; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cmc05g0132921 (gene) of Melon (Charmono) v1.1 genome

Gene IDCmc05g0132921
OrganismCucumis melo var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
Genome locationCMiso1.1chr05:13283391..13284284
RNA-Seq ExpressionCmc05g0132921
SyntenyCmc05g0132921
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016020 - membrane (cellular component)
GO:0043227 - membrane-bounded organelle (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR041588 - Integrase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032281.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.3e-15998.95Show/hide
Query:  RRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA
        RRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA
Subjt:  RRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA

Query:  VEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWKWEN
        VEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPG+TKMYQNLKRVYWWHNMKREVAK FSKCLVCQQVKAPRQKPAGLLQPFSIPEWKWEN
Subjt:  VEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWKWEN

Query:  VSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTR
        VSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLH AMGTR
Subjt:  VSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTR

KAA0047001.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.4e-15693.27Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLE AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA

Query:  GQAVEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWK
        GQAVEFS+SSDGGLLFERRLCVPSDSA+KTELLSEAHSSPFSMHPG+TKMYQ+LKRVYWW NMKREVA+F S+CLVCQQVKAPRQKPAGLLQP SIPEWK
Subjt:  GQAVEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWK

Query:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP
        WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV GKS YTA KWAQLYM EIVRLHG  VSIVSDRDARF SKFWKGL  AMGTRLDFST FHP
Subjt:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP

KAA0051368.1 pol protein [Cucumis melo var. makuwa]1.1e-15693.27Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLE AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA

Query:  GQAVEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWK
        GQ  EFS+SSDGGLLFERRLCVPSDSA+KTELLSEAHSSPFSMHPG+TKMYQ+LKRVYWW NMKREVA+F SKCLVCQQVKAPRQKPAGLLQP SIPEWK
Subjt:  GQAVEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWK

Query:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP
        WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV GKSTYTA KWAQLYM EIVRLHG  VSIVSDRDARF SKFWKGL  AMGTRLDFST FHP
Subjt:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP

KAA0062112.1 pol protein [Cucumis melo var. makuwa]1.4e-15692.93Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLE AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA

Query:  GQAVEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWK
        GQAVEFS+SSDGGLLFERRLCVPSDSA+KTELLSEAHSSPFSMHPG+TKMYQ+LKRVYWW NMKREVA+F S+CLVCQQVKAPRQKPAGLLQP SIPEWK
Subjt:  GQAVEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWK

Query:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP
        WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV GKSTYT+ KWAQLYM EIVRLHG  VSIVSDRDARF SKFWKGL  +MGTRLDFST FHP
Subjt:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP

TYK01613.1 pol protein [Cucumis melo var. makuwa]1.1e-15693.27Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLE AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA

Query:  GQAVEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWK
        GQ  EFS+SSDGGLLFERRLCVPSDSA+KTELLSEAHSSPFSMHPG+TKMYQ+LKRVYWW NMKREVA+F SKCLVCQQVKAPRQKPAGLLQP SIPEWK
Subjt:  GQAVEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWK

Query:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP
        WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV GKSTYTA KWAQLYM EIVRLHG  VSIVSDRDARF SKFWKGL  AMGTRLDFST FHP
Subjt:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP

TrEMBL top hitse value%identityAlignment
A0A5A7SRV6 Reverse transcriptase1.1e-15998.95Show/hide
Query:  RRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA
        RRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA
Subjt:  RRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQA

Query:  VEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWKWEN
        VEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPG+TKMYQNLKRVYWWHNMKREVAK FSKCLVCQQVKAPRQKPAGLLQPFSIPEWKWEN
Subjt:  VEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWKWEN

Query:  VSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTR
        VSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLH AMGTR
Subjt:  VSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTR

A0A5A7U077 Reverse transcriptase6.7e-15793.27Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLE AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA

Query:  GQAVEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWK
        GQAVEFS+SSDGGLLFERRLCVPSDSA+KTELLSEAHSSPFSMHPG+TKMYQ+LKRVYWW NMKREVA+F S+CLVCQQVKAPRQKPAGLLQP SIPEWK
Subjt:  GQAVEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWK

Query:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP
        WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV GKS YTA KWAQLYM EIVRLHG  VSIVSDRDARF SKFWKGL  AMGTRLDFST FHP
Subjt:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP

A0A5A7U7V9 Reverse transcriptase5.1e-15793.27Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLE AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA

Query:  GQAVEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWK
        GQ  EFS+SSDGGLLFERRLCVPSDSA+KTELLSEAHSSPFSMHPG+TKMYQ+LKRVYWW NMKREVA+F SKCLVCQQVKAPRQKPAGLLQP SIPEWK
Subjt:  GQAVEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWK

Query:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP
        WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV GKSTYTA KWAQLYM EIVRLHG  VSIVSDRDARF SKFWKGL  AMGTRLDFST FHP
Subjt:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP

A0A5A7V1N3 Reverse transcriptase6.7e-15792.93Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLE AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA

Query:  GQAVEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWK
        GQAVEFS+SSDGGLLFERRLCVPSDSA+KTELLSEAHSSPFSMHPG+TKMYQ+LKRVYWW NMKREVA+F S+CLVCQQVKAPRQKPAGLLQP SIPEWK
Subjt:  GQAVEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWK

Query:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP
        WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV GKSTYT+ KWAQLYM EIVRLHG  VSIVSDRDARF SKFWKGL  +MGTRLDFST FHP
Subjt:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP

A0A5D3BPI1 Reverse transcriptase5.1e-15793.27Show/hide
Query:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
        MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLE AEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA
Subjt:  MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEA

Query:  GQAVEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWK
        GQ  EFS+SSDGGLLFERRLCVPSDSA+KTELLSEAHSSPFSMHPG+TKMYQ+LKRVYWW NMKREVA+F SKCLVCQQVKAPRQKPAGLLQP SIPEWK
Subjt:  GQAVEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWK

Query:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP
        WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFV GKSTYTA KWAQLYM EIVRLHG  VSIVSDRDARF SKFWKGL  AMGTRLDFST FHP
Subjt:  WENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP

SwissProt top hitse value%identityAlignment
P0CT34 Transposon Tf2-1 polyprotein3.2e-3128.19Show/hide
Query:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG
        R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Subjt:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG

Query:  QAVEFSISSDGGLLFERR--LCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEW
        + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W  +++++ ++   C  CQ  K+   KP G LQP    E 
Subjt:  QAVEFSISSDGGLLFERR--LCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEW

Query:  KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP
         WE++SMDFIT LP +  G+  ++VVVDR +K A  V    + TA + A+++   ++   G    I++D D  F S+ WK         + FS  + P
Subjt:  KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP

P0CT35 Transposon Tf2-2 polyprotein3.2e-3128.19Show/hide
Query:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG
        R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Subjt:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG

Query:  QAVEFSISSDGGLLFERR--LCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEW
        + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W  +++++ ++   C  CQ  K+   KP G LQP    E 
Subjt:  QAVEFSISSDGGLLFERR--LCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEW

Query:  KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP
         WE++SMDFIT LP +  G+  ++VVVDR +K A  V    + TA + A+++   ++   G    I++D D  F S+ WK         + FS  + P
Subjt:  KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP

P0CT36 Transposon Tf2-3 polyprotein3.2e-3128.19Show/hide
Query:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG
        R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Subjt:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG

Query:  QAVEFSISSDGGLLFERR--LCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEW
        + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W  +++++ ++   C  CQ  K+   KP G LQP    E 
Subjt:  QAVEFSISSDGGLLFERR--LCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEW

Query:  KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP
         WE++SMDFIT LP +  G+  ++VVVDR +K A  V    + TA + A+++   ++   G    I++D D  F S+ WK         + FS  + P
Subjt:  KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP

P0CT41 Transposon Tf2-12 polyprotein3.2e-3128.19Show/hide
Query:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG
        R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Subjt:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG

Query:  QAVEFSISSDGGLLFERR--LCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEW
        + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W  +++++ ++   C  CQ  K+   KP G LQP    E 
Subjt:  QAVEFSISSDGGLLFERR--LCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEW

Query:  KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP
         WE++SMDFIT LP +  G+  ++VVVDR +K A  V    + TA + A+++   ++   G    I++D D  F S+ WK         + FS  + P
Subjt:  KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP

Q9UR07 Transposon Tf2-11 polyprotein3.2e-3128.19Show/hide
Query:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG
        R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I          + Q+++    + +++   +ND  L+    L    
Subjt:  RQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAG

Query:  QAVEFSISSDGGLLFERR--LCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEW
        + VE +I    GLL   +  + +P+D+ +   ++ + H     +HPG   +   + R + W  +++++ ++   C  CQ  K+   KP G LQP    E 
Subjt:  QAVEFSISSDGGLLFERR--LCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEW

Query:  KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP
         WE++SMDFIT LP +  G+  ++VVVDR +K A  V    + TA + A+++   ++   G    I++D D  F S+ WK         + FS  + P
Subjt:  KWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACA
TTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGGGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAATTAGCCCAGTTGACGGTAC
AACCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCCATATCCTCT
GATGGTGGACTTTTGTTTGAGAGGCGTCTCTGTGTGCCATCGGATAGTGCGATTAAAACAGAATTATTATCTGAGGCTCATAGTTCCCCATTTTCCATGCACCCAGGTAA
TACGAAGATGTATCAGAACCTGAAGCGGGTTTATTGGTGGCATAACATGAAGAGGGAGGTAGCAAAATTTTTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAA
GGCAGAAACCAGCGGGTTTATTACAACCCTTTAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCAAGAACTCTGAGAGGTTTTACA
GTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCGGGGTAAATCCACCTATACCGCTAGGAAGTGGGCACAGTTGTACATGTTTGAGATAGTAAG
ACTACATGGAGCGTCGGTGTCGATTGTTTCTGACAGAGATGCCCGTTTCGCATCCAAATTTTGGAAGGGTTTGCATATTGCTATGGGCACGAGGTTAGACTTTAGTACAA
CTTTCCATCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACA
TTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGGGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAATTAGCCCAGTTGACGGTAC
AACCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGCAGAGGCAGGGCAAGCGGTTGAGTTCTCCATATCCTCT
GATGGTGGACTTTTGTTTGAGAGGCGTCTCTGTGTGCCATCGGATAGTGCGATTAAAACAGAATTATTATCTGAGGCTCATAGTTCCCCATTTTCCATGCACCCAGGTAA
TACGAAGATGTATCAGAACCTGAAGCGGGTTTATTGGTGGCATAACATGAAGAGGGAGGTAGCAAAATTTTTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAA
GGCAGAAACCAGCGGGTTTATTACAACCCTTTAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCAAGAACTCTGAGAGGTTTTACA
GTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCGCACTTCGTTCGGGGTAAATCCACCTATACCGCTAGGAAGTGGGCACAGTTGTACATGTTTGAGATAGTAAG
ACTACATGGAGCGTCGGTGTCGATTGTTTCTGACAGAGATGCCCGTTTCGCATCCAAATTTTGGAAGGGTTTGCATATTGCTATGGGCACGAGGTTAGACTTTAGTACAA
CTTTCCATCCATAG
Protein sequenceShow/hide protein sequence
MRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLEGAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSISS
DGGLLFERRLCVPSDSAIKTELLSEAHSSPFSMHPGNTKMYQNLKRVYWWHNMKREVAKFFSKCLVCQQVKAPRQKPAGLLQPFSIPEWKWENVSMDFITGLPRTLRGFT
VIWVVVDRLTKSAHFVRGKSTYTARKWAQLYMFEIVRLHGASVSIVSDRDARFASKFWKGLHIAMGTRLDFSTTFHP