVKDYDC ILYHPGKANVVADAL RK
Subjt:  MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRK

Query:  VAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLT
        VAHSAALITKQ PLLRDFER EI +SVGEVT+QLAQLSVQPTLRQ+II AQLN+PYL EKRR+VETGQGEDFSISSDDGL FEGR CVPEDSAVKTELLT
Subjt:  VAHSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLT

Query:  EAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH
        EAHSSPFTMH  STKMYQDLRSVYWWR MKREVADFVSRCLVCQQVKAPRQ PAGLLQPLSVPGWKWES+SMDFI GLPKT +GYTVIWVVVDRLTKSAH
Subjt:  EAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAH

Query:  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK
        FVPGKSTY ASKWGQLYMTEIVRLHGVPVSI+SDRDARFTSKFWK
Subjt:  FVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein1.6e-3729.23Show/hide
Query:  VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVA
        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++  I Y PG AN +ADAL R   
Subjt:  VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVA

Query:  HSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLV-----EKRRLVETGQGED-FSISSDDGLTFEGRFCVPEDSAVKT
            ++ +  P+ +D E   I        + + Q+S+    + +++    N+  L+     E +R+ E  Q +D   I+S D      +  +P D+ +  
Subjt:  HSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLV-----EKRRLVETGQGED-FSISSDDGLTFEGRFCVPEDSAVKT

Query:  ELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLT
         ++ + H     +H     +   +   + W+ +++++ ++V  C  CQ  K+   +P G LQP+      WESLSMDFI  LP++  GY  ++VVVDR +
Subjt:  ELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLT

Query:  KSAHFVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK
        K A  VP   +  A +  +++   ++   G P  I++D D  FTS+ WK
Subjt:  KSAHFVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK

P0CT35 Transposon Tf2-2 polyprotein1.6e-3729.23Show/hide
Query:  VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVA
        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++  I Y PG AN +ADAL R   
Subjt:  VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVA

Query:  HSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLV-----EKRRLVETGQGED-FSISSDDGLTFEGRFCVPEDSAVKT
            ++ +  P+ +D E   I        + + Q+S+    + +++    N+  L+     E +R+ E  Q +D   I+S D      +  +P D+ +  
Subjt:  HSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLV-----EKRRLVETGQGED-FSISSDDGLTFEGRFCVPEDSAVKT

Query:  ELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLT
         ++ + H     +H     +   +   + W+ +++++ ++V  C  CQ  K+   +P G LQP+      WESLSMDFI  LP++  GY  ++VVVDR +
Subjt:  ELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLT

Query:  KSAHFVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK
        K A  VP   +  A +  +++   ++   G P  I++D D  FTS+ WK
Subjt:  KSAHFVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK

P0CT36 Transposon Tf2-3 polyprotein1.6e-3729.23Show/hide
Query:  VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVA
        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++  I Y PG AN +ADAL R   
Subjt:  VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVA

Query:  HSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLV-----EKRRLVETGQGED-FSISSDDGLTFEGRFCVPEDSAVKT
            ++ +  P+ +D E   I        + + Q+S+    + +++    N+  L+     E +R+ E  Q +D   I+S D      +  +P D+ +  
Subjt:  HSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLV-----EKRRLVETGQGED-FSISSDDGLTFEGRFCVPEDSAVKT

Query:  ELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLT
         ++ + H     +H     +   +   + W+ +++++ ++V  C  CQ  K+   +P G LQP+      WESLSMDFI  LP++  GY  ++VVVDR +
Subjt:  ELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLT

Query:  KSAHFVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK
        K A  VP   +  A +  +++   ++   G P  I++D D  FTS+ WK
Subjt:  KSAHFVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK

P0CT41 Transposon Tf2-12 polyprotein1.6e-3729.23Show/hide
Query:  VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVA
        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++  I Y PG AN +ADAL R   
Subjt:  VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVA

Query:  HSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLV-----EKRRLVETGQGED-FSISSDDGLTFEGRFCVPEDSAVKT
            ++ +  P+ +D E   I        + + Q+S+    + +++    N+  L+     E +R+ E  Q +D   I+S D      +  +P D+ +  
Subjt:  HSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLV-----EKRRLVETGQGED-FSISSDDGLTFEGRFCVPEDSAVKT

Query:  ELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLT
         ++ + H     +H     +   +   + W+ +++++ ++V  C  CQ  K+   +P G LQP+      WESLSMDFI  LP++  GY  ++VVVDR +
Subjt:  ELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLT

Query:  KSAHFVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK
        K A  VP   +  A +  +++   ++   G P  I++D D  FTS+ WK
Subjt:  KSAHFVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK

Q9UR07 Transposon Tf2-11 polyprotein1.6e-3729.23Show/hide
Query:  VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVA
        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++  I Y PG AN +ADAL R   
Subjt:  VAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVA

Query:  HSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLV-----EKRRLVETGQGED-FSISSDDGLTFEGRFCVPEDSAVKT
            ++ +  P+ +D E   I        + + Q+S+    + +++    N+  L+     E +R+ E  Q +D   I+S D      +  +P D+ +  
Subjt:  HSAALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLV-----EKRRLVETGQGED-FSISSDDGLTFEGRFCVPEDSAVKT

