; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc05g0131291 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0131291
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationCMiso1.1chr05:10359212..10360135
RNA-Seq ExpressionCmc05g0131291
SyntenyCmc05g0131291
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006952 - defense response (biological process)
GO:0007165 - signal transduction (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0043531 - ADP binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052755.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.4e-14895.36Show/hide
Query:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRD
        MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLA NDFGLLCQTKEFLSKNFEMKDM EASYVIGIEIFRD
Subjt:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRD

Query:  RTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVK
        RTHGLLGLSQ AYINKVLEKFKM+KCSSSVVPIQKGDKFSLMQCPKNELERNQMETI YASIVG+LLYAQTCTR DISF VGMLGRYQSNPGMDHWKA K
Subjt:  RTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVK

Query:  KVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEAT
        KV RYLQG KDYMLTYKRSDHLEVI YSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFV CFEAT
Subjt:  KVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEAT

KYP64910.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]6.9e-15185.95Show/hide
Query:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRD
        MVCKLK+SIYGLKQASRQWYLKFNDTI SFGFKENIVDRCIYLK+SGSKFI LVLYVDDILLA ND GLL +TK+FLS+NFEMKDMGEASYVIGIEIFRD
Subjt:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRD

Query:  RTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVK
        R+ GLLGLSQKAYINK+LE+F+MDKCS+S VPIQKGDKFSLMQCPKN+LER QME IPYASIVG+L+Y QTCTRPDISF VGMLGRYQSNP +DHWKA K
Subjt:  RTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVK

Query:  KVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWLRNFISGLGIVDSIV
        KV RYLQGTK++MLTY+RSDHLEVIGYSDSDFAGCVDTRKSTF YLF+LA GAISWKSAKQS+IAASTMEAEFVACFEA V   WLRNFIS LG+VDSI 
Subjt:  KVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWLRNFISGLGIVDSIV

Query:  KPLRIY
        KPL+IY
Subjt:  KPLRIY

RYE20331.1 hypothetical protein EOP45_11235, partial [Sphingobacteriaceae bacterium]1.1e-14589.86Show/hide
Query:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRD
        MVCKLK+SIYGLKQASRQWYLKFNDT+TSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLA ND GLL QTKEFLSKNFEMKDMGEASYVIGIEI RD
Subjt:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRD

Query:  RTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVK
        R+ G LGLSQKAYINKVLE+FKMDKCS+ +VPIQKGDKFSL QCPKNELER QME IPYASIVG+L+YAQTCTRP ISF VGMLGRYQSNPG+DHWKA K
Subjt:  RTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVK

Query:  KVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWL
        KV RYLQGTKD MLTYKRSDHLEVIGYSDSD+AGCVD+RKSTFGY+FLLAEGAISWKSAKQ++IAASTMEAEFVACFEATVHGLWL
Subjt:  KVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWL

RZC25410.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Glycine soja]6.0e-14782.68Show/hide
Query:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRD
        MVCKLK+SIYGLKQASRQWYLKFNDTI SFGFKEN VDRC+YLK+SGSK + LVLYVDDILLA ND GL  +TK+FLS NFEMKDMGEASYVIGIEIFR+
Subjt:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRD

Query:  RTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVK
        R+ GLLGLSQKAYINKVLE+F+M+KCS+S VPIQKGDKFSL QCPKN+LER QME IPYAS+VG+++YAQTCTRPDISF  GMLGRYQSNPGM+HWKA K
Subjt:  RTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVK

Query:  KVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWLRNFISGLGIVDSIV
        KV RYLQGTKD++LTYKRSDHLEVIGYSDSDFAGCVDTRKST G++FLLA GAISWKSAKQS++AASTMEA FVACFEAT+   WLRNFISGLGIVDSI 
Subjt:  KVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWLRNFISGLGIVDSIV

Query:  KPLRIY
        +PL++Y
Subjt:  KPLRIY

TYK04201.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.4e-14895.36Show/hide
Query:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRD
        MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLA NDFGLLCQTKEFLSKNFEMKDM EASYVIGIEIFRD
Subjt:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRD

