CuGenDBv2

Gene ID	Cmc05g0132121
Organism	Cucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Genome location	CMiso1.1chr05:11977288..11979714
RNA-Seq Expression	Cmc05g0132121
Synteny	Cmc05g0132121
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0004190 - aspartic-type endopeptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR000477 - Reverse transcriptase domain IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR041373 - Reverse transcriptase, RNase H-like domain IPR041588 - Integrase zinc-binding domain IPR043128 - Reverse transcriptase/Diguanylate cyclase domain IPR043502 - DNA/RNA polymerase superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0031931.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.07

Show/hide

Query:  MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRP
        +SA RASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELL KGFIRP
Subjt:  MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRP

Query:  SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPA
        S+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID+LFDQLQGATVFSKIDLRS YHQLRIKDGDVPKTAFRSRYGHYEFI+MSF LTNAPA
Subjt:  SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPA

Query:  VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVC
        VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFW KQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPST+SEV 
Subjt:  VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVC

Query:  SFLGLA------------------------APFVWGKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQN
        SFLGLA                        APFVW KACEDSFQNLKQKLVTA VLTVPDGSGSFVIYSDA KKGLGCVLMQQGKVVAYASRQLKSHEQN
Subjt:  SFLGLA------------------------APFVWGKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLER
        YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVSHSAA ITRQAPLHRDLER
Subjt:  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLER

Query:  AEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDL
        AEIAVSVGAVT QLAQLTVQ TL+QRIIDAQGNDPY+VEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT+LLSEAHSSPFSMHPGSTKMYQDL
Subjt:  AEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDL

Query:  KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE
        KRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPL+IPEWKWEN+SMDFITGLPRTLRGF  IWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE
Subjt:  KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE

Query:  IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG
        IVRLHGVPVSIV DRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT+G TERLNQVLE+MLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFEALYG
Subjt:  IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG

Query:  KCCRSPVC
        KCCRSP+C
Subjt:  KCCRSPVC

KAA0037817.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

95.15

Show/hide

Query:  MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRP
        +SA RASKLLSQGTWGILASVVDT+EVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL+PGTVPISRAPYRMAPAELKELKVQLQELL KGFIRP
Subjt:  MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRP

Query:  SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPA
        S+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID+LFDQLQGATVFSKIDLRS YHQLRIKDGDVPKTAFRSRYGHYEFI+MSF LTNAPA
Subjt:  SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPA

Query:  VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVC
        VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFW KQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPST+SEV 
Subjt:  VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVC

Query:  SFLGLAAPFVWGKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG
        SFLGLA  +   KACEDSF+NLKQKLVTAPVLTVPDGSGSFVIYSDA KKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA+VFALKIWRHYLYG
Subjt:  SFLGLAAPFVWGKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG

Query:  EKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLK
        EKIQIFT HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAA ITRQA LHRDLERAEIAVSVGAVTMQLAQLT+QPTL+
Subjt:  EKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLK

Query:  QRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQ
        QR IDAQGNDPY+VEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT+LLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQ
Subjt:  QRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQ

Query:  QVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFW
        QVKAPRQKPAGLLQPL+IP+WKWENVSMDFITGLPRTLRGFT IWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV+LHGVPVSIVSDRDARFTSKFW
Subjt:  QVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFW

Query:  KGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVC
        KGLQTAMGTRLDFS AFHPQT+G TERLNQVLE+MLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVC
Subjt:  KGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVC

KAA0048687.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

93.32

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Query:  MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRP
        +SA RASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELL KGFIRP
Subjt:  MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRP

Query:  SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPA
        SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID+LFDQLQGATVFSKIDLRS YHQLRIKD DVPKTAFRSRYGHYEFI+MSF LTNAPA
Subjt:  SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPA

Query:  VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVC
        VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFW KQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPST+SEV 
Subjt:  VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVC

Query:  SFLGLA------------------------APFVWGKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQN
        SFLGLA                        APFVW KACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDA KKGLGCVLMQQGKVVAYASRQLKSHEQN
Subjt:  SFLGLA------------------------APFVWGKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLER
        YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAA ITRQAPLHRDLER
Subjt:  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLER

