| GenBank top hits | e value | %identity | Alignment |
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| KAA0032697.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.6e-104 | 87.5 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
MQQG+V+AYAS Q KSHEQNYPTHDL+L AV+FALKIWRHYLYGEKIQIFTDHKSLKYFFTQ ELNMRQRRWLELVKDY+CEILYHPGKANVVAD LSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
Query: VAHSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGRLCLPEDSAVKEELLK
VAHSA LITKQAPLLRDLER EI V V +VTS+LAQLTVQPTLRQRI VAQLND YLVEKRLLVEA SEDFSISSDDGLTF+GRLC+PEDSAVKEELLK
Subjt: VAHSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGRLCLPEDSAVKEELLK
Query: EAHSSPFAMHPESTKMYQDLRCVF
EA+SSPFA+HP ST+MYQDLRCV+
Subjt: EAHSSPFAMHPESTKMYQDLRCVF
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| KAA0064132.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 6.0e-104 | 89.14 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
MQQ KVVAY SRQLKSHEQNYPTHDL+L AVVFALKIWRHYLYGEKIQIFTDH+SLKYF QKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
Query: VAHSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGRLCLPEDSAVKEELLK
VAHSAALITKQAPLLRD ER EI V V ++TS+LAQLTVQPTLRQRIIVAQLND YLVEKRLLVEAGQSEDFS+S DDGLTFDGRLC+PEDSAVK ELL
Subjt: VAHSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGRLCLPEDSAVKEELLK
Query: EAHSSPFAMHPESTKMYQDLR
EAHSSPF MHP STKMYQDLR
Subjt: EAHSSPFAMHPESTKMYQDLR
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| KAA0067363.1 pol protein [Cucumis melo var. makuwa] | 1.9e-105 | 89.73 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
MQQG+VVAYASRQLKSHEQNY THDL+L AVVF+LKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVK+YDCEILY PGKANVVA+ LSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
Query: VAHSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGRLCLPEDSAVKEELLK
VAHSAALITKQAPLLRDLER EI V + +VTS+LAQL VQPTLRQRIIVAQLND YLVEKRLLVEAGQSEDFSISSDD LTFDGRL +PEDSAVKEELLK
Subjt: VAHSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGRLCLPEDSAVKEELLK
Query: EAHSSPFAMHPESTKMYQDLRCVF
EAHSSPFAMHP STKMYQDLRCV+
Subjt: EAHSSPFAMHPESTKMYQDLRCVF
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| TYJ98730.1 pol protein [Cucumis melo var. makuwa] | 4.6e-104 | 87.5 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
MQQG+V+AYAS Q KSHEQNYPTHDL+L AV+FALKIWRHYLYGEKIQIFTDHKSLKYFFTQ ELNMRQRRWLELVKDY+CEILYHPGKANVVAD LSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
Query: VAHSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGRLCLPEDSAVKEELLK
VAHSA LITKQAPLLRDLER EI V V +VTS+LAQLTVQPTLRQRI VAQLND YLVEKRLLVEA SEDFSISSDDGLTF+GRLC+PEDSAVKEELLK
Subjt: VAHSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGRLCLPEDSAVKEELLK
Query: EAHSSPFAMHPESTKMYQDLRCVF
EA+SSPFA+HP ST+MYQDLRCV+
Subjt: EAHSSPFAMHPESTKMYQDLRCVF
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| TYK04834.1 pol protein [Cucumis melo var. makuwa] | 1.6e-104 | 88.84 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
MQQGK VAYASRQLKSHEQNY THDLKL AVVFALKIW+HYLYGEKIQIFTDHKSLKYFFTQKELNMRQ RWLELVKDYDCEILYHPGKANVV D LSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
Query: VAHSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGRLCLPEDSAVKEELLK
VAHSAALITKQAPLLRD +R +I V VE+VTS+LAQL+VQPTLRQRIIVAQLND YLVEKRLLVEAGQ EDFS SS+DGLTFDGRLC+PEDSAVK ELL
Subjt: VAHSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGRLCLPEDSAVKEELLK
Query: EAHSSPFAMHPESTKMYQDLRCVF
EAHSSPF MHPESTKMYQDLRCV+
Subjt: EAHSSPFAMHPESTKMYQDLRCVF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7STR6 Reverse transcriptase | 2.2e-104 | 87.5 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
MQQG+V+AYAS Q KSHEQNYPTHDL+L AV+FALKIWRHYLYGEKIQIFTDHKSLKYFFTQ ELNMRQRRWLELVKDY+CEILYHPGKANVVAD LSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
Query: VAHSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGRLCLPEDSAVKEELLK
VAHSA LITKQAPLLRDLER EI V V +VTS+LAQLTVQPTLRQRI VAQLND YLVEKRLLVEA SEDFSISSDDGLTF+GRLC+PEDSAVKEELLK
Subjt: VAHSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGRLCLPEDSAVKEELLK
Query: EAHSSPFAMHPESTKMYQDLRCVF
EA+SSPFA+HP ST+MYQDLRCV+
Subjt: EAHSSPFAMHPESTKMYQDLRCVF
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| A0A5A7VGY4 Pol protein | 9.0e-106 | 89.73 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
MQQG+VVAYASRQLKSHEQNY THDL+L AVVF+LKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVK+YDCEILY PGKANVVA+ LSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
Query: VAHSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGRLCLPEDSAVKEELLK
VAHSAALITKQAPLLRDLER EI V + +VTS+LAQL VQPTLRQRIIVAQLND YLVEKRLLVEAGQSEDFSISSDD LTFDGRL +PEDSAVKEELLK
Subjt: VAHSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGRLCLPEDSAVKEELLK
Query: EAHSSPFAMHPESTKMYQDLRCVF
EAHSSPFAMHP STKMYQDLRCV+
Subjt: EAHSSPFAMHPESTKMYQDLRCVF
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| A0A5D3BG22 Pol protein | 2.2e-104 | 87.5 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
MQQG+V+AYAS Q KSHEQNYPTHDL+L AV+FALKIWRHYLYGEKIQIFTDHKSLKYFFTQ ELNMRQRRWLELVKDY+CEILYHPGKANVVAD LSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
Query: VAHSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGRLCLPEDSAVKEELLK
VAHSA LITKQAPLLRDLER EI V V +VTS+LAQLTVQPTLRQRI VAQLND YLVEKRLLVEA SEDFSISSDDGLTF+GRLC+PEDSAVKEELLK
Subjt: VAHSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGRLCLPEDSAVKEELLK
Query: EAHSSPFAMHPESTKMYQDLRCVF
EA+SSPFA+HP ST+MYQDLRCV+
Subjt: EAHSSPFAMHPESTKMYQDLRCVF
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| A0A5D3C0Q2 Pol protein | 7.6e-105 | 88.84 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
MQQGK VAYASRQLKSHEQNY THDLKL AVVFALKIW+HYLYGEKIQIFTDHKSLKYFFTQKELNMRQ RWLELVKDYDCEILYHPGKANVV D LSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
Query: VAHSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGRLCLPEDSAVKEELLK
VAHSAALITKQAPLLRD +R +I V VE+VTS+LAQL+VQPTLRQRIIVAQLND YLVEKRLLVEAGQ EDFS SS+DGLTFDGRLC+PEDSAVK ELL
Subjt: VAHSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGRLCLPEDSAVKEELLK
Query: EAHSSPFAMHPESTKMYQDLRCVF
EAHSSPF MHPESTKMYQDLRCV+
Subjt: EAHSSPFAMHPESTKMYQDLRCVF
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| A0A5D3DYS8 Reverse transcriptase | 2.9e-104 | 89.14 | Show/hide |
Query: MQQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
MQQ KVVAY SRQLKSHEQNYPTHDL+L AVVFALKIWRHYLYGEKIQIFTDH+SLKYF QKELNMRQRRWLELVKDYDCEILYHPGKANVVAD LSRK
Subjt: MQQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
Query: VAHSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGRLCLPEDSAVKEELLK
VAHSAALITKQAPLLRD ER EI V V ++TS+LAQLTVQPTLRQRIIVAQLND YLVEKRLLVEAGQSEDFS+S DDGLTFDGRLC+PEDSAVK ELL
Subjt: VAHSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGRLCLPEDSAVKEELLK
Query: EAHSSPFAMHPESTKMYQDLR
EAHSSPF MHP STKMYQDLR
Subjt: EAHSSPFAMHPESTKMYQDLR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 1.9e-15 | 41.84 | Show/hide |
Query: QQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSR
Q G ++Y SR L HE NY T + +L A+V+A K +RHYL G +I +DH+ L + + K+ N + RW + ++D +I Y GK N VAD LSR
Subjt: QQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSR
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| P0CT41 Transposon Tf2-12 polyprotein | 9.2e-15 | 27.96 | Show/hide |
Query: VAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVA
V Y S ++ + NY D ++ A++ +LK WRHYL E +I TDH++L T + N R RW ++D++ EI Y PG AN +AD LSR
Subjt: VAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVA
Query: HSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGR--LCLPEDSAVKEELLK
++ + P+ +D E I + Q+++ + +++ ND L+ LL + + +I DGL + + + LP D+ + ++K
Subjt: HSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGR--LCLPEDSAVKEELLK
Query: EAHSSPFAMHP
+ H +HP
Subjt: EAHSSPFAMHP
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| P10401 Retrovirus-related Pol polyprotein from transposon gypsy | 2.4e-15 | 40 | Show/hide |
Query: QQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEK-IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
Q+G+ + SR LK EQNY T++ +L A+V+AL +++LYG + I IFTDH+ L + + N + +RW + ++ ++ Y PGK N VAD LSR+
Subjt: QQGKVVAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGEK-IQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRK
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| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 1.7e-16 | 41.49 | Show/hide |
Query: VAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGE-KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSR
+AY SR L E+NY T + ++ A++++L R YLYG I+++TDH+ L + + N + +RW +++Y+CE++Y PGK+NVVAD LSR
Subjt: VAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYGE-KIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADVLSR
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| Q9UR07 Transposon Tf2-11 polyprotein | 9.2e-15 | 27.96 | Show/hide |
Query: VAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVA
V Y S ++ + NY D ++ A++ +LK WRHYL E +I TDH++L T + N R RW ++D++ EI Y PG AN +AD LSR
Subjt: VAYASRQLKSHEQNYPTHDLKLTAVVFALKIWRHYLYG--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADVLSRKVA
Query: HSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGR--LCLPEDSAVKEELLK
++ + P+ +D E I + Q+++ + +++ ND L+ LL + + +I DGL + + + LP D+ + ++K
Subjt: HSAALITKQAPLLRDLERVEITVLVEKVTSRLAQLTVQPTLRQRIIVAQLNDLYLVEKRLLVEAGQSEDFSISSDDGLTFDGR--LCLPEDSAVKEELLK
Query: EAHSSPFAMHP
+ H +HP
Subjt: EAHSSPFAMHP
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