| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 1.6e-98 | 86.12 | Show/hide |
Query: MNDVDCDQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYE
MNDVD DQ IKAM+LEMESMY NSVW LVD PS+V+ IGCKWIYKRKRDQ GKVQTFKARLVAKGYTQ+EG+DYEETFSPVAM+KSIRILLSIATFY+YE
Subjt: MNDVDCDQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYE
Query: IWHMDVKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGND
IW MDVKTAFLNGNLEESIYMVQ EGFI + QEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSY FEQNVDEPC YK+I+NS VAFL+LY+DDILLIGND
Subjt: IWHMDVKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGND
Query: VDHLTDIKK
V++LTD+KK
Subjt: VDHLTDIKK
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| KAA0043610.1 gag/pol protein [Cucumis melo var. makuwa] | 1.2e-93 | 83.25 | Show/hide |
Query: MNDVDCDQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYE
MNDVDCDQ +KAMDL++ESMYSNSVW LVDQ ++V+ IGCKWIYKRKRDQ GKVQTFKARLV KGY ++EG++Y+ETFSPV M+KSIRILLSI TFYDYE
Subjt: MNDVDCDQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYE
Query: IWHMDVKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGND
I MDVKTAFLNGNLEESIYMVQ EGFIQKGQEQKV KLQKSIYGLKQASRSWNIRFDTAIKSY FE NVDEPC YKRII STVAFLVL +D+ILLIGND
Subjt: IWHMDVKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGND
Query: VDHLTDIKK
+ HLT+IKK
Subjt: VDHLTDIKK
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| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 6.2e-103 | 90.38 | Show/hide |
Query: NDVDCDQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYEI
NDVD DQ IKAMDL+MESMYSNSVW LVDQP+ +R IGCKWIYKRKRDQT KVQTF+ARLVAKGYTQ+EGIDYEETFSP+AMIKSIRILLSIATFYDYEI
Subjt: NDVDCDQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYEI
Query: WHMDVKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGNDV
W MDVKTAFLNGNLEESIYMVQ EGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDT IKSY FEQNVDEPC YKRIINSTVAFLVLY+DDILLIGN+V
Subjt: WHMDVKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGNDV
Query: DHLTDIKK
DHLTDIK+
Subjt: DHLTDIKK
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 4.3e-96 | 87.56 | Show/hide |
Query: MNDVDCDQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYE
MNDVD DQ IKAMDLEMESMYSNSVW LVDQP++V+ IGCKWIYKRKRDQ GKVQTFKARLVAKGYTQ+EGIDYEE FS AMIKSIRILLSIATFYDYE
Subjt: MNDVDCDQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYE
Query: IWHMDVKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGND
IW MDVKT FLN NLEESIYMVQ E FIQKGQEQK+CKLQKSIYGLKQASRS NIRFDTAIKSY EQNVDEPC YKRI+NSTVAFLVLY+DDILLIGND
Subjt: IWHMDVKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGND
Query: VDHLTDIKK
V HL DIKK
Subjt: VDHLTDIKK
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 2.6e-93 | 83.17 | Show/hide |
Query: MNDVDCDQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYE
MNDVD DQ +KAMDLEMESMY NSVW LVD P V+ IGCKWIYKRKRD GKVQTFKARLVAKGYTQ EG+DYEETFSPVAM+KSIRILLSIATFYDYE
Subjt: MNDVDCDQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYE
Query: IWHMDVKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGND
IW MDVKTAFLNGNLEESI+M Q EGFI +GQEQKVCKL +SIYGLKQASRSWNIRFDTAIKSY F+QNVDEPC YK+I VAFLVLY+DDILLIGND
Subjt: IWHMDVKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGND
Query: VDHLTDIK
V +LTD+K
Subjt: VDHLTDIK
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TK28 Gag/pol protein | 5.7e-94 | 83.25 | Show/hide |
Query: MNDVDCDQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYE
MNDVDCDQ +KAMDL++ESMYSNSVW LVDQ ++V+ IGCKWIYKRKRDQ GKVQTFKARLV KGY ++EG++Y+ETFSPV M+KSIRILLSI TFYDYE
Subjt: MNDVDCDQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYE
Query: IWHMDVKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGND
I MDVKTAFLNGNLEESIYMVQ EGFIQKGQEQKV KLQKSIYGLKQASRSWNIRFDTAIKSY FE NVDEPC YKRII STVAFLVL +D+ILLIGND
Subjt: IWHMDVKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGND
Query: VDHLTDIKK
+ HLT+IKK
Subjt: VDHLTDIKK
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| A0A5A7TTA2 Gag/pol protein | 3.0e-103 | 90.38 | Show/hide |
Query: NDVDCDQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYEI
NDVD DQ IKAMDL+MESMYSNSVW LVDQP+ +R IGCKWIYKRKRDQT KVQTF+ARLVAKGYTQ+EGIDYEETFSP+AMIKSIRILLSIATFYDYEI
Subjt: NDVDCDQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYEI
Query: WHMDVKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGNDV
W MDVKTAFLNGNLEESIYMVQ EGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDT IKSY FEQNVDEPC YKRIINSTVAFLVLY+DDILLIGN+V
Subjt: WHMDVKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGNDV
Query: DHLTDIKK
DHLTDIK+
Subjt: DHLTDIKK
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| A0A5A7TZD0 Gag/pol protein | 1.3e-93 | 83.17 | Show/hide |