Query:  ELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLT
         ++ + H     +H     +   +   + W+ +++++ ++V  C  CQ  K+   +P G LQP+      WESLSMDFI  LP++  GY  ++VVVDR +
Subjt:  ELLTEAHSSPFTMHSESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLT

Query:  KSAHFVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK
        K A  VP   +  A +  +++   ++   G P  I++D D  FTS+ WK
Subjt:  KSAHFVPGKSTYAASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWK

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCACGATTTAGAGCTGGCAGCAGTGGTCTTTGCACTG
AAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTTCACTGACCATAAGAGCCTGAAGTACTTCTTCACCCAAAAGGAGCTGAACATGAGGCAGAGA
AGGTGGCTTGAGTTAGTGAAAGACTATGACTGTGGGATTCTGTACCACCCAGGTAAAGCAAATGTAGTAGCTGATGCGCTTTGTAGGAAGGTTGCACATTCAGCA
GCACTGATCACCAAACAAGCCCCCTTACTCAGAGATTTTGAGAGAGTCGAGATTGCAATCTCAGTAGGAGAGGTTACCTCACAGTTGGCTCAGTTGTCAGTACAG
CCGACCCTGAGACAGAGGATTATTTTCGCTCAATTAAATAATCCTTATTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGGGCAAGGTGAGGACTTCTCCATATCC
TCTGACGATGGCCTTACGTTTGAGGGACGCTTTTGTGTGCCGGAAGACAGTGCAGTCAAGACAGAGCTTTTGACTGAGGCTCACAGTTCCCCATTTACCATGCAC
TCTGAGAGTACGAAAATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGAATATGAAGAGAGAAGTGGCAGATTTTGTCAGTAGATGTTTGGTATGCCAGCAG
GTGAAGGCACCTAGACAGCGGCCAGCCGGGTTGTTGCAACCCTTGAGTGTGCCAGGATGGAAATGGGAGAGTTTGTCGATGGACTTCATTATGGGACTGCCCAAG
ACCTTACAGGGCTATACAGTGATCTGGGTTGTTGTTGACAGGCTCACGAAGTCAGCCCACTTTGTTCCAGGAAAATCCACTTACGCTGCTAGTAAGTGGGGACAG
TTATATATGACAGAGATAGTGAGACTGCATGGAGTGCCCGTATCCATCGTTTCGGACAGAGATGCTCGTTTCACATCGAAGTTCTGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACCCACGATTTAGAGCTGGCAGCAGTGGTCTTTGCACTG
AAGATATGGAGGCACTACCTGTACGGTGAGAAGATACAGATTTTCACTGACCATAAGAGCCTGAAGTACTTCTTCACCCAAAAGGAGCTGAACATGAGGCAGAGA
AGGTGGCTTGAGTTAGTGAAAGACTATGACTGTGGGATTCTGTACCACCCAGGTAAAGCAAATGTAGTAGCTGATGCGCTTTGTAGGAAGGTTGCACATTCAGCA
GCACTGATCACCAAACAAGCCCCCTTACTCAGAGATTTTGAGAGAGTCGAGATTGCAATCTCAGTAGGAGAGGTTACCTCACAGTTGGCTCAGTTGTCAGTACAG
CCGACCCTGAGACAGAGGATTATTTTCGCTCAATTAAATAATCCTTATTTGGTCGAGAAGCGTCGTTTGGTAGAGACAGGGCAAGGTGAGGACTTCTCCATATCC
TCTGACGATGGCCTTACGTTTGAGGGACGCTTTTGTGTGCCGGAAGACAGTGCAGTCAAGACAGAGCTTTTGACTGAGGCTCACAGTTCCCCATTTACCATGCAC
TCTGAGAGTACGAAAATGTACCAGGACTTAAGGAGTGTCTATTGGTGGAGGAATATGAAGAGAGAAGTGGCAGATTTTGTCAGTAGATGTTTGGTATGCCAGCAG
GTGAAGGCACCTAGACAGCGGCCAGCCGGGTTGTTGCAACCCTTGAGTGTGCCAGGATGGAAATGGGAGAGTTTGTCGATGGACTTCATTATGGGACTGCCCAAG
ACCTTACAGGGCTATACAGTGATCTGGGTTGTTGTTGACAGGCTCACGAAGTCAGCCCACTTTGTTCCAGGAAAATCCACTTACGCTGCTAGTAAGTGGGGACAG
TTATATATGACAGAGATAGTGAGACTGCATGGAGTGCCCGTATCCATCGTTTCGGACAGAGATGCTCGTTTCACATCGAAGTTCTGGAAATGA
Protein sequenceShow/hide protein sequence
MQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCGILYHPGKANVVADALCRKVAHSA
ALITKQAPLLRDFERVEIAISVGEVTSQLAQLSVQPTLRQRIIFAQLNNPYLVEKRRLVETGQGEDFSISSDDGLTFEGRFCVPEDSAVKTELLTEAHSSPFTMH
SESTKMYQDLRSVYWWRNMKREVADFVSRCLVCQQVKAPRQRPAGLLQPLSVPGWKWESLSMDFIMGLPKTLQGYTVIWVVVDRLTKSAHFVPGKSTYAASKWGQ
LYMTEIVRLHGVPVSIVSDRDARFTSKFWK