| GenBank top hits | e value | %identity | Alignment |
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| KAA0037542.1 gag/pol protein [Cucumis melo var. makuwa] | 2.3e-95 | 79.2 | Show/hide |
Query: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
MRKI YA AVGS MYAMLC RPDIC+SVGMVSRYQSN GRDHWT VKNILKYLRRTK Y+LV+ TK LIL GYTD DFQ DKD RKSTSGS+ LNGGA+
Subjt: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
Query: VWRSVKQTCIADSTMEAEYVAACE----AVWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQN
VWRSVK+TCI DSTME EYVAACE A+WLRKFLTDLEIVP MHL ITLYCDN+G +AN +E RSHKRGKHIERKY+LIRKIVHRGDVVVTQISF+QN
Subjt: VWRSVKQTCIADSTMEAEYVAACE----AVWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQN
Query: IANPFTKALMAKVFEGHLENLGLQCL
IA+PFT +L KVFE HL+NL L+CL
Subjt: IANPFTKALMAKVFEGHLENLGLQCL
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| KAA0051436.1 gag/pol protein [Cucumis melo var. makuwa] | 5.2e-116 | 93.69 | Show/hide |
Query: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWT+VKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQ DKDTRKSTSGS+F LNGGAV
Subjt: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
Query: VWRSVKQTCIADSTMEAEYVAACEAVWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQNIANP
VWRSVKQTCI +ST+EAEYVAACEAVWLRKFLT LEIVP MHLPITLYCDNSG IANLRELRSHKRGKHIERKY+LIRKIVHRGD+VVTQISFKQNIANP
Subjt: VWRSVKQTCIADSTMEAEYVAACEAVWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQNIANP
Query: FTKALMAKVFEGHLENLGLQCL
FTKALMAKVFEGHL+NLGL+CL
Subjt: FTKALMAKVFEGHLENLGLQCL
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| KAA0067959.1 gag/pol protein [Cucumis melo var. makuwa] | 3.6e-101 | 83.63 | Show/hide |
Query: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
MRKI YASAVGS MYAMLC RPDIC+SVG+VSRYQSNPGRDHWT VKNILKYLRRTKDYMLV+ TK LILTGYTDSDFQMDKD RKSTSGSVF LNGGAV
Subjt: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
Query: VWRSVKQTCIADSTMEAEYVAACEA----VWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQN
VWRS+KQ+CI D+TMEAE+VAA EA VWLRKFLTDLE VP MHLPIT YCDNSG +AN RE R+HKRGKHIERKY+LIRKIVHRGDVVVTQIS KQN
Subjt: VWRSVKQTCIADSTMEAEYVAACEA----VWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQN
Query: IANPFTKALMAKVFEGHLENLGLQCL
IA+PFTKAL AKVFE HL++LGL+CL
Subjt: IANPFTKALMAKVFEGHLENLGLQCL
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| TYK21785.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-100 | 82.74 | Show/hide |
Query: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
MRKI YAS VGS MYAMLC RPDIC+SVG+VSRYQSNPGRDHWT VKNILKYLRRTKDYMLV+ TK LILTGYTDSDFQMDKD RKSTSGS+F LNGGAV
Subjt: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
Query: VWRSVKQTCIADSTMEAEYVAACEA----VWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQN
VWRS+KQ+CI D+TMEAE+VAA EA VWLRKFLTDLE VP MHLPIT YCDNSG +AN RE R+HKRGKHIERKY+LIRKIVHRGDVVVTQIS KQN
Subjt: VWRSVKQTCIADSTMEAEYVAACEA----VWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQN
Query: IANPFTKALMAKVFEGHLENLGLQCL
IA+PFTKAL AKVFE HL++LGL+CL
Subjt: IANPFTKALMAKVFEGHLENLGLQCL
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| TYK27801.1 gag/pol protein [Cucumis melo var. makuwa] | 1.7e-95 | 80.56 | Show/hide |
Query: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
MRKI YASAVGS MYAMLC RPDIC+SVGM+SRYQSNPGRDHWT VKNILKYL+RTKDYML++ TK LILTGYTDS+FQ DKD RKSTSGSVF LN GAV
Subjt: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
Query: VWRSVKQTCIADSTMEAEYVAACEAVWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQNIANP
VWR +KQ+CIADSTME EYVAACEAVWLRKFLTDLEIVP MHL ITLYCDNSG +AN RE RSHKR KHIERKY+LI++IVHRGDV+ TQIS +QNI +P