Query:  RTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVK
        RTHGLLGLSQ AYINKVLEKFKM+KCSSSVVPIQKGDKFSLMQCPKNELERNQMETI YASIVG+LLYAQTCTR DISF VGMLGRYQSNPGMDHWKA K
Subjt:  RTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVK

Query:  KVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEAT
        KV RYLQG KDYMLTYKRSDHLEVI YSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFV CFEAT
Subjt:  KVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEAT

TrEMBL top hitse value%identityAlignment
A0A151TCW7 Retrovirus-related Pol polyprotein from transposon TNT 1-943.3e-15185.95Show/hide
Query:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRD
        MVCKLK+SIYGLKQASRQWYLKFNDTI SFGFKENIVDRCIYLK+SGSKFI LVLYVDDILLA ND GLL +TK+FLS+NFEMKDMGEASYVIGIEIFRD
Subjt:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRD

Query:  RTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVK
        R+ GLLGLSQKAYINK+LE+F+MDKCS+S VPIQKGDKFSLMQCPKN+LER QME IPYASIVG+L+Y QTCTRPDISF VGMLGRYQSNP +DHWKA K
Subjt:  RTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVK

Query:  KVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWLRNFISGLGIVDSIV
        KV RYLQGTK++MLTY+RSDHLEVIGYSDSDFAGCVDTRKSTF YLF+LA GAISWKSAKQS+IAASTMEAEFVACFEA V   WLRNFIS LG+VDSI 
Subjt:  KVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWLRNFISGLGIVDSIV

Query:  KPLRIY
        KPL+IY
Subjt:  KPLRIY

A0A445LQ30 Retrovirus-related Pol polyprotein from transposon TNT 1-942.9e-14782.68Show/hide
Query:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRD
        MVCKLK+SIYGLKQASRQWYLKFNDTI SFGFKEN VDRC+YLK+SGSK + LVLYVDDILLA ND GL  +TK+FLS NFEMKDMGEASYVIGIEIFR+
Subjt:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRD

Query:  RTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVK
        R+ GLLGLSQKAYINKVLE+F+M+KCS+S VPIQKGDKFSL QCPKN+LER QME IPYAS+VG+++YAQTCTRPDISF  GMLGRYQSNPGM+HWKA K
Subjt:  RTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVK

Query:  KVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWLRNFISGLGIVDSIV
        KV RYLQGTKD++LTYKRSDHLEVIGYSDSDFAGCVDTRKST G++FLLA GAISWKSAKQS++AASTMEA FVACFEAT+   WLRNFISGLGIVDSI 
Subjt:  KVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWLRNFISGLGIVDSIV

Query:  KPLRIY
        +PL++Y
Subjt:  KPLRIY

A0A4V1T029 Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment)5.5e-14689.86Show/hide
Query:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRD
        MVCKLK+SIYGLKQASRQWYLKFNDT+TSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLA ND GLL QTKEFLSKNFEMKDMGEASYVIGIEI RD
Subjt:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRD

Query:  RTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVK
        R+ G LGLSQKAYINKVLE+FKMDKCS+ +VPIQKGDKFSL QCPKNELER QME IPYASIVG+L+YAQTCTRP ISF VGMLGRYQSNPG+DHWKA K
Subjt:  RTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVK

Query:  KVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWL
        KV RYLQGTKD MLTYKRSDHLEVIGYSDSD+AGCVD+RKSTFGY+FLLAEGAISWKSAKQ++IAASTMEAEFVACFEATVHGLWL
Subjt:  KVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWL

A0A5A7UG95 Retrovirus-related Pol polyprotein from transposon TNT 1-946.9e-14995.36Show/hide
Query:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRD
        MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLA NDFGLLCQTKEFLSKNFEMKDM EASYVIGIEIFRD
Subjt:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRD

Query:  RTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVK
        RTHGLLGLSQ AYINKVLEKFKM+KCSSSVVPIQKGDKFSLMQCPKNELERNQMETI YASIVG+LLYAQTCTR DISF VGMLGRYQSNPGMDHWKA K
Subjt:  RTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVK

Query:  KVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEAT
        KV RYLQG KDYMLTYKRSDHLEVI YSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFV CFEAT
Subjt:  KVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEAT

A0A5D3BWW5 Retrovirus-related Pol polyprotein from transposon TNT 1-946.9e-14995.36Show/hide
Query:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRD
        MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLA NDFGLLCQTKEFLSKNFEMKDM EASYVIGIEIFRD
Subjt:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRD

Query:  RTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVK
        RTHGLLGLSQ AYINKVLEKFKM+KCSSSVVPIQKGDKFSLMQCPKNELERNQMETI YASIVG+LLYAQTCTR DISF VGMLGRYQSNPGMDHWKA K
Subjt:  RTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVK

Query:  KVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEAT
        KV RYLQG KDYMLTYKRSDHLEVI YSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFV CFEAT
Subjt:  KVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEAT

SwissProt top hitse value%identityAlignment
P04146 Copia protein1.4e-5337.74Show/hide
Query:  VCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISG--SKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFR
        VCKL ++IYGLKQA+R W+  F   +    F  + VDRCIY+   G  ++ I ++LYVDD+++A  D   +   K +L + F M D+ E  + IGI I  
Subjt:  VCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISG--SKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFR

Query:  DRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAV
        +     + LSQ AY+ K+L KF M+ C++   P+     + L       L  ++    P  S++G L+Y   CTRPD++  V +L RY S    + W+ +
Subjt:  DRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAV

Query:  KKVSRYLQGTKDYMLTYKRSDHLE--VIGYSDSDFAGCVDTRKSTFGYLFLLAE-GAISWKSAKQSIIAASTMEAEFVACFEATVHGLWLRNFISGLGIV
        K+V RYL+GT D  L +K++   E  +IGY DSD+AG    RKST GYLF + +   I W + +Q+ +AAS+ EAE++A FEA    LWL+  ++ + I 
Subjt:  KKVSRYLQGTKDYMLTYKRSDHLE--VIGYSDSDFAGCVDTRKSTFGYLFLLAE-GAISWKSAKQSIIAASTMEAEFVACFEATVHGLWLRNFISGLGIV

Query:  DSIVKPLRIY
          +  P++IY
Subjt:  DSIVKPLRIY

P0CV72 Secreted RxLR effector protein 1611.6e-3045.86Show/hide
Query:  METIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVKKVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGA
        M+ +PY S VG ++Y    TRPD++  VG+L ++ S+P   HW+A+K+V RYLQ T+ Y L + R+   +++GYSD+D+AG V++R+ST GYLF L  G 
Subjt:  METIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVKKVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGA

Query:  ISWKSAKQSIIAASTMEAEFVACFEATVHGLWL
        +SW+S KQ  +A S+ E E++A  EAT   +WL
Subjt:  ISWKSAKQSIIAASTMEAEFVACFEATVHGLWL

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-943.9e-7246.28Show/hide
Query:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLK-ISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFR
        MVCKL +S+YGLKQA RQWY+KF+  + S  + +   D C+Y K  S + FIIL+LYVDD+L+   D GL+ + K  LSK+F+MKD+G A  ++G++I R
Subjt:  MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLK-ISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFR

Query:  DRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAV
        +RT   L LSQ+ YI +VLE+F M        P+    K S   CP    E+  M  +PY+S VG+L+YA  CTRPDI+  VG++ R+  NPG +HW+AV
Subjt:  DRTHGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAV

Query:  KKVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWLRNFISGLGI
        K + RYL+GT    L +  SD + + GY+D+D AG +D RKS+ GYLF  + GAISW+S  Q  +A ST EAE++A  E     +WL+ F+  LG+
Subjt:  KKVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWLRNFISGLGI

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.2e-4335.08Show/hide
Query:  VCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRDR
        VCKL++++YGLKQA R WY++  + + + GF  ++ D  +++   G   + +++YVDDIL+  ND  LL  T + LS+ F +KD  E  Y +GIE  R  
Subjt:  VCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRDR

Query:  THGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVKK
        T   L LSQ+ YI  +L +  M        P+    K SL    K        +   Y  IVG+L Y    TRPDIS+ V  L ++   P  +H +A+K+
Subjt:  THGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVKK

Query:  VSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWLRNFISGLGIVDSIVK
        + RYL GT ++ +  K+ + L +  YSD+D+AG  D   ST GY+  L    ISW S KQ  +  S+ EAE+ +    +    W+ + ++ LGI   + +
Subjt:  VSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWLRNFISGLGIVDSIVK

Query:  PLRIY
        P  IY
Subjt:  PLRIY

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.8e-4335.71Show/hide
Query:  VCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRDR
        VC+L+++IYGLKQA R WY++    + + GF  +I D  +++   G   I +++YVDDIL+  ND  LL  T + LS+ F +K+  +  Y +GIE    R
Subjt:  VCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRDR

Query:  THGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVKK
            L LSQ+ Y   +L +  M        P+    K +L    K        +   Y  IVG+L Y    TRPD+S+ V  L +Y   P  DHW A+K+
Subjt:  THGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVKK

Query:  VSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWLRNFISGLGI
        V RYL GT D+ +  K+ + L +  YSD+D+AG  D   ST GY+  L    ISW S KQ  +  S+ EAE+ +    +    W+ + ++ LGI
Subjt:  VSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWLRNFISGLGI

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 88.1e-4936.3Show/hide
Query:  VCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRDR
        VC LK+SIYGLKQASRQW+LKF+ T+  FGF ++  D   +LKI+ + F+ +++YVDDI++  N+   + + K  L   F+++D+G   Y +G+EI R  
Subjt:  VCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRDR

Query:  THGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVKK
            + + Q+ Y   +L++  +  C  S VP+     FS           + ++   Y  ++G L+Y Q  TR DISF V  L ++   P + H +AV K
Subjt:  THGLLGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVKK

Query:  VSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWLRNFISGL
        +  Y++GT    L Y     +++  +SD+ F  C DTR+ST GY   L    ISWKS KQ +++ S+ EAE+ A   AT   +WL  F   L
Subjt:  VSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWLRNFISGL

ATMG00240.1 Gag-Pol-related retrotransposon family protein9.6e-1037.97Show/hide
Query:  TCTRPDISFVVGMLGRYQSNPGMDHWKAVKKVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLL
        T TRPD++F V  L ++ S       +AV KV  Y++GT    L Y  +  L++  ++DSD+A C DTR+S  G+  L+
Subjt:  TCTRPDISFVVGMLGRYQSNPGMDHWKAVKKVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLL

ATMG00810.1 DNA/RNA polymerases superfamily protein2.5e-2635.4Show/hide
Query:  LVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRDRTH-GLLGLSQKAYINKVLEKFKMDKCS--SSVVPIQKGDKFSLMQCPKNEL
        L+LYVDDILL  +   LL      LS  F MKD+G   Y +GI+I   +TH   L LSQ  Y  ++L    M  C   S+ +P++     S  + P    
Subjt:  LVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRDRTH-GLLGLSQKAYINKVLEKFKMDKCS--SSVVPIQKGDKFSLMQCPKNEL

Query:  ERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVKKVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLL
             +   + SIVG L Y  T TRPDIS+ V ++ +    P +  +  +K+V RY++GT  + L   ++  L V  + DSD+AGC  TR+ST G+   L
Subjt:  ERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVKKVSRYLQGTKDYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLL

Query:  AEGAISWKSAKQSIIAASTMEAEFVA
            ISW + +Q  ++ S+ E E+ A
Subjt:  AEGAISWKSAKQSIIAASTMEAEFVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTGTAAATTAAAGAGGTCAATATATGGACTGAAACAAGCTTCCAGACAGTGGTATCTTAAGTTTAATGATACCATCACATCTTTTGGTTTTAAAGAAAAT
ATCGTTGATCGATGTATATACCTAAAGATCAGTGGGAGTAAGTTTATAATTCTTGTTCTATATGTTGATGACATCTTGCTTGCTATAAATGACTTTGGTTTATTA
TGTCAAACCAAAGAATTTCTTTCTAAAAACTTTGAAATGAAAGATATGGGTGAGGCATCCTATGTGATTGGAATTGAAATATTCCGTGACCGAACACATGGATTG
TTAGGATTGTCTCAAAAGGCCTATATTAATAAAGTTCTAGAGAAATTTAAGATGGACAAATGCTCTTCAAGTGTAGTTCCAATTCAAAAGGGAGATAAATTTAGT
CTCATGCAATGTCCAAAAAATGAATTGGAACGAAATCAGATGGAAACTATTCCTTATGCATCTATTGTTGGAAACTTATTGTATGCACAAACTTGCACTAGACCA
GACATCAGTTTTGTTGTGGGTATGCTAGGCAGGTATCAAAGTAATCCAGGAATGGATCATTGGAAAGCTGTAAAGAAAGTTTCAAGGTATCTGCAAGGAACGAAA
GATTATATGCTTACTTACAAGAGATCTGATCATCTTGAGGTGATTGGATATTCAGATTCAGATTTTGCTGGATGTGTAGATACAAGAAAATCCACTTTTGGCTAT
TTGTTCCTGTTAGCTGAAGGAGCAATTTCATGGAAAAGTGCAAAGCAGTCTATTATCGCTGCATCCACTATGGAAGCTGAATTTGTAGCATGCTTTGAGGCTACA
GTTCATGGTTTATGGCTGCGGAACTTTATCTCAGGACTTGGAATTGTCGACAGTATTGTCAAGCCGCTGAGAATTTATTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTGTAAATTAAAGAGGTCAATATATGGACTGAAACAAGCTTCCAGACAGTGGTATCTTAAGTTTAATGATACCATCACATCTTTTGGTTTTAAAGAAAAT
ATCGTTGATCGATGTATATACCTAAAGATCAGTGGGAGTAAGTTTATAATTCTTGTTCTATATGTTGATGACATCTTGCTTGCTATAAATGACTTTGGTTTATTA
TGTCAAACCAAAGAATTTCTTTCTAAAAACTTTGAAATGAAAGATATGGGTGAGGCATCCTATGTGATTGGAATTGAAATATTCCGTGACCGAACACATGGATTG
TTAGGATTGTCTCAAAAGGCCTATATTAATAAAGTTCTAGAGAAATTTAAGATGGACAAATGCTCTTCAAGTGTAGTTCCAATTCAAAAGGGAGATAAATTTAGT
CTCATGCAATGTCCAAAAAATGAATTGGAACGAAATCAGATGGAAACTATTCCTTATGCATCTATTGTTGGAAACTTATTGTATGCACAAACTTGCACTAGACCA
GACATCAGTTTTGTTGTGGGTATGCTAGGCAGGTATCAAAGTAATCCAGGAATGGATCATTGGAAAGCTGTAAAGAAAGTTTCAAGGTATCTGCAAGGAACGAAA
GATTATATGCTTACTTACAAGAGATCTGATCATCTTGAGGTGATTGGATATTCAGATTCAGATTTTGCTGGATGTGTAGATACAAGAAAATCCACTTTTGGCTAT
TTGTTCCTGTTAGCTGAAGGAGCAATTTCATGGAAAAGTGCAAAGCAGTCTATTATCGCTGCATCCACTATGGAAGCTGAATTTGTAGCATGCTTTGAGGCTACA
GTTCATGGTTTATGGCTGCGGAACTTTATCTCAGGACTTGGAATTGTCGACAGTATTGTCAAGCCGCTGAGAATTTATTGGTGA
Protein sequenceShow/hide protein sequence
MVCKLKRSIYGLKQASRQWYLKFNDTITSFGFKENIVDRCIYLKISGSKFIILVLYVDDILLAINDFGLLCQTKEFLSKNFEMKDMGEASYVIGIEIFRDRTHGL
LGLSQKAYINKVLEKFKMDKCSSSVVPIQKGDKFSLMQCPKNELERNQMETIPYASIVGNLLYAQTCTRPDISFVVGMLGRYQSNPGMDHWKAVKKVSRYLQGTK
DYMLTYKRSDHLEVIGYSDSDFAGCVDTRKSTFGYLFLLAEGAISWKSAKQSIIAASTMEAEFVACFEATVHGLWLRNFISGLGIVDSIVKPLRIYW