Query: MNDVDCDQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYE
MNDVD DQ +KAMDLEMESMY NSVW LVD P V+ IGCKWIYKRKRD GKVQTFKARLVAKGYTQ EG+DYEETFSPVAM+KSIRILLSIATFYDYE
Subjt: MNDVDCDQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYE
Query: IWHMDVKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGND
IW MDVKTAFLNGNLEESI+M Q EGFI +GQEQKVCKL +SIYGLKQASRSWNIRFDTAIKSY F+QNVDEPC YK+I VAFLVLY+DDILLIGND
Subjt: IWHMDVKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGND
Query: VDHLTDIK
V +LTD+K
Subjt: VDHLTDIK
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| A0A5D3BX45 Gag/pol protein | 2.1e-96 | 87.56 | Show/hide |
Query: MNDVDCDQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYE
MNDVD DQ IKAMDLEMESMYSNSVW LVDQP++V+ IGCKWIYKRKRDQ GKVQTFKARLVAKGYTQ+EGIDYEE FS AMIKSIRILLSIATFYDYE
Subjt: MNDVDCDQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYE
Query: IWHMDVKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGND
IW MDVKT FLN NLEESIYMVQ E FIQKGQEQK+CKLQKSIYGLKQASRS NIRFDTAIKSY EQNVDEPC YKRI+NSTVAFLVLY+DDILLIGND
Subjt: IWHMDVKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGND
Query: VDHLTDIKK
V HL DIKK
Subjt: VDHLTDIKK
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| E2GK51 Gag/pol protein (Fragment) | 7.6e-99 | 86.12 | Show/hide |
Query: MNDVDCDQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYE
MNDVD DQ IKAM+LEMESMY NSVW LVD PS+V+ IGCKWIYKRKRDQ GKVQTFKARLVAKGYTQ+EG+DYEETFSPVAM+KSIRILLSIATFY+YE
Subjt: MNDVDCDQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYE
Query: IWHMDVKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGND
IW MDVKTAFLNGNLEESIYMVQ EGFI + QEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSY FEQNVDEPC YK+I+NS VAFL+LY+DDILLIGND
Subjt: IWHMDVKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGND
Query: VDHLTDIKK
V++LTD+KK
Subjt: VDHLTDIKK
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 1.5e-35 | 38.61 | Show/hide |
Query: KAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYEIWHMDVKTAF
+A++ E+ + N+ W + +P + +W++ K ++ G +KARLVA+G+TQ+ IDYEETF+PVA I S R +LS+ Y+ ++ MDVKTAF
Subjt: KAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYEIWHMDVKTAF
Query: LNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFY---KRIINSTVAFLVLYIDDILLIGNDVDHLTDI
LNG L+E IYM +G VCKL K+IYGLKQA+R W F+ A+K F + + C Y K IN + +++LY+DD+++ D+ + +
Subjt: LNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFY---KRIINSTVAFLVLYIDDILLIGNDVDHLTDI
Query: KK
K+
Subjt: KK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.7e-48 | 46.31 | Show/hide |
Query: DQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYEIWHMDV
+Q +KAM EMES+ N + LV+ P R + CKW++K K+D K+ +KARLV KG+ Q++GID++E FSPV + SIR +LS+A D E+ +DV
Subjt: DQRIKAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYEIWHMDV
Query: KTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPC-FYKRIINSTVAFLVLYIDDILLIGNDVDHLT
KTAFL+G+LEE IYM Q EGF G++ VCKL KS+YGLKQA R W ++FD+ +KS ++ + +PC ++KR + L+LY+DD+L++G D +
Subjt: KTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPC-FYKRIINSTVAFLVLYIDDILLIGNDVDHLT
Query: DIK
+K
Subjt: DIK
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 5.0e-15 | 45.24 | Show/hide |
Query: KAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIA
+AM E++++ N WILV P +GCKW++K K G + KARLVAKG+ QEEGI + ET+SPV +IR +L++A
Subjt: KAMDLEMESMYSNSVWILVDQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.5e-38 | 41.58 | Show/hide |
Query: AMDLEMESMYSNSVWILV-DQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYEIWHMDVKTAF
AM E+ + N W LV PS V +GC+WI+ +K + G + +KARLVAKGY Q G+DY ETFSPV SIRI+L +A + I +DV AF
Subjt: AMDLEMESMYSNSVWILV-DQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYEIWHMDVKTAF
Query: LNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGND
L G L + +YM Q GFI K + VCKL+K++YGLKQA R+W + + + F +V + + ++ ++++Y+DDIL+ GND
Subjt: LNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGND
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.2e-38 | 40 | Show/hide |
Query: DQRIKAMDLEMESMYSNSVWILV-DQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYEIWHMD
D+ +AM E+ + N W LV P V +GC+WI+ +K + G + +KARLVAKGY Q G+DY ETFSPV SIRI+L +A + I +D
Subjt: DQRIKAMDLEMESMYSNSVWILV-DQPSEVRSIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQEEGIDYEETFSPVAMIKSIRILLSIATFYDYEIWHMD
Query: VKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGND
V AFL G L + +YM Q GF+ K + VC+L+K+IYGLKQA R+W + T + + F ++ + + ++ ++++Y+DDIL+ GND
Subjt: VKTAFLNGNLEESIYMVQLEGFIQKGQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYSFEQNVDEPCFYKRIINSTVAFLVLYIDDILLIGND
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