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Cmc05g0130941 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0130941
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationCMiso1.1chr05:9861022..9861437
RNA-Seq ExpressionCmc05g0130941
SyntenyCmc05g0130941
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0032259 - methylation (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0016020 - membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004601 - peroxidase activity (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0016853 - isomerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033505.1 peroxidase 64 [Cucumis melo var. makuwa]1.9e-2386.57Show/hide
Query:  GVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEVGSSVSSLQ
        GVTVVDWKNLTFTF  SG  I IKGDPSLTK  ISLKSMYKSWSDKDEGYFIECRAI+VGSSVSS Q
Subjt:  GVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEVGSSVSSLQ

KAA0035476.1 peroxidase 64 [Cucumis melo var. makuwa]7.6e-2074.24Show/hide
Query:  MQWLHLSGVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEV
        MQWLH  GVT+VDWKNLTFTF  +G  + IKGDPSLTK  ISLKSM+K+WSD+DEGY IECRAI V
Subjt:  MQWLHLSGVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEV

KAA0047329.1 myosin-11 isoform X1 [Cucumis melo var. makuwa]9.9e-2074.24Show/hide
Query:  MQWLHLSGVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEV
        MQWLH  GVTVVDWKNLT TF   G  I +KGDPSLTKA ISLKSM+K+W D+DEGY IECRA+EV
Subjt:  MQWLHLSGVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEV

KAA0066684.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.0e-2075.76Show/hide
Query:  MQWLHLSGVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEV
        MQWLH  GVT+VDWKNLTFTFI +G  I IKGDPSLTK  IS K M+K+WSD+DEGY IECRAIEV
Subjt:  MQWLHLSGVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEV

TYK18957.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]9.9e-2072.73Show/hide
Query:  MQWLHLSGVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEV
        MQWLHL GVTVVDWKNLT TF + G  I +KGDPSLTK+ ISLKSM+K+W D+DEG+ IECRAI+V
Subjt:  MQWLHLSGVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEV

TrEMBL top hitse value%identityAlignment
A0A5A7SZV1 Peroxidase 643.7e-2074.24Show/hide
Query:  MQWLHLSGVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEV
        MQWLH  GVT+VDWKNLTFTF  +G  + IKGDPSLTK  ISLKSM+K+WSD+DEGY IECRAI V
Subjt:  MQWLHLSGVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEV

A0A5A7TY09 Ty3/gypsy retrotransposon protein4.8e-2072.73Show/hide
Query:  MQWLHLSGVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEV
        MQWLHL GVTVVDWKNLT TF + G  I +KGDPSLTK+ ISLKSM+K+W D+DEG+ IECRAI+V
Subjt:  MQWLHLSGVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEV

A0A5A7VH69 Ty3-gypsy retrotransposon protein9.6e-2175.76Show/hide
Query:  MQWLHLSGVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEV
        MQWLH  GVT+VDWKNLTFTFI +G  I IKGDPSLTK  IS K M+K+WSD+DEGY IECRAIEV
Subjt:  MQWLHLSGVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEV

A0A5D3D5W7 Ty3/gypsy retrotransposon protein4.8e-2072.73Show/hide
Query:  MQWLHLSGVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEV
        MQWLHL GVTVVDWKNLT TF + G  I +KGDPSLTK+ ISLKSM+K+W D+DEG+ IECRAI+V
Subjt:  MQWLHLSGVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEV

A0A5D3DST3 Peroxidase 649.3e-2486.57Show/hide
Query:  GVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEVGSSVSSLQ
        GVTVVDWKNLTFTF  SG  I IKGDPSLTK  ISLKSMYKSWSDKDEGYFIECRAI+VGSSVSS Q
Subjt:  GVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEVGSSVSSLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATGGTTACATTTGTCGGGGGTTACTGTTGTAGATTGGAAGAATCTTACTTTCACATTCATAAATAGCGGCATACATATCTTTATCAAAGGTGATCCTAGTCTAAC
AAAAGCCCCAATTAGCCTCAAAAGTATGTACAAATCTTGGAGTGATAAGGATGAAGGCTACTTTATTGAATGTAGAGCAATAGAAGTGGGAAGTTCAGTGAGTTCATTAC
AATGGTATTTTTTTTTTCAAAATCGAGAATGA
mRNA sequenceShow/hide mRNA sequence
GGTTATCGACCAAAGAGACAGCCCACTATGGGGTTATTCTTGGGTCCGAAACAGCTATACAAGGAAAAGGAGTGTGTGAAGCAGTGGAGATCCAATTAGCCGATTGAAAA
GTAACAGAGGACTTCCTACCTTTGGAACTAGGAGGAGTGGATGTCATATTGGGGATGCAATGGTTACATTTGTCGGGGGTTACTGTTGTAGATTGGAAGAATCTTACTTT
CACATTCATAAATAGCGGCATACATATCTTTATCAAAGGTGATCCTAGTCTAACAAAAGCCCCAATTAGCCTCAAAAGTATGTACAAATCTTGGAGTGATAAGGATGAAG
GCTACTTTATTGAATGTAGAGCAATAGAAGTGGGAAGTTCAGTGAGTTCATTACAATGGTATTTTTTTTTTCAAAATCGAGAATGA
Protein sequenceShow/hide protein sequence
MQWLHLSGVTVVDWKNLTFTFINSGIHIFIKGDPSLTKAPISLKSMYKSWSDKDEGYFIECRAIEVGSSVSSLQWYFFFQNRE