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Cmc05g0131031 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0131031
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr05:10038446..10054698
RNA-Seq ExpressionCmc05g0131031
SyntenyCmc05g0131031
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0000428 - DNA-directed RNA polymerase complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031931.1 pol protein [Cucumis melo var. makuwa]3.9e-0891.43Show/hide
Query:  KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC
        +VRAQRGAD REAGRTR+GHMDASGFLIASADVFC
Subjt:  KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC
KAA0039650.1 hypothetical protein E6C27_scaffold744G001360 [Cucumis melo var. makuwa]1.2e-0997.14Show/hide
Query:  KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC
        +VRAQRGADPREAGRTRKGHMDASGFLIASADVFC
Subjt:  KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC
KAA0062520.1 pol protein [Cucumis melo var. makuwa]3.9e-0891.43Show/hide
Query:  KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC
        +VRAQRGAD REAGRTR+GHMDASGFLIASADVFC
Subjt:  KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC
KAA0062727.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]2.3e-0857.97Show/hide
Query:  IVVQHIAYIHSSKMRKVNKMMFIVV----QHIAYIHSSKVRAQRGADPREAGRTRKGHMDASGFLIASA
        I+ +HI    S K+  VNKM + V+    Q++ Y+  +KVRAQR AD REAGRTR+GHMDASGFLIASA
Subjt:  IVVQHIAYIHSSKMRKVNKMMFIVV----QHIAYIHSSKVRAQRGADPREAGRTRKGHMDASGFLIASA
TYK22067.1 hypothetical protein E5676_scaffold318G00490 [Cucumis melo var. makuwa]3.9e-0891.43Show/hide
Query:  KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC
        +VRAQRGAD REAGRTR+GHMDASGFLIASADVFC
Subjt:  KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC
TrEMBL top hitse value%identityAlignment
A0A5A7SQU8 Reverse transcriptase1.9e-0891.43Show/hide
Query:  KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC
        +VRAQRGAD REAGRTR+GHMDASGFLIASADVFC
Subjt:  KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC
A0A5A7V0H5 Uncharacterized protein1.9e-0891.43Show/hide
Query:  KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC
        +VRAQRGAD REAGRTR+GHMDASGFLIASADVFC
Subjt:  KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC
A0A5A7V5L6 Reverse transcriptase1.9e-0891.43Show/hide
Query:  KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC
        +VRAQRGAD REAGRTR+GHMDASGFLIASADVFC
Subjt:  KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC
A0A5A7V6U1 Protein FAR1-RELATED SEQUENCE 3-like1.1e-0857.97Show/hide
Query:  IVVQHIAYIHSSKMRKVNKMMFIVV----QHIAYIHSSKVRAQRGADPREAGRTRKGHMDASGFLIASA
        I+ +HI    S K+  VNKM + V+    Q++ Y+  +KVRAQR AD REAGRTR+GHMDASGFLIASA
Subjt:  IVVQHIAYIHSSKMRKVNKMMFIVV----QHIAYIHSSKVRAQRGADPREAGRTRKGHMDASGFLIASA
A0A5D3B9C6 Uncharacterized protein5.9e-1097.14Show/hide
Query:  KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC
        +VRAQRGADPREAGRTRKGHMDASGFLIASADVFC
Subjt:  KVRAQRGADPREAGRTRKGHMDASGFLIASADVFC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGTGAAGAGATGAGAAAAGTGAACAAGATGATGTTTATAGTGGTTCAGCACATAGCCTACATCCACTCTTCAAAGATGAGAAAAGTGAACAAGATGATG
TTTATAGTGGTTCAGCACATAGCCTACATCCACTCTTCAAAGGTAAGGGCACAGCGAGGGGCAGACCCACGAGAGGCAGGAAGGACGCGTAAAGGCCATATGGAC
GCGTCTGGTTTTCTTATTGCTTCCGCTGATGTATTTTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGTGAAGAGATGAGAAAAGTGAACAAGATGATGTTTATAGTGGTTCAGCACATAGCCTACATCCACTCTTCAAAGATGAGAAAAGTGAACAAGATGATG
TTTATAGTGGTTCAGCACATAGCCTACATCCACTCTTCAAAGGTAAGGGCACAGCGAGGGGCAGACCCACGAGAGGCAGGAAGGACGCGTAAAGGCCATATGGAC
GCGTCTGGTTTTCTTATTGCTTCCGCTGATGTATTTTGTTAGAATATTTGGTTTGTGATTTTGAACTGATGACCTGAGTTTTTATTTGAAACTTTTGTGACTGTG
ATTTAAAATAGG
Protein sequenceShow/hide protein sequence
MEGEEMRKVNKMMFIVVQHIAYIHSSKMRKVNKMMFIVVQHIAYIHSSKVRAQRGADPREAGRTRKGHMDASGFLIASADVFC