Query:  AEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDL
        AEIAVSVGAVTMQLAQLTVQPTL+QRIIDAQ NDPY+VEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKT+LLSEAHSSPFSMHPGSTKMY+D+
Subjt:  AEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDL

Query:  KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE
        KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFITGLPRTLRGFT IWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE
Subjt:  KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE

Query:  IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG
        IVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQT+G TERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYG
Subjt:  IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG

Query:  KCCRSPVC
        KCCRSPVC
Subjt:  KCCRSPVC

KAA0051357.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

92.82

Show/hide

Query:  MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRP
        +SA RASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELL KGFIRP
Subjt:  MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRP

Query:  SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPA
        +VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID+LFDQLQGATVFSKIDLRS Y+QLRIKD DVPKTAFRSRYGHYEFI+MSF LTNAPA
Subjt:  SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPA

Query:  VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVC
        VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFW KQVSFLGHVVSKA VSVDPAKIEAVTGWTRPST+SEV 
Subjt:  VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVC

Query:  SFLGLA------------------------APFVWGKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQN
        SFLGLA                        APFVW KACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDA KKGLGCVLMQQGKVVAYASRQLKSHEQN
Subjt:  SFLGLA------------------------APFVWGKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLER
        YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAA ITRQAPLHRDLER
Subjt:  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLER

Query:  AEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDL
        AEIAVSVGAVTMQLAQLTVQPTL+QRIIDAQ NDPY+VEKRGLAEAGQAVEFSLSSDGGL FE RLCVPSDSAVKT+LL EAHSSPFSMHPGSTKMYQDL
Subjt:  AEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDL

Query:  KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE
        KRVYWWRNMKREVAEFVS+CLVCQQVK PRQKPAGLLQPL+IPEWKWENVSMDFITGLPRTLRGFT IWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE
Subjt:  KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE

Query:  IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG
        IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ +G TERLNQVLE+MLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG
Subjt:  IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG

Query:  KCCRSPVC
        KCCRSPVC
Subjt:  KCCRSPVC

KAA0057672.1 pol protein [Cucumis melo var. makuwa]

0.0e+00

92.82

Show/hide

Query:  MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRP
        +SA RASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELL KGFIRP
Subjt:  MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRP

Query:  SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPA
        SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID+LFDQLQGATVFSKIDLRS  HQLRIKD DVPKTAFRSRYGHYEFI+MSF LTNAPA
Subjt:  SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPA

Query:  VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVC
        VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFW KQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPST+SEV 
Subjt:  VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVC

Query:  SFLGLA------------------------APFVWGKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQN
        SFLGLA                        APFVW KACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDA KKGLGCVLMQQGKVVAYASRQLKSHEQN
Subjt:  SFLGLA------------------------APFVWGKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLER
        YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAA ITRQAPLHRDLER
Subjt:  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLER

Query:  AEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDL
        AEIAVSVGAVTMQLAQLTVQPTL+QRIIDAQ NDPY+VEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT+LL+EAHSSPFSMHPGSTKMYQDL
Subjt:  AEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDL

Query:  KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE
        KR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFI GLPRTLRGFT IWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSE
Subjt:  KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE

Query:  IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG
        IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT+G TERLN+VLE+MLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY 
Subjt:  IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG

Query:  KCCRSPVC
        KCCRSP+C
Subjt:  KCCRSPVC

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SQU8 Reverse transcriptase

0.0e+00

93.07

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Query:  MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRP
        +SA RASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELL KGFIRP
Subjt:  MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRP

Query:  SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPA
        S+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID+LFDQLQGATVFSKIDLRS YHQLRIKDGDVPKTAFRSRYGHYEFI+MSF LTNAPA
Subjt:  SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPA

Query:  VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVC
        VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFW KQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPST+SEV 
Subjt:  VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVC

Query:  SFLGLA------------------------APFVWGKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQN
        SFLGLA                        APFVW KACEDSFQNLKQKLVTA VLTVPDGSGSFVIYSDA KKGLGCVLMQQGKVVAYASRQLKSHEQN
Subjt:  SFLGLA------------------------APFVWGKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLER
        YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALSRKVSHSAA ITRQAPLHRDLER
Subjt:  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLER

Query:  AEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDL
        AEIAVSVGAVT QLAQLTVQ TL+QRIIDAQGNDPY+VEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT+LLSEAHSSPFSMHPGSTKMYQDL
Subjt:  AEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDL

Query:  KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE
        KRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPL+IPEWKWEN+SMDFITGLPRTLRGF  IWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE
Subjt:  KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE

Query:  IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG
        IVRLHGVPVSIV DRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT+G TERLNQVLE+MLRACALEFPGSWDSHLHLMEFAYNNSYQATIGM PFEALYG
Subjt:  IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG

Query:  KCCRSPVC
        KCCRSP+C
Subjt:  KCCRSPVC

A0A5A7T8B6 Reverse transcriptase

0.0e+00

95.15

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Query:  MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRP
        +SA RASKLLSQGTWGILASVVDT+EVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL+PGTVPISRAPYRMAPAELKELKVQLQELL KGFIRP
Subjt:  MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRP

Query:  SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPA
        S+SPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID+LFDQLQGATVFSKIDLRS YHQLRIKDGDVPKTAFRSRYGHYEFI+MSF LTNAPA
Subjt:  SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPA

Query:  VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVC
        VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFW KQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPST+SEV 
Subjt:  VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVC

Query:  SFLGLAAPFVWGKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG
        SFLGLA  +   KACEDSF+NLKQKLVTAPVLTVPDGSGSFVIYSDA KKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAA+VFALKIWRHYLYG
Subjt:  SFLGLAAPFVWGKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG

Query:  EKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLK
        EKIQIFT HKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAA ITRQA LHRDLERAEIAVSVGAVTMQLAQLT+QPTL+
Subjt:  EKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLK

Query:  QRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQ
        QR IDAQGNDPY+VEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT+LLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQ
Subjt:  QRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQ

Query:  QVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFW
        QVKAPRQKPAGLLQPL+IP+WKWENVSMDFITGLPRTLRGFT IWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV+LHGVPVSIVSDRDARFTSKFW
Subjt:  QVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFW

Query:  KGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVC
        KGLQTAMGTRLDFS AFHPQT+G TERLNQVLE+MLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVC
Subjt:  KGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVC

A0A5A7U330 Reverse transcriptase

0.0e+00

93.32

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Query:  MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRP
        +SA RASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELL KGFIRP
Subjt:  MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRP

Query:  SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPA
        SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID+LFDQLQGATVFSKIDLRS YHQLRIKD DVPKTAFRSRYGHYEFI+MSF LTNAPA
Subjt:  SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPA

Query:  VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVC
        VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFW KQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPST+SEV 
Subjt:  VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVC

Query:  SFLGLA------------------------APFVWGKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQN
        SFLGLA                        APFVW KACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDA KKGLGCVLMQQGKVVAYASRQLKSHEQN
Subjt:  SFLGLA------------------------APFVWGKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLER
        YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAA ITRQAPLHRDLER
Subjt:  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLER

Query:  AEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDL
        AEIAVSVGAVTMQLAQLTVQPTL+QRIIDAQ NDPY+VEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDS VKT+LLSEAHSSPFSMHPGSTKMY+D+
Subjt:  AEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDL

Query:  KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE
        KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFITGLPRTLRGFT IWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE
Subjt:  KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE

Query:  IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG
        IVRLHGVPVSIVSDRDARFTSKFWK LQTAMGTRLDFSTAFHPQT+G TERLNQVLE MLRACALEFPGSWDSHLHLMEF YNNSYQATIGMAPFEALYG
Subjt:  IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG

Query:  KCCRSPVC
        KCCRSPVC
Subjt:  KCCRSPVC

A0A5A7UAA8 Reverse transcriptase

0.0e+00

92.82

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Query:  MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRP
        +SA RASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELL KGFIRP
Subjt:  MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRP

Query:  SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPA
        +VSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID+LFDQLQGATVFSKIDLRS Y+QLRIKD DVPKTAFRSRYGHYEFI+MSF LTNAPA
Subjt:  SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPA

Query:  VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVC
        VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFW KQVSFLGHVVSKA VSVDPAKIEAVTGWTRPST+SEV 
Subjt:  VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVC

Query:  SFLGLA------------------------APFVWGKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQN
        SFLGLA                        APFVW KACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDA KKGLGCVLMQQGKVVAYASRQLKSHEQN
Subjt:  SFLGLA------------------------APFVWGKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLER
        YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAA ITRQAPLHRDLER
Subjt:  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLER

Query:  AEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDL
        AEIAVSVGAVTMQLAQLTVQPTL+QRIIDAQ NDPY+VEKRGLAEAGQAVEFSLSSDGGL FE RLCVPSDSAVKT+LL EAHSSPFSMHPGSTKMYQDL
Subjt:  AEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDL

Query:  KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE
        KRVYWWRNMKREVAEFVS+CLVCQQVK PRQKPAGLLQPL+IPEWKWENVSMDFITGLPRTLRGFT IWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE
Subjt:  KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE

Query:  IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG
        IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQ +G TERLNQVLE+MLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG
Subjt:  IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG

Query:  KCCRSPVC
        KCCRSPVC
Subjt:  KCCRSPVC

A0A5A7UP94 Pol protein

0.0e+00

92.82

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Query:  MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRP
        +SA RASKLLSQGTWGILASVVDTRE DVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELL KGFIRP
Subjt:  MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRP

Query:  SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPA
        SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRID+LFDQLQGATVFSKIDLRS  HQLRIKD DVPKTAFRSRYGHYEFI+MSF LTNAPA
Subjt:  SVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPA

Query:  VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVC
        VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLR+VLQTLRDNKLYAKFSKCEFW KQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPST+SEV 
Subjt:  VFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVC

Query:  SFLGLA------------------------APFVWGKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQN
        SFLGLA                        APFVW KACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDA KKGLGCVLMQQGKVVAYASRQLKSHEQN
Subjt:  SFLGLA------------------------APFVWGKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQN

Query:  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLER
        YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAA ITRQAPLHRDLER
Subjt:  YPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLER

Query:  AEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDL
        AEIAVSVGAVTMQLAQLTVQPTL+QRIIDAQ NDPY+VEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKT+LL+EAHSSPFSMHPGSTKMYQDL
Subjt:  AEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDL

Query:  KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE
        KR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFI GLPRTLRGFT IWVVVDRLTKSAHFVPGKSTYT SKWAQLYMSE
Subjt:  KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSE

Query:  IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG
        IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQT+G TERLN+VLE+MLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY 
Subjt:  IVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALYG

Query:  KCCRSPVC
        KCCRSP+C
Subjt:  KCCRSPVC

SwissProt top hits

e value

%identity

Alignment

P0CT34 Transposon Tf2-1 polyprotein

2.0e-120

32.81

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Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNL

Query:  FDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E+++M + ++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ 
Subjt:  FDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT

Query:  LRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVCSFLG--------------LAAP----------FVWGKACEDSFQN
        L++  L    +KCEF Q QV F+G+ +S+ G +     I+ V  W +P    E+  FLG              L  P          + W      + +N
Subjt:  LRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVCSFLG--------------LAAP----------FVWGKACEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY
        +KQ LV+ PVL   D S   ++ +DA    +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L  
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY

Query:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPY
          T +    N R  RW   ++D++ EI Y PG AN +ADALSR V  +        P+ +D E   I          + Q+++    K +++    ND  
Subjt:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPY

Query:  VVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPA
        ++    L    + VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP 
Subjt:  VVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPA

Query:  GLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTR
        G LQP+   E  WE++SMDFIT LP +  G+ A++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         
Subjt:  GLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTR

Query:  LDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
        + FS  + PQT+G TER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  LDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY

P0CT35 Transposon Tf2-2 polyprotein

2.0e-120

32.81

Show/hide

Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNL

Query:  FDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E+++M + ++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ 
Subjt:  FDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT

Query:  LRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVCSFLG--------------LAAP----------FVWGKACEDSFQN
        L++  L    +KCEF Q QV F+G+ +S+ G +     I+ V  W +P    E+  FLG              L  P          + W      + +N
Subjt:  LRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVCSFLG--------------LAAP----------FVWGKACEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY
        +KQ LV+ PVL   D S   ++ +DA    +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L  
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY

Query:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPY
          T +    N R  RW   ++D++ EI Y PG AN +ADALSR V  +        P+ +D E   I          + Q+++    K +++    ND  
Subjt:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPY

Query:  VVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPA
        ++    L    + VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP 
Subjt:  VVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPA

Query:  GLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTR
        G LQP+   E  WE++SMDFIT LP +  G+ A++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         
Subjt:  GLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTR

Query:  LDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
        + FS  + PQT+G TER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  LDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY

P0CT36 Transposon Tf2-3 polyprotein

2.0e-120

32.81

Show/hide

Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNL

Query:  FDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E+++M + ++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ 
Subjt:  FDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT

Query:  LRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVCSFLG--------------LAAP----------FVWGKACEDSFQN
        L++  L    +KCEF Q QV F+G+ +S+ G +     I+ V  W +P    E+  FLG              L  P          + W      + +N
Subjt:  LRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVCSFLG--------------LAAP----------FVWGKACEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY
        +KQ LV+ PVL   D S   ++ +DA    +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L  
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY

Query:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPY
          T +    N R  RW   ++D++ EI Y PG AN +ADALSR V  +        P+ +D E   I          + Q+++    K +++    ND  
Subjt:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPY

Query:  VVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPA
        ++    L    + VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP 
Subjt:  VVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPA

Query:  GLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTR
        G LQP+   E  WE++SMDFIT LP +  G+ A++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         
Subjt:  GLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTR

Query:  LDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
        + FS  + PQT+G TER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  LDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY

P0CT37 Transposon Tf2-4 polyprotein

2.0e-120

32.81

Show/hide

Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNL

Query:  FDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E+++M + ++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ 
Subjt:  FDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT

Query:  LRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVCSFLG--------------LAAP----------FVWGKACEDSFQN
        L++  L    +KCEF Q QV F+G+ +S+ G +     I+ V  W +P    E+  FLG              L  P          + W      + +N
Subjt:  LRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVCSFLG--------------LAAP----------FVWGKACEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY
        +KQ LV+ PVL   D S   ++ +DA    +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L  
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY

Query:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPY
          T +    N R  RW   ++D++ EI Y PG AN +ADALSR V  +        P+ +D E   I          + Q+++    K +++    ND  
Subjt:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPY

Query:  VVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPA
        ++    L    + VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP 
Subjt:  VVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPA

Query:  GLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTR
        G LQP+   E  WE++SMDFIT LP +  G+ A++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         
Subjt:  GLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTR

Query:  LDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
        + FS  + PQT+G TER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  LDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY

P0CT41 Transposon Tf2-12 polyprotein

2.0e-120

32.81

Show/hide

Query:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNL
        E+LP   P + +EF +EL      +    Y + P +++ +  ++ + L  G IR S +    PV+FV KK+G++R+ +DY+ LNK    N YPLP I+ L
Subjt:  EELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNL

Query:  FDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT
          ++QG+T+F+K+DL+S YH +R++ GD  K AFR   G +E+++M + ++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H++ VLQ 
Subjt:  FDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQT

Query:  LRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVCSFLG--------------LAAP----------FVWGKACEDSFQN
        L++  L    +KCEF Q QV F+G+ +S+ G +     I+ V  W +P    E+  FLG              L  P          + W      + +N
Subjt:  LRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVCSFLG--------------LAAP----------FVWGKACEDSFQN

Query:  LKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY
        +KQ LV+ PVL   D S   ++ +DA    +G VL Q+        V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L  
Subjt:  LKQKLVTAPVLTVPDGSGSFVIYSDAFKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSLKY

Query:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPY
          T +    N R  RW   ++D++ EI Y PG AN +ADALSR V  +        P+ +D E   I          + Q+++    K +++    ND  
Subjt:  FFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAAFITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPY

Query:  VVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPA
        ++    L    + VE ++    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP 
Subjt:  VVEKRGLAEAGQAVEFSLSSDGGLLFERR--LCVPSDSAVKTKLLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPA

Query:  GLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTR
        G LQP+   E  WE++SMDFIT LP +  G+ A++VVVDR +K A  VP   + TA + A+++   ++   G P  I++D D  FTS+ WK         
Subjt:  GLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTR

Query:  LDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY
        + FS  + PQT+G TER NQ +E +LR      P +W  H+ L++ +YNN+  +   M PFE ++
Subjt:  LDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAPFEALY

Arabidopsis top hits

e value

%identity

Alignment

ATMG00860.1 DNA/RNA polymerases superfamily protein

2.5e-14

34.62

Show/hide

Query:  HLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTISEVCSFLGLAAPF-----------------------VWG
        HL +VLQ    ++ YA   KC F Q Q+++LG  H++S  GVS DPAK+EA+ GW  P   +E+  FLGL   +                        W 
Subjt:  HLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPSTISEVCSFLGLAAPF-----------------------VWG

Query:  KACEDSFQNLKQKLVTAPVLTVPDGSGSFV
        +    +F+ LK  + T PVL +PD    FV
Subjt:  KACEDSFQNLKQKLVTAPVLTVPDGSGSFV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCAGCCACCAGGGCCAGTAAACTGCTCAGTCAGGGTACTTGGGGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTCGATGTATCCCTGTCATCAGAGCCGGTGGT
GAGGGACTATCCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAGAGCCC
CTTACAGAATGGCCCCCGCAGAGCTGAAAGAACTGAAGGTGCAATTGCAAGAATTGCTTCATAAGGGATTCATTCGACCGAGCGTGTCACCTTGGGGTGCGCCAGTTTTA
TTTGTTAAGAAGAAGGATGGATCGATGCGTTTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATCGACAATCTATTTGA
CCAGTTACAGGGAGCCACAGTGTTCTCTAAGATTGATCTTCGGTCGCGATACCATCAGCTGAGGATTAAAGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGATATG
GACACTATGAGTTTATTATGATGTCATTTAGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTG
TTTATTGATGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAA
ATGCGAGTTTTGGCAGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTT
CCACAATCAGTGAGGTTTGTAGCTTTCTGGGTTTAGCAGCTCCTTTTGTTTGGGGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACTGCACCG
GTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTTCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCGTC
TCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCGGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGGTGAAAAGATAC
AGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTG
TATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCATTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGC
TGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAAACAAAGGATCATTGATGCTCAGGGTAACGATCCTTATGTGG
TTGAGAAACGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCATTATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCAGTT
AAGACAAAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAG
GGAGGTAGCAGAATTTGTGAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAAAAACCAGCGGGTTTATTACAACCCTTGAACATACCGGAATGGAAGTGGG
AAAACGTGTCAATGGATTTCATTACAGGACTGCCGAGAACTCTGAGGGGTTTTACAGCGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCCGGGT
AAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGAGGTTACACGGGGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTC
CAAATTCTGGAAGGGTTTGCAGACGGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTAACGGTCACACTGAGCGTCTGAACCAAGTTTTAGAGA
ATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGGCACCA
TTTGAGGCCTTGTACGGCAAATGTTGTAGATCCCCGGTTTGCTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSATRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPISRAPYRMAPAELKELKVQLQELLHKGFIRPSVSPWGAPVL
FVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDNLFDQLQGATVFSKIDLRSRYHQLRIKDGDVPKTAFRSRYGHYEFIMMSFSLTNAPAVFMDLMNRVFREFLDTFVIV
FIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWQKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTISEVCSFLGLAAPFVWGKACEDSFQNLKQKLVTAP
VLTVPDGSGSFVIYSDAFKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEIL
YHPGKANVVADALSRKVSHSAAFITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLKQRIIDAQGNDPYVVEKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAV
KTKLLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTAIWVVVDRLTKSAHFVPG
KSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAFHPQTNGHTERLNQVLENMLRACALEFPGSWDSHLHLMEFAYNNSYQATIGMAP
FEALYGKCCRSPVC

Cmc05g0132121 (gene) of Melon (Charmono) v1.1 genome