Subjt: VWRSVKQTCIADSTMEAEYVAACEAVWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQNIANP
Query: FTKALMAKVFEGHLEN
FTK L AKVFE +L++
Subjt: FTKALMAKVFEGHLEN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UB66 Gag/pol protein | 2.5e-116 | 93.69 | Show/hide |
Query: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWT+VKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQ DKDTRKSTSGS+F LNGGAV
Subjt: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
Query: VWRSVKQTCIADSTMEAEYVAACEAVWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQNIANP
VWRSVKQTCI +ST+EAEYVAACEAVWLRKFLT LEIVP MHLPITLYCDNSG IANLRELRSHKRGKHIERKY+LIRKIVHRGD+VVTQISFKQNIANP
Subjt: VWRSVKQTCIADSTMEAEYVAACEAVWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQNIANP
Query: FTKALMAKVFEGHLENLGLQCL
FTKALMAKVFEGHL+NLGL+CL
Subjt: FTKALMAKVFEGHLENLGLQCL
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| A0A5A7VS17 Gag/pol protein | 1.7e-101 | 83.63 | Show/hide |
Query: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
MRKI YASAVGS MYAMLC RPDIC+SVG+VSRYQSNPGRDHWT VKNILKYLRRTKDYMLV+ TK LILTGYTDSDFQMDKD RKSTSGSVF LNGGAV
Subjt: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
Query: VWRSVKQTCIADSTMEAEYVAACEA----VWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQN
VWRS+KQ+CI D+TMEAE+VAA EA VWLRKFLTDLE VP MHLPIT YCDNSG +AN RE R+HKRGKHIERKY+LIRKIVHRGDVVVTQIS KQN
Subjt: VWRSVKQTCIADSTMEAEYVAACEA----VWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQN
Query: IANPFTKALMAKVFEGHLENLGLQCL
IA+PFTKAL AKVFE HL++LGL+CL
Subjt: IANPFTKALMAKVFEGHLENLGLQCL
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| A0A5D3BRI6 Gag/pol protein | 1.1e-95 | 79.2 | Show/hide |
Query: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
MRKI YA AVGS MYAMLC RPDIC+SVGMVSRYQSN GRDHWT VKNILKYLRRTK Y+LV+ TK LIL GYTD DFQ DKD RKSTSGS+ LNGGA+
Subjt: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
Query: VWRSVKQTCIADSTMEAEYVAACE----AVWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQN
VWRSVK+TCI DSTME EYVAACE A+WLRKFLTDLEIVP MHL ITLYCDN+G +AN +E RSHKRGKHIERKY+LIRKIVHRGDVVVTQISF+QN
Subjt: VWRSVKQTCIADSTMEAEYVAACE----AVWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQN
Query: IANPFTKALMAKVFEGHLENLGLQCL
IA+PFT +L KVFE HL+NL L+CL
Subjt: IANPFTKALMAKVFEGHLENLGLQCL
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| A0A5D3DE27 Gag/pol protein | 6.6e-101 | 82.74 | Show/hide |
Query: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
MRKI YAS VGS MYAMLC RPDIC+SVG+VSRYQSNPGRDHWT VKNILKYLRRTKDYMLV+ TK LILTGYTDSDFQMDKD RKSTSGS+F LNGGAV
Subjt: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
Query: VWRSVKQTCIADSTMEAEYVAACEA----VWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQN
VWRS+KQ+CI D+TMEAE+VAA EA VWLRKFLTDLE VP MHLPIT YCDNSG +AN RE R+HKRGKHIERKY+LIRKIVHRGDVVVTQIS KQN
Subjt: VWRSVKQTCIADSTMEAEYVAACEA----VWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQN
Query: IANPFTKALMAKVFEGHLENLGLQCL
IA+PFTKAL AKVFE HL++LGL+CL
Subjt: IANPFTKALMAKVFEGHLENLGLQCL
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| A0A5D3DVT2 Gag/pol protein | 8.4e-96 | 80.56 | Show/hide |
Query: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
MRKI YASAVGS MYAMLC RPDIC+SVGM+SRYQSNPGRDHWT VKNILKYL+RTKDYML++ TK LILTGYTDS+FQ DKD RKSTSGSVF LN GAV
Subjt: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
Query: VWRSVKQTCIADSTMEAEYVAACEAVWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQNIANP
VWR +KQ+CIADSTME EYVAACEAVWLRKFLTDLEIVP MHL ITLYCDNSG +AN RE RSHKR KHIERKY+LI++IVHRGDV+ TQIS +QNI +P
Subjt: VWRSVKQTCIADSTMEAEYVAACEAVWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQNIANP
Query: FTKALMAKVFEGHLEN
FTK L AKVFE +L++
Subjt: FTKALMAKVFEGHLEN
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.7e-29 | 36.36 | Show/hide |
Query: SAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLI---LTGYTDSDFQMDKDTRKSTSGSVF-ILNGGAVVWR
S +G MY MLC RPD+ +V ++SRY S + W +K +L+YL+ T D L+F + GY DSD+ + RKST+G +F + + + W
Subjt: SAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLI---LTGYTDSDFQMDKDTRKSTSGSVF-ILNGGAVVWR
Query: SVKQTCIADSTMEAEYVAACEAV----WLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQNIAN
+ +Q +A S+ EAEY+A EAV WL+ LT + I + PI +Y DN G I+ HKR KHI+ KY+ R+ V + + I + +A+
Subjt: SVKQTCIADSTMEAEYVAACEAV----WLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQNIAN
Query: PFTKALMAKVFEGHLENLGL
FTK L A F + LGL
Subjt: PFTKALMAKVFEGHLENLGL
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| P0CV72 Secreted RxLR effector protein 161 | 6.3e-24 | 45.11 | Show/hide |
Query: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFV-TKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGA
M+ + Y SAVG+ MY M+ RPD+ +VG++S++ S+P HW +K +L+YL+ T+ Y L F L GY+D+D+ D ++R+STSG +F LNGG
Subjt: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFV-TKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGA
Query: VVWRSVKQTCIADSTMEAEYVAAC----EAVWL
V WRS KQ +A S+ E EY+A EAVWL
Subjt: VVWRSVKQTCIADSTMEAEYVAAC----EAVWL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.9e-43 | 43.5 | Show/hide |
Query: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
M K+ Y+SAVGS MYAM+C RPDI ++VG+VSR+ NPG++HW VK IL+YLR T L F IL GYTD+D D D RKS++G +F +GGA+
Subjt: MRKILYASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTKCLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAV
Query: VWRSVKQTCIADSTMEAEYVAACEA----VWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQN
W+S Q C+A ST EAEY+AA E +WL++FL +L + +YCD+ I + H R KHI+ +Y+ IR++V + V +IS +N
Subjt: VWRSVKQTCIADSTMEAEYVAACEA----VWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQN
Query: IANPFTKALMAKVFEGHLENLGL
A+ TK + FE E +G+
Subjt: IANPFTKALMAKVFEGHLENLGL
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.7e-22 | 33.18 | Show/hide |
Query: YASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTK--CLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAVVWR
Y VGS Y + RPDI Y+V +S++ P +H +K IL+YL T ++ +F+ K L L Y+D+D+ DKD ST+G + L + W
Subjt: YASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTK--CLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAVVWR
Query: SVKQTCIADSTMEAEYVA----ACEAVWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQNIAN
S KQ + S+ EAEY + + E W+ LT+L I + P +YCDN G H R KHI Y+ IR V G + V +S +A+
Subjt: SVKQTCIADSTMEAEYVA----ACEAVWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQNIAN
Query: PFTKALMAKVFEGHLENLGL
TK L F+ +G+
Subjt: PFTKALMAKVFEGHLENLGL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.3e-24 | 34.09 | Show/hide |
Query: YASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTK--CLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAVVWR
Y VGS Y + RPD+ Y+V +S+Y P DHW +K +L+YL T D+ +F+ K L L Y+D+D+ D D ST+G + L + W
Subjt: YASAVGSFMYAMLCIRPDICYSVGMVSRYQSNPGRDHWTIVKNILKYLRRTKDYMLVFVTK--CLILTGYTDSDFQMDKDTRKSTSGSVFILNGGAVVWR
Query: SVKQTCIADSTMEAEYVA----ACEAVWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQNIAN
S KQ + S+ EAEY + + E W+ LT+L I + H P+ +YCDN G H R KHI Y+ IR V G + V +S +A+
Subjt: SVKQTCIADSTMEAEYVA----ACEAVWLRKFLTDLEIVPIMHLPITLYCDNSGPIANLRELRSHKRGKHIERKYYLIRKIVHRGDVVVTQISFKQNIAN
Query: PFTKALMAKVFEGHLENLGL
TK L F+ +G+
Subjt: PFTKALMAKVFEGHLENLGL
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