| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 2.1e-71 | 86.62 | Show/hide |
Query: DDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSI
DDG+EDPLT+KQAMNDVD DQ IKAM+LEMESMY NSVWTLVD P+D+KPIGCKWIYKRKRDQ GKVQTFKARLVAKGYTQKEG+DYE TFSPVAM+KSI
Subjt: DDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSI
Query: RILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKVCELQKSIY
RILLSIATFY+YEI +MDVKT FLNGNLEESIYMVQPEGFI + QEQKVC+LQKSIY
Subjt: RILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKVCELQKSIY
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| KAA0032291.1 gag/pol protein [Cucumis melo var. makuwa] | 9.9e-69 | 89.86 | Show/hide |
Query: DDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSI
DDGIEDPLT+KQAMNDVDCDQ IKAMDLEMESMY+NSVW LVDQP++++ IGCKWIYKRKRDQTGKVQTFKARLVAKGYTQ+EGIDYE TFSPVAMIKSI
Subjt: DDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSI
Query: RILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQK
RILLSIATFYDYEI MDVKT FLNGNLEESIYMVQ EGFIQKGQEQK
Subjt: RILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQK
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| KAA0045356.1 gag/pol protein [Cucumis melo var. makuwa] | 3.9e-73 | 89.17 | Show/hide |
Query: DDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSI
+D IEDPLTFKQA NDVD DQ IKAMDL+MESMY+NSVWTLVDQPN+I+PIGCKWIYKRKRDQT KVQTF+ARLVAKGYTQKEGIDYE TFSP+AMIKSI
Subjt: DDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSI
Query: RILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKVCELQKSIY
RILLSIATFYDYEI +MDVKT FLNGNLEESIYMVQPEGFIQKGQEQKVC+LQKSIY
Subjt: RILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKVCELQKSIY
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| KAA0051500.1 gag/pol protein [Cucumis melo var. makuwa] | 3.4e-69 | 87.92 | Show/hide |
Query: DDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSI
+DGIEDPLT+KQ MNDVDCDQ IK MDLEMESMY+NSVWTLVDQPN++KPI CKW+YKRKRDQ GKVQTF+ARLVAKGYTQKEGIDYE TFSPVAMIKSI
Subjt: DDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSI
Query: RILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKV
RI+LSIATFYDYEI MDVKT FLNGNL+ESIYMVQPEGFIQKGQEQKV
Subjt: RILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKV
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| TYK03644.1 gag/pol protein [Cucumis melo var. makuwa] | 4.7e-71 | 88.54 | Show/hide |
Query: DDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSI
DDGIEDPLT+K AMNDVD DQ IKAMDLEMESMY+NSVWTLVDQPND+KPIGCKWIYKRKRDQ GKVQTFKARLVAKGYTQKEGIDYE FS AMIKSI
Subjt: DDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSI
Query: RILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKVCELQKSIY
RILLSIATFYDYEI +MDVKT FLN NLEESIYMVQPE FIQKGQEQK+C+LQKSIY
Subjt: RILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKVCELQKSIY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SRW5 Gag/pol protein | 4.8e-69 | 89.86 | Show/hide |
Query: DDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSI
DDGIEDPLT+KQAMNDVDCDQ IKAMDLEMESMY+NSVW LVDQP++++ IGCKWIYKRKRDQTGKVQTFKARLVAKGYTQ+EGIDYE TFSPVAMIKSI
Subjt: DDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSI
Query: RILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQK
RILLSIATFYDYEI MDVKT FLNGNLEESIYMVQ EGFIQKGQEQK
Subjt: RILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQK
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| A0A5A7TTA2 Gag/pol protein | 1.9e-73 | 89.17 | Show/hide |
Query: DDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSI
+D IEDPLTFKQA NDVD DQ IKAMDL+MESMY+NSVWTLVDQPN+I+PIGCKWIYKRKRDQT KVQTF+ARLVAKGYTQKEGIDYE TFSP+AMIKSI
Subjt: DDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSI
Query: RILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKVCELQKSIY
RILLSIATFYDYEI +MDVKT FLNGNLEESIYMVQPEGFIQKGQEQKVC+LQKSIY
Subjt: RILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKVCELQKSIY
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| A0A5A7U8L5 Gag/pol protein | 1.6e-69 | 87.92 | Show/hide |
Query: DDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSI
+DGIEDPLT+KQ MNDVDCDQ IK MDLEMESMY+NSVWTLVDQPN++KPI CKW+YKRKRDQ GKVQTF+ARLVAKGYTQKEGIDYE TFSPVAMIKSI
Subjt: DDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSI
Query: RILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKV
RI+LSIATFYDYEI MDVKT FLNGNL+ESIYMVQPEGFIQKGQEQKV
Subjt: RILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKV
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| A0A5D3BX45 Gag/pol protein | 2.3e-71 | 88.54 | Show/hide |
Query: DDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSI
DDGIEDPLT+K AMNDVD DQ IKAMDLEMESMY+NSVWTLVDQPND+KPIGCKWIYKRKRDQ GKVQTFKARLVAKGYTQKEGIDYE FS AMIKSI
Subjt: DDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSI
Query: RILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKVCELQKSIY
RILLSIATFYDYEI +MDVKT FLN NLEESIYMVQPE FIQKGQEQK+C+LQKSIY
Subjt: RILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKVCELQKSIY
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| E2GK51 Gag/pol protein (Fragment) | 1.0e-71 | 86.62 | Show/hide |
Query: DDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSI
DDG+EDPLT+KQAMNDVD DQ IKAM+LEMESMY NSVWTLVD P+D+KPIGCKWIYKRKRDQ GKVQTFKARLVAKGYTQKEG+DYE TFSPVAM+KSI
Subjt: DDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSI
Query: RILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKVCELQKSIY
RILLSIATFY+YEI +MDVKT FLNGNLEESIYMVQPEGFI + QEQKVC+LQKSIY
Subjt: RILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKVCELQKSIY
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 5.3e-25 | 39.07 | Show/hide |
Query: PLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSIRILLSI
P +F + D +A++ E+ + N+ WT+ +P + + +W++ K ++ G +KARLVA+G+TQK IDYE TF+PVA I S R +LS+
Subjt: PLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSIRILLSI
Query: ATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKVCELQKSIY
Y+ ++ +MDVKT FLNG L+E IYM P+G VC+L K+IY
Subjt: ATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKVCELQKSIY
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.7e-36 | 47.17 | Show/hide |
Query: MSDDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIK
+SDD +P + K+ ++ + +QL+KAM EMES+ N + LV+ P +P+ CKW++K K+D K+ +KARLV KG+ QK+GID++ FSPV +
Subjt: MSDDGIEDPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIK
Query: SIRILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKVCELQKSIY
SIR +LS+A D E+ ++DVKT FL+G+LEE IYM QPEGF G++ VC+L KS+Y
Subjt: SIRILLSIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKVCELQKSIY
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 4.7e-13 | 41.67 | Show/hide |
Query: KAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSIRILLSIA
+AM E++++ N W LV P + +GCKW++K K G + KARLVAKG+ Q+EGI + T+SPV +IR +L++A
Subjt: KAMDLEMESMYANSVWTLVDQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSIRILLSIA
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.5e-27 | 41.18 | Show/hide |
Query: DPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLV-DQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSIRILL
+P T QA+ D ++ AM E+ + N W LV P+ + +GC+WI+ +K + G + +KARLVAKGY Q+ G+DY TFSPV SIRI+L
Subjt: DPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLV-DQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSIRILL
Query: SIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKVCELQKSIY
+A + I ++DV FL G L + +YM QP GFI K + VC+L+K++Y
Subjt: SIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKVCELQKSIY
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 4.0e-28 | 42.48 | Show/hide |
Query: DPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLV-DQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSIRILL
+P T QAM D D+ +AM E+ + N W LV P + +GC+WI+ +K + G + +KARLVAKGY Q+ G+DY TFSPV SIRI+L
Subjt: DPLTFKQAMNDVDCDQLIKAMDLEMESMYANSVWTLV-DQPNDIKPIGCKWIYKRKRDQTGKVQTFKARLVAKGYTQKEGIDYEATFSPVAMIKSIRILL
Query: SIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKVCELQKSIY
+A + I ++DV FL G L + +YM QP GF+ K + VC L+K+IY
Subjt: SIATFYDYEILKMDVKTVFLNGNLEESIYMVQPEGFIQKGQEQKVCELQKSIY
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